Apaloderma vittatum (bar-tailed trogon): 104272397
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Entry
104272397 CDS
T08559
Symbol
ATM
Name
(RefSeq) LOW QUALITY PROTEIN: serine-protein kinase ATM
KO
K04728
serine-protein kinase ATM [EC:
2.7.11.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03440
Homologous recombination
avit04068
FoxO signaling pathway
avit04110
Cell cycle
avit04115
p53 signaling pathway
avit04210
Apoptosis
avit04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104272397 (ATM)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104272397 (ATM)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104272397 (ATM)
04210 Apoptosis
104272397 (ATM)
04115 p53 signaling pathway
104272397 (ATM)
04218 Cellular senescence
104272397 (ATM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
avit01001
]
104272397 (ATM)
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avit03032
]
104272397 (ATM)
03036 Chromosome and associated proteins [BR:
avit03036
]
104272397 (ATM)
03400 DNA repair and recombination proteins [BR:
avit03400
]
104272397 (ATM)
Enzymes [BR:
avit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104272397 (ATM)
Protein kinases [BR:
avit01001
]
Serine/threonine kinases: Other
PIKK family [OT]
104272397 (ATM)
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104272397 (ATM)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
104272397 (ATM)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
Check point factors
Other check point factors
104272397 (ATM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PI3_PI4_kinase
FAT
TAN
FATC
M-HEAT_ATR
HEAT_ATR
HEAT
TTI1
Motif
Other DBs
NCBI-GeneID:
104272397
NCBI-ProteinID:
XP_009865679
LinkDB
All DBs
Position
Unknown
AA seq
3061 aa
AA seq
DB search
MSLALHDLLSCCRRLKNERAVERRREIENFKRLLHDPETVFQLDRNSDSKQGKQLNWDAV
FSVLQGCFQEEMKNLQLTKPNASASTQTTRQKRMQEVASLVKYFIRCANKRGPRLKCQEL
LIYVMEIIRDPTSCAAYGSDCSSILLKDILSVRKYWCEISQQQWSELLILYGQLYLQPSG
KINRVLLARIIHTLTRGYCFQTDGLSSSDMFIFFSKALQCARQENTTAGLDHIVGAINIF
CHKFAVNCRIRICKVGEEILPTVLYIWTHYRPKDSLKQSIIELFRLQVHIHHPKGAKAQE
KGAYDSTKWQSILHNLYDLLVNEINLISSRGKYSSGSRNIAVKENLIELMADICHQIFTE
DTKVLEITQSYAVSQRESRDETAPSKRRRIELGWAVIRDNLQRSQKDFDVIPWLQIAAQL
ISKYPMSLPNSELPPLLNVFHQLLPQQRRGERTPYVLKCLTEVALCQNQKTDLKSTHKLE
LQRTWAKIWSLTIRSVSFQQIEVESFGLLGAMIQGNLVVTDKELWKIFSGPACKPSSSAL
CCLSLVMSAYSVPENLNIEMEQSNGERNLDSVLKKAIMKWVLSCCLEEEMEECTELPPVL
