Apaloderma vittatum (bar-tailed trogon): 104271946
Help
Entry
104271946 CDS
T08559
Symbol
USH1C
Name
(RefSeq) harmonin
KO
K21877
harmonin
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
avit03037
]
104271946 (USH1C)
Cilium and associated proteins [BR:
avit03037
]
Primary cilia and associated proteins
USH complex and associated proteins
104271946 (USH1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
104271946
NCBI-ProteinID:
XP_009865094
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MCYINEWPKRFLKTFIQQYSDYQVNLLIDNEAEKDYLYDVLRMYHQSMNLPVLVGDLKLV
INEPSRLPLFDAIRPLIPLKHQVEYDQLTPKRSRKLKEVRLDRLHPEGLGISVRGGVEFS
CGLFISQLVKGGQADNVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKIVSIKVRHVGM
IPVKSSADEPLKWQYVDQFVSDSGGSVAGLASSGGRDNKEKKVFISLIGTKGMGCSISSG
PTQKPGIFISNVKPGSLSAEVGLEVGDQIVEVNGVDFSNVDHKEAVRVLKSSRTLTISVV
AGAGKELFMTEEERQREERLREQERQELMHQKRLALETNKIIKEQQEKERLRKLEISQKA
AEEEERYRREIEQITAEEEKFKKEWEEDWGPKEPPKSVQTVTAEVHSAPHSKHKSFGWFY
RYEGKFPTIRKKGRKKSKSDSLCEQKKNKKEMEFEQKLAKEKEGMLEKEKQLKINRLVQE
VSETEREDLEESEKVQHWVERLCQTRLEQISSVENESPELTSGRPAASPSATSMRRFAGG
LQLHTTDLDDINLDEVDKPKQRVAPPPPPTVTPASSAHPLPTPNVPLSRGPALAVTPAPQ
QLAPSPPTQRHPGVPVVSKPVMLHPDPNFMVRPTIKSEALPQEMFKRMVVYNSSFRSNKK
QGFQKYLEDFDPYSMFSPEQIMGKDVRLLRIKKEGSLDLAVEGGIDSPIGKIVVSAIYEG
GAADKHGGIVKGDEILAVNGKILIDSRLAEAQATLARAWNMGGDWIDLVIAASPPKEYDD
EM
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgtgctatattaatgagtggccaaagaggtttctgaaaacatttattcaacagtacagt
gactatcaggttaatctactaattgacaatgaagcagagaaggattacctttatgatgtg
ctgcggatgtaccaccaatctatgaatctcccagtgcttgtgggggacctgaaacttgtg
attaatgaaccaagcaggttgcctctatttgatgctatccgcccgcttatcccgctaaaa
caccaggtggaatatgaccagcttacacccaaaagatcacgaaagctgaaagaggtgaga
ctggatcgtttgcatcccgaaggacttggaataagtgtgagaggtggagtggaatttagc
tgtggcctcttcatctcccagttagttaaaggaggacaggcagacaatgttggacttcag
gttggagatgagatagttcgtataaatggatattccatttcatcgtgcacacacgaagaa
gtcataaacctaattcgcacgaagaaaatagtgtccataaaagtaagacatgttggcatg
atacctgtaaaaagttcagcagatgaaccccttaaatggcaatatgtggaccagtttgtg
tcagactctgggggcagtgttgctggtcttgcttcttcaggaggaagagacaataaagag
aagaaagtcttcattagcttaatcggtacaaaaggcatggggtgcagtatttccagtggt
ccaacacagaaaccaggcatttttatcagcaatgttaagccgggttctctttcagcagag
gtgggcttagaggtcggtgatcagattgttgaggtaaatggagtagacttttctaatgtg
gatcataaagaggctgtcagagtgctcaaaagtagtcgaactttgactatctctgtggta
gcaggcgctggaaaggagctgtttatgactgaagaagaaaggcagagagaagaacgtctc
cgtgagcaagagcgacaggaattaatgcatcagaagcggcttgcgctggaaacaaacaaa
atcatcaaagaacagcaagagaaagagagattaagaaaactggagatttcccagaaggct
gcggaagaagaagagagatatcgcagagagatagagcagataacagcagaagaagagaag
tttaaaaaggaatgggaagaagactggggtcctaaagaacctcccaaatctgtacaaact
gttactgcagaagtgcactctgcccctcattccaaacacaaatcttttggatggttttat
cggtatgaaggaaaatttcccacaattcgcaagaaagggagaaagaagtcaaaaagcgat
agtctgtgtgagcagaagaagaataaaaaggaaatggaatttgagcaaaaacttgctaaa
gaaaaagaaggaatgttggagaaagagaaacaactgaaaataaatcgtcttgtgcaagag
gtatctgagacagagcgagaagatctggaagaatcagaaaaggtgcagcactgggtggaa
agactttgtcagacacggttagaacagatttcctctgtggagaatgaatctcctgagctg
acaagcggacgtcctgccgcttctccttctgccacatcaatgcggcgttttgccggtggc
ctgcagcttcataccacggatctcgatgatataaacttagacgaagttgacaagcctaaa
caacgtgtggcaccaccaccaccacccactgttactccagcatcatcagctcatccactt
cctacaccaaatgttccactttcaagaggtccagccctggcagtaacaccagctccccag
caacttgctccaagtccacctacccagcgccatccaggggtaccagtagtctctaaacca
gtcatgctgcatcctgacccaaactttatggtcaggccaacaatcaaatcagaggccttg
ccacaagagatgtttaaaaggatggtggtttacaattcatcatttagatctaacaaaaaa
caaggcttccagaaatacttggaagattttgacccatattcaatgttttccccagagcag
attatgggaaaagatgtacgactgttacgaattaaaaaggaaggatcgttagaccttgca
gttgagggaggaattgattctccaattggaaagatagtcgtgtctgccatctacgagggt
ggtgctgcagacaagcatggaggcatagtgaaaggggatgaaatactagctgtaaatggc
aagatactaattgacagcaggctggcagaagcacaggcaactctagcaagagcttggaac
atgggtggggattggattgacttagtcattgcagcatcacctccaaaggaatatgatgat
gaaatgtaa
DBGET
integrated database retrieval system
