Apaloderma vittatum (bar-tailed trogon): 104272194
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Entry
104272194 CDS
T08559
Symbol
GABRA6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04080
Neuroactive ligand-receptor interaction
avit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104272194 (GABRA6)
04082 Neuroactive ligand signaling
104272194 (GABRA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104272194 (GABRA6)
Ion channels [BR:
avit04040
]
Ligand-gated channels
GABA-A
104272194 (GABRA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Cyclin_N
CytochromB561_N
DUF4396
Motif
Other DBs
NCBI-GeneID:
104272194
NCBI-ProteinID:
XP_009865425
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
FGPVSDVEMEYTMDVFFRQTWTDERLKFSGPTEILRLNNLMVSKIWTPDTFFRNGKKSIA
HNMTTPNKLFRIMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYPKSEIIY
TWKKGPLHSVEVPQESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKMGYFMIQ
IYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYATAMDWF
IAVCFAFVFSALIEFAAVNYFTNLQTQRAMRKAARAAALAAALSAATVPAEDEIVSHSDS
NCNLKKRVNSIISQADQSPEASIISNTASQCQPAPVPPPAPPPAIGGTSKIDQYSRILFP
VAFAGFNLVYWVVYLSKDTMEV
NT seq
1147 nt
NT seq
+upstream
nt +downstream
nt
ttcgggcccgtgtccgacgtggagatggaatacacaatggatgtcttctttcggcagacg
tggactgatgagaggttgaagtttagtgggccaactgaaattttgagattgaacaattta
atggtcagtaaaatctggacaccagacacattttttagaaatgggaaaaaatcaattgct
cataatatgacgactcctaacaaacttttcagaattatgcagaatggaactattctttac
acaatgagactaaccattaatgctgattgtcctatgcggttggtgaacttccctatggat
ggacatgcttgtccactgaagtttggaagctatgcttatccaaaaagtgaaataatttat
acatggaaaaagggacccctgcactcagtggaagtaccgcaagagtcttccagtctcctc
cagtacgatctcataggacaaactgtatctagtgaaacaattaaatctaacacaggtgaa
tatgtaatcatgaccgtttatttccacttgcaaaggaagatgggctacttcatgatacag
atatacactccctgcatcatgacagtcattctttctcaggtgtccttctggattaacaag
gagtctgtcccagccaggacggtttttggaatcactacagtgctaaccatgaccactctc
agcatcagcgcacgccattctttgcccaaggtgtcctatgctaccgccatggattggttc
atagctgtgtgcttcgccttcgtcttctcggcacttattgagtttgcagctgtcaactac
tttaccaaccttcagactcagagagcgatgaggaaggcagccagggcagcagcactggca
gcagcactatcagcagcaactgtaccggcagaggacgagattgtctcgcattctgactcc
aactgtaacctgaagaagcgagtgaactccataatatcgcaggcagaccagtctcctgaa
gccagcatcatatcaaacactgcatcccagtgtcaaccagcgcccgttcctcccccagcc
ccaccaccagctattggaggcacaagtaaaatagaccagtactccaggatcctcttccca
gtggcatttgcaggattcaacctggtgtattgggtcgtttatctttcaaaagacactatg
gaagtga
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