CSDFPHLMVQKILVCLTMKNCRAAMTFFQNDAKCVQHLQGKEDSFSDVEELYLQTTFDEM
DIFTNFAVNIADKNVTASRFVINQNLRETLEYCLLAMSEKLLSSYTPKVVAAEHLVRCVS
LLVGVLGCYCYTGVVKEEDACKSELFQKAKSLIHYVGESISQSKNKLNEDAHISSLRTLI
TQCTKCVCSCSKNSGNKMLSNIFLRLLTSKFMNDLIDICRNLMTFTGKSSEPGEVDLMGK
DPEESVMEVDNQVSDDLFGDRSVTDISDTNESGEMQNVTGALSPLAEEQLTKQDLLLLEI
LRFLCICVTTVQIQTASFRASDIRSQLLMLTDGSIFDSAKPLHLHVYLVLLKELPVEEHL
LPEGDVVTLLRPLSGVCALYRRDQEVCKVILNNLLPVAVELAHAEEKGDARGHFLTVIRA
FWHLAKGGKCTAPVRVALLSCMKALLEADPYCKWAILNMENENLPVSDAFPHFLADNHHQ
VRILAAKSIASLFQDVKQRDTSGMAKPLPLELQQKAFENAYLRVQEGMRELVRGDASPED
LLDKQCNGKAVLLMLITTILCCSPVCEKQALFAICQSVKENGLEPHLVKKVLKKVSDVFG
YKSVEDFMASHLDYLVMEWLKINDSGYCLSAFPYVLLNYTSLEEFYRSCYKVLTPHLVIR
SQFEDVKSLANTIEKDWRQVLADSFPRILVNILPYFAYQSHGKSEVAEQRDTALKVYDML
KDENCLGKQQIDNLSHNNLPEIVVELLMTLHELPDATVEGGACLRKYIRELDPAPNPPHF
PSYVIKATLDYISNCHKSKVKSLVAVLSKSPDLFQKILLALCRHASDTNNVYKKHRVLII
YHLFVSLLLKEIKDGLGGAWAFVLRDVIYTLIHHINSRPVVIREISMRSFSLCCDLLHHV
CHTAVTCCNDALESHLHVIVGTLTPLAVDQPEIQEQVLGLLKYLVIDNKDNENLYQAIKC
LDPFPEHPAFKDLRATQQKIKYSRGPYSLLEEINHFLSVGVCDSLPLTRLEGLHYLRKQL
EQYKDQMKDLLKNFQEKPEDSVMVKLVVSLLQLSQMAVNRTGEKAMLEAVGSCLGEIGPM
DFSTIALQRAENALDSKAVDLLEDRKLQWVFIMLTQINIALTDNCIDVRAAAVSCLKNIL
ATKSGSEFWEVYKDKADSMLIYLQPFRVSRKKFFVVPSNDTEGPLETLDDTNLWIPLGES
HETWIKHLTSSILDSGGVQNEVLQLMKPLCEVKTDLCQTLLPYLIHDILLHDSDESRRNL
LSVHIQKFFTACCKFASSSRSATPPNSDSEQEIHNFRSLDKVSRRAMLAVVDYLRRQKRS
VSGTVFDDSFWLDLNYLEVAIAAQSCAAHFTALLYAEIYADKINRDKQQERSLTFEEESQ
RTTISILNEKSKEETGISLQDLLMDIYRSIGEPDSLYGCGGGRVLQPLARIRTYEHEAVW
EKALVTYDLEASLSPSTRQAGIIEALQNFGLCHTLXXXXXXXXXXLKGLEQENTEWCAEL
QEIRYQAAWRNMQWGHISSAKDETGRPGYHESLYDALQSLRDKEFSAFYDSLKHARVNEV
EELCKGSLESVYSLYPTLCRLQLIGELENIGLLFSRSVTTQQLNGVYLKWQRQSQLLKDS
DFCFQEPVMALRTVILEILLEKENENTKRECIKDILTKHLVELSRLARTAKNTQLPEKAM
FQIKQYNPTGHGVSEWELEEAQIFWAKKEEGLALNILKGMIKKLDADWFQNDPHLKLMYT
ECLRLCGTWLAETCLENPTVIMQKYLEKAVEIAASHNGDSSDELKKGKMKAFLSLARFSD
NQYQRIENYMKSSEFENKQALLRKAKEEVGLLRERNVQTNRYTVKVQRELELDECAMRAL
TEDRKRFLCKAVENYINCFLSGEEHDMWIFRLCSLWLENSGVDRVNEMMKKNAEKIPSYK
FLPLMYQLAARMGTKRMSGLGFHEVLNNLMSRISLDHPHHTLFIILALANANKDELLTKP
DAIRRNKLIKNAPKEISQLDVDRMEAARNIIDIIRKRKARMVRDLEALCDAYIILANVDA
TPWKTQRKGISIPADQPIIKLKNLEDVVVPTTEIKVDPTGQYENLVTIRSFKPEFRLAGG
VNLPKIIDCVGSDGKERRQLVKGRDDLRQDAVMQQVFHMCNMLLQQNTETRKRKLTIRRY
KVVPLSQRSGVLEWCSGTSPIGEFLVNVDEGAHKRYRPKDYSSYQCQKMMMDAQRKHFEE
KYNIFMKVCENFQPVFRYFCMEKFLDPAVWFEKRLAYTRSVATSSIVGYILGLGDRHVQN
ILIDEQTAELVHIDLGVAFEQGKILPTPETVPFRLTRDIVDGMGISGVEGVFRRCCEKTM
