Apaloderma vittatum (bar-tailed trogon): 104271850 Help Entry 104271850         CDS       T08559                                  Symbol FOCAD Name (RefSeq) focadhesin   KO K27498   focadhesin Organism avit  Apaloderma vittatum (bar-tailed trogon) Brite KEGG Orthology (KO) [BR:avit00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:avit03019]     104271850 (FOCAD) Messenger RNA biogenesis [BR:avit03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      104271850 (FOCAD) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Focadhesin DUF3730 MOM1 Motif Other DBs NCBI-GeneID:  104271850 NCBI-ProteinID:  XP_009864961 LinkDB All DBs Position Unknown AA seq 1170 aa AA seqDB search VVCIRSTWNALSPKLSCDTRPCILKALNELFALVPSLTVNTNEYEKFKAQVISFLWNNTQ NEDSVVAISAYKSLSSFGSEEHTILHLPEQARPEVESLGEADMNEDEDDKEADLLVPGSS YIKLLSLTPASVLGAFEEFAASLVKQEMTNMPRGVYHSALRGGTTRSDRGKTMAXXXXXX XXXXXLLKAYERNKQPGMTPGLAACMLSCYDLPVHVGKDGKPINRFLASRGRNFQQMLVA LLHEVNIQPSEWHRSILLPQSWLGFMNRTYSAVLQGRQAELEMQLKHGKEDPEEVQYKQF TAWVWVRDMLTDVIKGASKDSPVVKGNSIFALTALAVAVAKYESSLSSDTEGMPETEPGF LPTKHWISMVTETLLSIVNSRYQPKGQVFPWFYQKSYSGENTASIIARSCAATALSLLVP IFIILCKEKIEEVLNMLTDRLPGKPNADESQAVQIHMGLGLGMFISRLYEEKVSDVPSQQ MNLVLLKSLDALEDCCFDTSLEYNTGCILGVGLVLSLMSHSSQTESRVHVSASLRKLCKY LNSSEDQSRSVQEVLAYSVACSCVSAFSVGIIEAAEAEEAMNKLRTLVENNQQTHSFALA LGAVVHGLSACGHGKAEDLSNRLMPAWIKIVLAEGSPTMQRLAAVNGLVALVGSEGGVIQ LKSESIQSSQFQSKLNEVIRTLTQIISFSGQIGLQTNAAVLLGCLYNTSCLSSTQGRASV PPDFSYLPENSFIRAAIDFAIESGKKGPESVPAELVKVALAPIASVAESHQYPPVNWSSI LSPLMRLNFGDEVKHLCLQLVVTQAQSSQNAAVLLGMWVAPPLVYSLSMKTQKYLVLSLP LWMKHVAEDKIQSFTEVFVMQQFEVKNRTKNPEICQCVLQGFTQAMKLLNPAQYCWSSLC HAVEKIFELLPDEIQRGNLEMYVDLAKCISEMADSEVDRIVQITKSNIEKATFTKVYLIS QGRLPLMTLSSVIDTVAGYLQKENILWMLLQGFYHARIVSHENTGVLKRMNWLLDLMGYI RNLAYKSIPLKNVDLKECIDFLLWVFAASVVAWADHGAPLLLGLSANWSLWKHQTVLSEL SEVHIGKHPADKLALQETLTLLPSSISLLLAKEPWKEQTQKFIDWLIHMMESPKEALSES SADLLKVTLLALRSVAEFKKKAVWTKAYGW NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt gttgtttgcatccgttctacatggaatgctctgtcaccaaagctgagttgtgatacaaga ccctgcattttaaaagcactgaatgaattgtttgccctggttccgtcattgacagtgaat acaaatgagtatgagaaattcaaggctcaggttatcagcttcctttggaacaacacacaa aacgaggattctgtggtagctatttcagcctataaatcactctcgtcgtttggctctgaa gaacatacaattcttcatcttcctgaacaggcacgaccagaagttgagtcactaggggag gcagacatgaatgaagatgaagacgataaggaggcagatcttcttgttccaggttcttca tatatcaagctgttgtcgctaacaccagcttctgttttaggagcatttgaagagtttgca gcatcacttgtgaaacaggagatgacaaacatgccccgtggtgtatatcattctgcctta agaggagggaccacacgctcagaccgagggaagaccatggcaannnnnnnnnnnnnnnnn nnnnnnnnnnnnnncctgctgaaggcttatgagaggaacaaacaaccaggcatgactcca ggccttgcagcgtgcatgttgtcctgttacgaccttcctgtccatgtgggcaaggacggc aagcccattaaccgatttctggccagcaggggtcgcaatttccagcaaatgttggtggcc cttcttcacgaggttaacattcagccttctgaatggcaccgctccatactgctgccacag tcctggttaggatttatgaaccgaacttacagtgcagtactgcaggggaggcaggcagag