Apaloderma vittatum (bar-tailed trogon): 104271776
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Entry
104271776 CDS
T08559
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04810
Regulation of actin cytoskeleton
avit05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104271776
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104271776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104271776
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104271776
Factors involved in mRNA localization
Other mRNA localization factors
104271776
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
COG2_C
zf-CW
BP28CT
LRIF1
Motif
Other DBs
NCBI-GeneID:
104271776
NCBI-ProteinID:
XP_009864861
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAYIMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMTESLNSAELLKQLKSLGLEKLLHVTHKFLRQSYTY
PPLLNFGETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMME
YVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKIMAGSLL
LDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSMEL
AIGRFESEDLTSIVELDGLIEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSSIY
SNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRL
PRHEYGSP
NT seq
2905 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaggtaacactggaggatgccttgtccaatgtggatctcttggaagaatta
ccactgccagatcagcaaccatgtattgaacctccaccatcatctctgctttaccagcca
aacttcaacacaaattttgaagacagaaatgcgtttgtcactggcattgcaagatacatt
gagcaagctacagtccattctagcatgaatgaaatgctagaagaaggtcaggaatatgca
gtcatgttatacacatggagaagctgctcaagagccattcctcaggtcaagtgcaatgag
cagcctaacagagtagaaatttacgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaatgcgattgaacggttttgtggggaggtg
agacgcttgtgccatgcagagaggaggaaggactttgtgtctgaagcatatctgatcacg
ctgggcaaattcatcaacatgtttgcagtgttggatgagttgaaaaatatgaagtgcagc
gtgaagaatgaccattcagcctacaagcgtgctgctcagttcttgcggaaaatggcagat
cctcagtccattcaagaatcccagaacctctccatgttccttgccaaccataacaaaatc
acacaatctttgcagcagcagttggaggtgattgttggctatgaagagctgcttgcagat
attgtgaatttgtgtgtggactactatgaaaacaaaatgtatctaacgcccagtgagaaa
catatgcttttgaaagttatgggctttggattgtacctgatggatggaagcgtcagtaac
atctataagctggatgcaaagaaaaggataaatttagcgaagatagacaagttctttaag
cagttgcaggttgttccactctttggtgacatgcaaattgaacttgcaagatacattaag
accagtgcccattatgaggaaaataaatccaggtggacatgcacgtcttccagcagcagt
ccccagtacaatatatgtgagcagatgatccaaatcagagaagaccatatgcgtttcata
tcagaactggctcgttacagcaacagtgaggtggtgactggatctggtcgacaggaagct
caaaagacagatgcagagtatcggaagctctttgatctctctctccaaggcctgcagctt
ctctcccagtggagcgcatatatcatggaagtgtattcatggaagctggtacatccaact
gacaaatattctaataaagattgtcctgacaatgcagaagagtatgaaagagcaacaaga
tacaattatactagtgaggagaagtttgcgttggttgaggtgattgctatgatcaaaggt
cttcaggtgttgatgggaaggatggagagtgttttcaatcatgccattcgccataccatt
tatgcagctcttcaagactttgcccaggttacactcagagagcctttaagacaagccatt
aaaaagaagaagaatgtcattcagagtgttttgcaggccatcaggaagacagtctgtgac
tgggaagcgggtcatgagccgttcaacgacccggctctgaggggagagaaggaccccaaa
agtggttttgacatcaaagtcccaaggcgtgcagtgggaccctccagcactcagctctac
atggttcgcactatgacagagtccttaaactctgccgagctgttgaagcagctcaagtct
ctgggactggaaaagctattgcatgtgacacacaagtttctgaggcagtcctacacctat
ccgcctcttttaaactttggtgaaaccctgcagcagtgctgtgatctgtctcagctgtgg
ttcagggaattcttcttagagctgaccatgggcagaagaatccagtttcccattgagatg
tccatgccttggattctgacagaccatattttggagaccaaagaggcatcaatgatggag
tatgttctgtattctttggacctttataatgacagtgctcattatgcacttactaaattt
aagaagcagttcctctatgatgagattgaagcagaggtaaacctgtgttttgaccaattt
gtctacaagctggcagaccaaatatttgcgtactacaagataatggctggcagcctactt
ctggataaacgattacgttcagaatgcaagaaccaaggagcaaccattcagttgctacag
tccaaccgctacgagacgctgctgaaacagaggcatgtccaacttcttggtaggtcaata
gacctgaaccgactgatcactcagcgaatttcagcggccatgtacaggtccatggaactg
gcaatcggtcgatttgaaagcgaggatttgacttccattgtggagctggatggcttgata
gagataaacaaaatgactcataagctgctgagtagatacatgaccttggacagctttgac
gccatgttcagagaagccaatcacaacgtgtcagccccttacggaagaatcactcttcat
gtcttttgggaactgaattacgatttccttccaaactactgctacaatggatccactaac
agatttgttcggaccgtgctaccgttttctcaggagtttcagagagataagcagcctaat
gcacagccgcagtatctctatggatcgaaggcattgaatctggcatattccagcatctac
agcaactacaggaattttgtcggtccccctcactttaaagtcatctgtagacttctcgga
tatcagggtattgctgtggtgatggaggagttgctgaaagttgtcaagagtctgttacaa
gggacgattcttcagtatgtcaagaccctaatggaggtgatgcccaagatctgtaggttg
ccgagacatgagtacggttctccag
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