AVMRNSQEALLTIVEVLLYDPLFDWTMNPLKALYLQQRPEDEADMNSTLSSDPQECKRKA
SSDDQSFNKVAERVLMRLQEKLKGVEEGTVLSVGGQVNLLIQQAMDPKNLSRLFPGWKPW
V
NT seq
9186 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgcgttacatgatctgctcagttgttgtcgtcgccttaaaaatgagagagct
gtggagcgaaggagggaaattgaaaatttcaagcgacttctccatgatcctgaaacagtt
ttccagctggaccgaaattctgattctaaacaaggaaaacaactcaattgggatgctgta
ttcagcgtcttgcagggatgtttccaggaagaaatgaagaacctgcaactgacaaaacca
aatgcatctgcttcaactcaaactaccagacagaaaaggatgcaagaagtcgcaagcttg
gtcaaatatttcatcagatgtgctaataaaagaggacccagactgaaatgtcaggaactt
ctgatttatgtcatggaaatcataagagatccaacaagttgtgctgcttatggatctgac
tgtagtagtatactcctgaaagatatcctctcagtaaggaaatactggtgtgagatatcc
cagcagcagtggtcagagttgctgatcctgtatggccaattatacctccaaccttctggg
aagattaatagagtcttgttggctaggataattcacacgcttacgagggggtactgcttc
caaactgatggattgagttcttctgatatgtttattttcttttcaaaagcattgcagtgt
gcaaggcaggagaatactactgcaggcctggatcatattgttggagcaattaatatcttc
tgccataaatttgctgtgaactgtcgcatacggatttgtaaagtaggggaagaaattttg
cccacagtgctttatatatggactcattatagaccaaaagattccctgaagcaatcaata
attgagttgtttcgtctccaagttcatattcatcatccaaagggtgcaaaagctcaagaa
aaaggtgcatatgactcaacaaaatggcaaagtattttacacaacctgtatgatctgctg
gtgaatgaaataaatctcatcagtagtagaggaaagtattcttcaggctcacgtaatatc
gctgtaaaggaaaatttgattgagttaatggctgatatttgtcatcagatttttacagag
gataccaaagttttggaaattactcagtcgtatgctgtttcacaacgagagtccagggat
gaaacagcaccgagcaagcgcaggaggatcgagctgggctgggcggtaattcgagacaat
ctgcaaagatcccagaaggattttgatgtcataccttggttacagattgcagctcagtta
atatcaaaatatcccatgagtcttcctaacagtgagctgcctcccttactcaatgtattt
caccagttactgcctcagcagcgccgaggagaaaggaccccatatgtgctgaagtgtctt
acagaggtagctttgtgtcaaaaccagaaaactgatttgaaaagcacccacaaattggag
cttcagagaacctgggcaaagatttggtctcttaccatacgtagtgtaagtttccagcag
attgaagtggagagctttgggctacttggagctatgattcaaggaaaccttgttgtaaca
gataaagaactctggaagatattttcaggaccggcgtgcaagccttcaagttctgctcta
tgttgtttatcattagtgatgtctgcctattcggtgccagaaaatttgaacatagagatg
gaacagagtaatggtgaaagaaatctggattctgtattaaagaaggcgataatgaaatgg
gtgctgtcctgctgtttggaggaagaaatggaagaatgcacagagttgcctcctgtgctc
tgcagtgattttcctcatcttatggtgcaaaaaattcttgtgtgccttacaatgaagaac
tgcagagctgccatgacttttttccagaatgatgctaagtgtgtgcaacacttgcaaggg
aaagaagacagtttttctgatgttgaagagctgtatctgcagacaacatttgatgaaatg
gatattttcactaactttgcagtaaatattgcagataaaaacgtgactgcttcaagattt
gtcatcaaccaaaatcttagggaaacactggagtactgtcttttagcaatgtcagaaaaa
cttttaagcagctatactcctaaggttgttgctgcagagcaccttgtccgatgtgtcagt
ctcttggttggtgttcttggttgctattgctacactggtgtagttaaagaagaggatgcc