ctggagatgcaattaaaacatggaaaagaggatcctgaagaggtgcagtacaaacaattt acagcctgggtctgggtcagagatatgttgactgatgtcatcaaaggtgcctccaaagac agtccagtggtgaaaggaaactctatttttgccttaactgctcttgcagttgctgtagcc aaatacgaaagcagcctttcctcagacactgaaggaatgcctgagactgaacctggtttt cttcccacaaagcactggatttctatggtcacagagactcttcttagtattgtgaatagc cgttatcaacctaaaggtcaagtcttcccatggttctaccagaaatcctattcgggtgaa aatactgctagtattattgcccgctcctgtgcagccactgctttgtctctcctggtgccg attttcattatattgtgcaaggagaagattgaggaggtcctgaatatgctgactgacagg ttacccgggaaaccaaatgctgatgagtctcaggctgttcaaatccacatgggccttggt ttaggcatgtttatctcacgtttgtatgaagaaaaagtcagtgatgtacccagtcaacag atgaacttagttctcctgaagtccctggatgcactggaagactgctgttttgacaccagt ctggaatacaacactggatgtattttgggagtaggacttgttctttcacttatgagtcac agcagtcaaacagaatcgcgagtgcatgtctctgcttcattgcgaaaactctgcaaatac ctgaacagcagtgaggaccaaagcagaagtgtccaggaggtacttgcctattctgtggcc tgttcctgtgtctcggctttcagtgttggaatcatagaagcagctgaggctgaggaggcc atgaacaagctaaggaccttagtggaaaataatcagcagacccacagttttgctttagct ctaggtgcagtagtacatggactgtcggcttgtggtcatggaaaagccgaagacctgagt aacagactaatgccagcctggataaagattgtacttgcagagggttctccaacaatgcag cgtctggctgctgtcaatgggctggttgcactggtgggttctgaaggaggtgtgatacag ctgaagtctgagagcattcagtcttcccagtttcaaagtaaactgaatgaagtcatcagg acccttacacagataatcagtttttcggggcagattggccttcagacaaatgcagcagtg cttttgggatgcctttataatacatcgtgcttgtcttctacccagggcagggcatctgtt cctccagattttagctacttgcctgaaaacagctttatcagggcagccattgactttgcc attgaaagtggaaaaaaaggccctgaatcggttccagctgaactggtgaaagtagcactg gcacccattgcatcagttgcagaaagccatcagtatccacctgtaaactggtcatccatt ctttctcctttgatgaggctaaactttggtgatgaagtaaaacatctctgccttcagctg gtggtgacacaggcccagtcatctcaaaatgcagcagtgcttttgggaatgtgggtggca cctccccttgtctacagtctcagtatgaaaacccagaaataccttgtcttgtcccttcct ctgtggatgaaacatgttgcagaggacaaaatacagtcttttacagaagtatttgtgatg caacaatttgaagtgaagaaccgcacaaaaaacccagaaatttgccagtgtgttttacag gggttcacacaggcaatgaaacttctaaaccctgcccagtactgctggagctctctgtgc cacgctgtggaaaaaatatttgagcttctaccagatgagattcaaagagggaatctggag atgtatgttgatctggcaaaatgtatctcggaaatggctgattcagaggttgatcgcatt gtccagattactaagagtaatatagagaaggccacattcacaaaagtgtacttaatttct caaggcagactgcctctgatgaccctaagttctgtgattgatactgtggcaggatatctt cagaaagaaaatattttatggatgctcttgcagggtttctatcatgctcggattgtgagc catgaaaacacaggagtgctgaaaaggatgaactggctactagacctgatgggctacatc agaaatctagcgtacaagtcaatacccttaaaaaatgttgatcttaaagagtgcatagat tttctcctgtgggtgtttgcagcttccgtggtggcctgggctgaccatggtgcaccacta ctgcttggcctcagtgctaactggtcactgtggaagcaccaaactgtcttatcagaatta tctgaggttcacattggcaagcaccctgctgacaaacttgctctgcaagagaccctcact ctacttccaagcagcatttcccttttgctggctaaagagccctggaaagagcaaacacag aagtttattgactggctgatccatatgatggaaagtcctaaggaagcattatcagaatct tcagcagacctgttgaaagttacccttctggccttgagatctgttgcagagttcaagaag aaagcagtgtggactaaagcttatggatggtag

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