Apaloderma vittatum (bar-tailed trogon): 104272069
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Entry
104272069 CDS
T08559
Symbol
ITGB4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04382
Cornified envelope formation
avit04510
Focal adhesion
avit04512
ECM-receptor interaction
avit04518
Integrin signaling
avit04810
Regulation of actin cytoskeleton
avit04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104272069 (ITGB4)
04518 Integrin signaling
104272069 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104272069 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104272069 (ITGB4)
04810 Regulation of actin cytoskeleton
104272069 (ITGB4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104272069 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avit04147
]
104272069 (ITGB4)
04515 Cell adhesion molecules [BR:
avit04515
]
104272069 (ITGB4)
04090 CD molecules [BR:
avit04090
]
104272069 (ITGB4)
Exosome [BR:
avit04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
104272069 (ITGB4)
Exosomal proteins of bladder cancer cells
104272069 (ITGB4)
Cell adhesion molecules [BR:
avit04515
]
Integrins
Integrin beta subunits
104272069 (ITGB4)
CD molecules [BR:
avit04090
]
Proteins
104272069 (ITGB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
PSI_integrin
EGF_integrin
I-EGF_1
EGF_Teneurin
EGF_TEN
EGF_2
Fn3_PBP1
vWA_SIBA-E
SEA
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
104272069
NCBI-ProteinID:
XP_009865262
LinkDB
All DBs
Position
Unknown
AA seq
1794 aa
AA seq
DB search
MDVLPRVCAGLLLLCLLCATGLCQGSKSNRCVLSRAKSCTECIRVDKDCSFCTDESFEEP
RCDLRENLLRYGCGEASIVYTRGEMQTQQNFSINTVLQRTQVSPQSMFIRLRAGEEMNFN
MDVFQPLESPVDLYILMDFSYSMSDDLDNLKSMGQNLAEFLHALTSNYTIGFGKFVDKVS
SPQTDMRPEKLREPWNNADSPFSFKNVIRLTSNINYFSQELRKERISGNLDAPEGGFDAI
LQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDTNGTYVYD
TKQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSNIVELL
RTAFERIRSKMDIRADFVPKAMKTEFTSSMYEKTESGSFHITRGEVGKFNMHVKALEYVG
GQHVCSLPEKDRQGGIHVKPTSLSDSLKVTASVICDVCPCEQQQEFNSPKCSFHGDFACG
QCICHPGWXGLHLAPNNRACLRPGDTEPCSGRGECLCGKCQCYSEDLTQRFDGAFCQYDV
LRCPRTSGFLCNDRGRCSKGACVCESGWEGPSRECPTNNDTCIDSRGGICNNHGRCECGR
CVCDKASLYTSSTCEISYSLGFQAMCESIRDCVRCQAWGTGSTKGNCSACHLQIQMVEEL
KKEEAAEYCSFQDEEDDCTYRYTLEGDPSVLPNTTVHVQKKKECPPGSFLWLIPLLIFLI
LLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSSDHLDTPMVRSG
SLKGRDTVRWKINNNVHKQGFTSLAAANPKDLIPYGLSLRLTRLFTQNLVKPDTRECEQL
RKEVEENLNEVFKHIPGCHKLQQTKFRLQPNSGKRQDHTIVDTVLTAPRSAKSEIIKVME
KHVSHEAFNDLKVSPGYYTVTSDQDAHGMVEFQEAVELVDVRVPLFIREDDDDEKQLQVE
AIDVPNGIAVIGRKIVNITIIKEQASSLITFLQPAYSHSRFDKLAKIPVLREIIDSGKSQ
VTYRTRDLTAKNGRDYVFTEGDLVFQPGETRKEVQVPLLELTEIDTLLHNSQLKQFAIDL
LHPKYGAKIGRYPQTTVTIADPEVVDGVPSMSQLSQSPKGRLSAPLNPNAHALSSREIRF
NWFPPPGKPLGYKVKYWIQGDPESDAHVIDVKSPSAELSNLYPFCDYEMQVCAYNAMGEG
AYSDIIHCRTLEDVPSEPGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVSYGLVNEDNV
PIGPVKKVLVEDPKKRMVLIENLRESQPYRYMVKARNGAGWGPEREATINLATQPKRPMS
IPIIPDVPIIDAEGGEDYDSYLMYSTDVLRSQAGSKHPSVSDDSGSRWKYVQLLGEDLDL
RRITWRLPPETIPRLSGSSRFSSDTEGLLHEEDSDVATSSLRRSGTPRPQAEHLLNGRVD