tgtaaatcggagttgttccagaaagctaagtctctcattcattatgtcggagaaagcatt
tctcagtctaaaaacaaactaaatgaagatgcccacatcagctcactgaggactctgata
acgcagtgtacaaaatgtgtatgcagttgtagcaagaacagtggtaacaagatgctgtct
aacatattcctgcgtttgttgacgtcgaaatttatgaatgatctcatagatatttgtaga
aatctgatgacatttactggaaaatcaagtgaaccgggagaagtggatctgatggggaag
gatcctgaggagagtgtaatggaggtagataaccaggtatctgatgatttatttggtgat
cgttcagtgactgacatcagtgatacaaatgagtctggtgagatgcaaaatgtaacaggt
gctttgagcccattagctgaagaacagttgacaaagcaggatttacttctccttgaaatt
ctgaggtttttatgtatctgcgtaactacggtccaaattcagacagcgagcttccgagcc
tctgatatacggagtcagctgttaatgcttactgatggcagcatctttgatagtgctaaa
ccactgcatctgcacgtgtacttggtccttttgaaggagctccctgttgaagaacacctc
ttgcctgaaggcgatgttgttacacttcttaggcctctttctggtgtgtgtgctttgtac
cgtcgagatcaagaagtttgtaaagtaattctaaataatttacttcctgtagcagtagaa
ttggcccatgctgaagagaaaggggatgcccgaggacactttttgacagtcattagagcc
ttttggcatttagctaaaggagggaaatgcacggccccagtgagagtggcccttttaagc
tgcatgaaagccctacttgaggctgatccttattgcaagtgggcaatccttaatatggag
aacgaaaatctacctgtgagtgatgctttcccacattttctcgcagataatcaccatcaa
gtacgcattcttgctgcaaagtcgattgccagtttatttcaagatgtgaaacagagagat
acttctggaatggcaaagcctcttcccttggaactccagcaaaaagctttcgagaatgcc
tatctgagagttcaggaaggaatgagagagctggtcaggggtgatgcaagtcctgaagat
cttttggacaaacagtgtaatggaaaagctgttttgctgatgcttataaccacgattctg
tgctgcagtccggtctgtgaaaagcaagctttgtttgctatttgccaatccgtgaaagag
aatggattagaacctcaccttgtgaaaaaggttttgaaaaaagtatctgacgttttcggc
tataaaagtgtagaagacttcatggcatcacatttagactatttggtgatggagtggctg
aaaatcaacgacagtggatattgcctgtctgcttttccgtatgttctattgaactatact
agccttgaagaattctataggtcttgttataaagttttgactccacacctggtgattaga
agtcaattcgaagatgtgaaatcacttgccaacacaattgaaaaagactggaggcaggtt
ctagcagactcttttccaagaatacttgtgaatattctcccctattttgcctatcaaagc
catggcaagagtgaagtagcagagcaaagagatacagctttgaaagtctacgacatgctc
aaggatgaaaactgcttaggaaaacagcaaattgacaatttgtctcataataacttacca
gaaattgtggttgaactgttgatgaccttacacgaactgcctgatgccacagttgaagga
ggagcttgtctacgtaaatatataagggaactggatcctgctcctaatccacctcatttt
ccatcttacgtgattaaggctaccttggactacattagcaactgtcataaaagcaaagta
aaaagtcttgtggcagttctttctaaaagccctgatttatttcagaaaatccttctagcc
ctttgtaggcacgcatcagatacaaacaacgtttacaagaaacacagagttcttataatt
tatcacttgtttgttagtctgctactgaaagagataaaagatggtttaggaggagcatgg
gcttttgtcctgcgagacgtaatttacaccctgattcaccacatcaatagcagacctgtt
gttatcagagaaatatccatgcgcagcttttccctctgttgtgatctccttcatcatgtt
tgccacaccgcggtgacgtgttgcaatgacgctctggagagccaccttcatgttattgtg
