Apaloderma vittatum (bar-tailed trogon): 104271607
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Entry
104271607 CDS
T08559
Symbol
GABRA1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04080
Neuroactive ligand-receptor interaction
avit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104271607 (GABRA1)
04082 Neuroactive ligand signaling
104271607 (GABRA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104271607 (GABRA1)
Ion channels [BR:
avit04040
]
Ligand-gated channels
GABA-A
104271607 (GABRA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
104271607
NCBI-ProteinID:
XP_009864627
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All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MQAMLMVIFLLVSEPTMKRLLVLCDCLWAWTLLLNALTERSYGQTSSQDELKDNTTVFTR
ILDRLLDGYDNRLRPGLGERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKF
KGPMTVLRLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRA
ECPMHLEDFPMDAHACPLKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQT
VDSGIVQSSTGEYVVMTTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTV
FGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAW
DGKSVVPEKPKKVKDPLIKKNNTYTAAATSYTPNIARDPGLATIAKSATIEPKEVKPETK
PAEPKKTFNSVSKIDRLSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgatgctgatggttattttccttctagtttcagagcccaccatgaagagactc
ctggtactttgtgactgcctctgggcctggacccttcttctgaatgcattgactgaaaga
agctacggacaaacctcatcacaagatgaacttaaggacaacaccacagtatttaccaga
atattggaccgtctgctggatggttacgataaccgcttgagaccaggactgggagagcgt
gtcactgaagtgaagactgacatcttcgtcaccagttttgggcccgtttcagaccacgat
atggaatacactatagatgtatttttccgccaaagctggaaagatgagagattaaaattc
aaaggacctatgactgttctccggttaaacaatttaatggccagcaaaatttggacaccc
gatacctttttccacaatggaaagaagtcggtggctcataacatgacaatgccaaataaa
ctattacgaattacagaggatgggacattgctctacacaatgagattgactgtgagagca
gaatgtccaatgcatttagaagactttcccatggatgcgcatgcttgccctttgaaattt
ggaagctatgcttataccagagcagaggttgtgtatgaatggacacgggaaccagcaagg
tcagtggttgtggctgaagacggctctcgattgaaccaatatgatctgcttggacaaact
gtggactctggaattgttcagtccagtacaggcgaatatgttgttatgactacacatttt
catttgaagagaaagatcggttactttgtcatccagacttacctgccatgcatcatgaca
gtgatactgtcacaggtgtccttctggcttaacagggaatctgtcccagcaaggactgta
tttggagtcacgactgtcctgacaatgaccactctgagcatcagcgcgaggaactctctg
cccaaggtggcctatgccacggccatggattggtttatcgccgtgtgctacgccttcgtg
ttttccgcactcatcgaatttgcaacagtgaattacttcacaaagagaggctacgcatgg
gatggcaaaagtgtcgttcccgaaaagccaaagaaagtgaaggatcctctcattaagaaa
aacaacacgtacacagctgcagctacgagctacacccccaatattgcaagggaccctggg
ctggcaaccattgctaaaagcgcaaccatcgagcccaaagaagttaagccagaaacaaaa
cctgcagaacccaagaaaacttttaacagcgtcagtaaaatcgatcgactatcaagaata
gccttccccttgctttttggaatctttaacctagtctattgggctacctatttaaaccgg
gagccgcagttgaaagctccaactccacatcaataa
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