FSYPGSGSGTLTRTTNTSYHQLSSHMQQEHRVMGSSSLTRDYSMTLMGHDSRLPLGVPDT
PTRLVFSALGPTSLKVSWQEPHCEKEVQGYSVQYQLLNGGEVHRLTIPNPSQNSVVVEDL
LPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGSPFTLSTPSAPGPLVFT
ALSPDSLQLSWERPRKPNGSILGYMVTCEMLHGGGEPRNIYVEGDNPETTLTVPHLSENV
PYKFKVQAKTTQGFGPEREGIITIESQDGGTFSQFGGQQYMREVYNFPTEYTTKTSISHS
SLDPHFTDGVLMTTQRVESASSTLTKQVTKEFVSRTMMSSGTLTKQMERQFYEA
NT seq
5385 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctgccacgggtgtgcgctgggctgctcctcctgtgcctgctctgtgccacc
ggcctctgccaagggagcaaaagcaaccgctgtgttctgtcccgggcaaagagctgcacc
gagtgcatccgagtggacaaggactgctccttctgcaccgacgagagctttgaagagcct
cgctgcgacttgcgggagaacttgctgcgctacggctgcggggaggccagcatcgtctac
actaggggcgagatgcagacccagcagaatttcagtatcaacacagtcctgcaaaggacc
caggtgtccccccagagcatgttcattcgtctgcgagctggggaggagatgaacttcaat
atggatgtcttccagcccttggagagccctgtggacctctacatcctcatggacttctca
tactctatgtctgatgatctggacaacctcaaaagcatgggccaaaacctagcggagttt
ctgcatgccctgacctccaattacactattggattcggcaagtttgtggacaaagtctca
tcccctcagacagacatgagaccggagaagctgcgtgagccctggaacaatgctgactcc
cccttctccttcaagaacgtcatccgcctgaccagcaacatcaactacttcagccaggag
ctgaggaaggagcgcatctccggcaacctggatgcccccgagggcggctttgatgccatc
ctgcagacagctgtttgcaaggataagattggctggaggaaggacagcactcacctactc
gtgttctccaccgaatctgcctttcactatgaagctgatggtaccaacgttctggcaggg
atcctggcgagaaacgatgagcagtgtcacctagacaccaacggcacctacgtgtatgac
accaagcaggactatccttcggtgcccaccctggtgcgcctgctgggccaacacaacatc
atccccatctttgctgtcaccaaccactcctacagctactatgagaagctgcacaagtat
ttccccatctctgagatcggggtgctccaggaggactcttccaacatcgtggagctgctc
cgcacagcctttgagcgcatccgctccaagatggacatccgggccgactttgtccccaaa
gccatgaagacagagtttacctcctcgatgtatgaaaagacagaatctggctccttccac
atcacccgtggggaagtgggcaagttcaacatgcacgtgaaggcccttgagtatgttggg
gggcagcacgtctgcagccttcccgagaaagaccggcagggaggcatccatgtgaaaccc
acgtccctgagcgacagcctcaaagtcacggcctctgtcatctgtgacgtgtgtccttgt
gaacagcaacaagagtttaactcccccaagtgcagcttccatggggactttgcttgtgga
caatgcatctgccacccaggctggtaaggacttcatctagcccccaacaaccgagcctgc
ctccgccccggggacacggagccgtgctcgggccggggcgagtgcctgtgcgggaagtgc
cagtgctactccgaggacctgacccagcgcttcgacggcgcgttctgccagtacgacgtc
ctgcggtgcccgcgcacctccggcttcctctgcaatgatcgtggtcgctgttccaagggc
gcatgtgtgtgcgagagtggctgggaggggccaagccgcgaatgtcccacgaacaacgac
acctgcatcgacagccgagggggcatttgcaataaccacgggaggtgcgagtgtggccga
tgcgtttgtgacaaggcttcgctgtacaccagctccacctgcgaaatcagctactccctg
ggcttccaggccatgtgcgagagcatccgagactgcgttcgctgccaggcctggggaacc
ggcagcacgaaagggaactgcagtgcgtgccacctccagatccagatggtggaagagctg
aagaaagaagaggccgctgagtactgctccttccaggatgaggaggacgattgcacgtac
cgctacaccctggagggagaccccagcgtcctccccaacaccactgtccatgtgcagaag
aaaaaagagtgcccgcccgggagcttcctctggctcatcccgctgctcatcttcctcatc
ctcctcctggggctgctcctgctgctctgctggaagttctgtgcttgctgcaaggcttgc
ctggccctgcttccctgctgtgcacgaggtcgcaccgttggcttcaaggaggaccactac
atgcttcgtcacagcctcatgtcctccgaccacctggacacccccatggtccgcagtgga
tctctcaagggtcgggatacagtccgctggaagatcaacaacaatgttcacaagcagggc
ttcacctccctcgctgccgccaaccccaaagatctcattccctacgggctgtctctgagg
ctgacccggctcttcacgcagaacctggtgaagccagacacacgggagtgcgagcagctg