ggaaccctcacacctcttgctgtggaccagcctgagattcaggaacaggttctaggtttg
ttgaaatatcttgtgatagataacaaggataatgaaaatctctaccaagcaatcaaatgc
ttagatccttttcctgaacatcctgcttttaaagatttgcgagcaactcagcagaaaata
aaatacagtagaggaccatattctcttctggaggaaattaatcacttcctctcagttggt
gtttgtgattcactgcccttaacacgactcgaaggactgcattatttacgcaaacaattg
gaacaatataaagatcagatgaaggatctactgaaaaatttccaggaaaagccagaagat
tctgtcatggtgaaattggtggtgagcttgctgcagctgtcccagatggccgttaaccga
accggtgaaaaagcgatgctggaggctgttggaagttgcttgggagaaattggtcccatg
gatttctccaccatagctcttcagcgtgctgaaaatgcactggattctaaagcagtggac
ttacttgaagatagaaaacttcagtgggtcttcataatgttaactcaaataaatattgct
ttaacagataattgtattgatgtcagagctgctgctgtttcctgtttgaaaaacatatta
gccaccaagtcaggcagtgaattttgggaagtttataaagataaagctgattccatgtta
atctatctacagcctttcagagtatctaggaaaaagttttttgtagtaccttctaatgat
acggagggtcctttagaaactttggatgacacaaacctgtggattcctctgggagaaagt
catgagacctggatcaagcacctgactagttcaatactggacagtggaggggtgcaaaat
gaagttctccagttaatgaagccactgtgtgaggtgaaaacagacttgtgtcaaacttta
cttccgtacctgattcatgatatcctccttcatgactcagatgaatctcggagaaatctt
ttgtctgttcatatccagaagttttttacagcctgttgcaaatttgcctcatctagtaga
tctgctacacctccaaattctgattcagagcaagaaatccataattttagaagtttggat
aaagtgtctcgacgagccatgcttgctgttgttgattacttaagaagacaaaagagatct
gtttcaggtacagtttttgatgacagcttctggctcgatctgaattatcttgaggttgct
atagcagcccagtcttgtgctgctcacttcacggccttgctctatgcagaaatctacgca
gacaagataaatagagacaaacagcaagaaagaagtttgacatttgaggaagaaagtcaa
agaacaactattagtattttaaatgaaaaaagtaaagaagaaactggcataagtttacag
gaccttctcatggacatatatagaagtattggagaacctgacagtctctatggctgcggc
ggaggaagagtgttacagccattagcacggataagaacatatgaacatgaagcagtgtgg
gagaaagcccttgtaacttacgaccttgaggcaagcctctctccatctactcgccaggct
ggaataatagaggctttgcagaattttgggctttgccacactcttnnnnnnnnnnnnnnn
nnnnnnnnnnnnnntttgaaaggactggaacaggagaacacggagtggtgtgcggaactg
caggaaattcgctatcaggcagcatggaggaacatgcagtggggccacatctcttctgcc
aaagatgagacaggaagacccgggtatcatgaatcactgtatgatgctcttcagtcttta
cgagataaggaattctctgctttctatgacagtcttaagcatgccagagtgaatgaagta
gaagagctatgcaaaggcagtttggagtctgtttattcattatatcccactctttgcaga
ctacagctaattggagagttggaaaatataggtctgctgttctccagatctgttactact
caacaactgaatggtgtttatttgaagtggcagagacagtcccagcttctcaaggacagt
gacttctgtttccaggaacctgtcatggctttgcgcactgtaattttagagatcttgctt
gaaaaggaaaatgaaaataccaagagagagtgtattaaagacatcctgaccaagcatcta
gtagagctctctagattggcaagaactgctaaaaatacacagcttccagaaaaagctatg
tttcagatcaaacaatacaatccaacaggacatggagtgtctgaatgggagctagaagaa
gctcagattttctgggcaaaaaaggaagagggccttgcgctgaatattcttaaagggatg
ataaaaaagttagatgcagattggtttcagaatgatcctcatctgaaattgatgtatacc
gagtgtctcaggctatgtggaacctggttagcagaaacatgcttggaaaaccctacagtc
atcatgcagaaatacttagaaaaggctgtggaaattgctgcgagccacaatggagacagc
agtgatgagctcaagaaaggaaagatgaaggctttcctgtccttggctcgtttctcagat
aatcagtaccagcggattgagaattacatgaaatcctcagagtttgaaaataagcaggcg
ttactgaggaaggccaaggaggaggtcggcctcctcagggagcgtaacgttcagacaaat
agatacacggtgaaggttcagcgagaacttgaactggatgaatgtgccatgcgtgcctta
actgaggatcgtaaacgtttcttatgtaaagccgtggagaactatatcaactgtttccta
agtggagaagaacatgatatgtggatcttccgactctgttccctatggcttgaaaattct
ggagttgacagagtcaatgaaatgatgaagaaaaatgcagagaagatcccttcatacaag
tttttgcctctgatgtaccaactggcggctcggatgggaaccaagaggatgagtggttta
ggatttcatgaagttctgaataatctaatgtctagaatttcactggatcaccctcatcat
actttgtttataatactagctttggcaaatgctaacaaagacgaactcctcacaaagcca
gatgcaataagaagaaataagttaattaaaaatgcaccgaaagaaatctcccagcttgat
gtggacagaatggaggctgctagaaatataattgatatcataagaaaaaggaaagctcgt
atggttagagatcttgaagcactttgtgatgcttacatcatattagcaaatgtagatgct
actccatggaaaactcaaagaaaaggaataagtattccagccgaccagccgattattaaa
ctgaagaacttggaggacgttgttgttcctaccacggaaattaaggtggatcccacaggt
caatatgaaaatttggtgacaataaggtcttttaagccagaatttcgcttagcaggaggt
gtgaatctgccaaaaataatagattgtgtaggatcagatggtaaagaaaggagacaactg
gttaaggggcgtgatgacctgagacaagatgctgttatgcaacaggtgttccatatgtgc
aatatgttgctccagcaaaacactgaaacacgaaagagaaaactaactatccgaagatac
aaggtggttcccctttctcagagaagtggtgtccttgagtggtgctcgggaacaagtccc
atcggggagtttctggtgaatgttgacgagggagctcacaagagatacagaccgaaagat
tattcctcttatcagtgtcagaaaatgatgatggatgcacaaaggaaacattttgaagag
aaatacaacatcttcatgaaagtctgtgagaattttcaacctgtgtttcgttatttctgc
atggaaaaattcctggatccagctgtgtggtttgaaaaacgattggcatacactcgcagc
gtggctacatcttctatagttggctacattcttggacttggagatagacacgttcagaat
atcttgattgatgaacaaacggcagaactggtgcatatagatctgggggttgcttttgag
caaggtaaaatccttcccacaccagagactgttccatttagattaaccagggacattgtg
gacggaatgggcattagtggcgtggaaggagtcttcaggagatgctgtgagaagacaatg
gctgttatgagaaattctcaagaagctttgctgactattgtagaggtgctgctctatgat
cctctttttgactggaccatgaaccccttgaaagctctgtatttgcaacagagaccagag
gatgaggctgacatgaactctacactcagttctgatccgcaagaatgtaaaagaaaagcc
agcagcgatgaccagagttttaacaaagtggctgagcgtgttctgatgagacttcaggag
aagctgaaaggtgttgaggagggaacggtgctcagcgtgggcgggcaggtgaacctcctc
atacagcaagccatggacccaaaaaatctgagccggctcttccctggatggaaaccctgg
gtgtga
DBGET
integrated database retrieval system