cgcaaggaagtggaggagaatctgaacgaggttttcaagcacatccccggctgccacaag
ctccagcagaccaagttcaggttacagcccaattctggaaaaaggcaggaccacaccatt
gtggacacagtgctcactgcccctcgctcagccaaatccgagatcatcaaggtgatggaa
aagcacgtttcccatgaggctttcaatgatctgaaggtttcgccaggttattacactgtg
acctcggaccaagatgctcacgggatggtggagttccaagaggccgtggagctggtggat
gtccgtgtcccgctttttatcagggaggatgatgatgatgagaagcagctgcaggtagag
gctattgatgtccccaatggcatcgcagtgattggacgcaagattgtcaacatcaccatc
atcaaagaacaagccagcagcctcatcacctttttgcagccagcctattcccacagccgc
tttgataagctggccaagatccctgtcctccgcgagatcatagacagcgggaaatcccaa
gtcacctacaggacccgggatctcaccgccaagaacggcagggactacgtcttcacagag
ggtgacctggtcttccagcctggggagacccgaaaagaggtgcaggtccctttgctggag
ctgaccgaaatagataccctcctacacaacagccagctcaagcagttcgccatcgacctc
ctccatcccaagtacggcgccaagatcggccgatacccccagaccacggtgaccatcgcc
gacccagaggtggtggatggtgtcccctcgatgagccagctctcgcagtcccccaaaggc
cgcctgagtgcacctcttaatcccaatgcccatgctctcagctccagggaaatccgcttc
aactggtttcctccaccgggaaaacctctgggatacaaggtgaaatactggatccaaggg
gacccggagtcagatgcccatgtcatcgatgtcaaatcaccatcagcagagctgagtaac
ctctaccccttctgcgactacgagatgcaagtctgtgcttacaatgccatgggtgaaggg
gcttattctgacatcatccactgccgcacgcttgaagacgtccccagtgagcctggccgc
ttggctttcaatgtcgtgtcttccaccgtgacacagctgagctgggctgagcctgcagaa
accaatggggagatcacggcttatgaagtcagttacggactcgtcaatgaggacaatgta
cccattggcccagtgaagaaggtgttggttgaagacccaaagaagcgcatggtgcttata
gaaaacctgcgggagtcccagccctaccgctacatggtgaaggccaggaatggggctggc
tggggacctgagagagaagccaccatcaaccttgctacacagcccaaacgcccaatgtcc
atccccatcatccctgacgtccccatcatcgatgcagagggaggtgaggactacgacagc
tacctgatgtacagcacagatgtgcttcgctctcaagctggcagcaagcatcccagtgtc
tctgatgactcaggctccaggtggaaatatgtgcagttgctgggagaagacttggatctt
cgccgcatcacctggaggctcccacctgaaaccattccccgcctctctggcagcagtcgc
ttctcctcggacactgagggtctcctccacgaggaggacagcgacgtggctaccagcagc
ctgaggaggagcgggactccccggccccaagcagagcacttgctgaatggccgggtggac
ttctcctaccctggcagtggcagtggcacactgaccaggacaacgaacaccagctaccac
cagctgagctcacacatgcagcaggagcacagggtgatggggagctcctcgctgaccaga
gactactccatgacactgatggggcacgactccaggctgcctctgggtgtccccgatact
cccacacgcctggtgttctctgccctgggacccacctccctgaaggtgagctggcaggag
ccgcactgcgagaaggaggtgcagggctacagtgtgcagtaccagctcctcaacggagga
gaggtgcacagactcaccatccccaaccccagccagaactcagtggtggtggaggacctg
ctgcccaaccactcctacatcttcaaggtgaaggcgcagagcgaggaaggctggggcccc
gagagggaaggagtcatcaccatagagtcccaggtggacccgcagagcccactcagccct
gtaccaggttcacccttcacactgagcacacccagtgctcctggaccactggttttcacc
gccctcagccccgactccctgcagctcagctgggagagaccccgcaagcccaatgggtcc
atcttgggctacatggtcacctgtgagatgctgcatggcggaggggagcccaggaatatc
tacgtcgaaggagacaatccagaaactaccctgactgtgccccacctgagtgagaatgtc
ccatacaagttcaaagtgcaagccaagaccacccaaggctttgggccagagagagaaggc
atcatcaccatcgaatctcaggatggaggcactttctcccagtttggaggacagcagtac
atgagagaagtgtacaacttccccactgaatacaccaccaaaaccagcatcagccattcc
tctctggatccccacttcacagacggcgtgctgatgacgacccagcgagtggagagcgcc
agcagcaccctcaccaaacaggtcaccaaagagtttgtgagccggaccatgatgtccagc
gggacgctcaccaaacagatggagaggcagttctacgaagcctga
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integrated database retrieval system
