KEGG   Apaloderma vittatum (bar-tailed trogon): 104272418
Entry
104272418         CDS       T08559                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03030  DNA replication
avit03410  Base excision repair
avit03420  Nucleotide excision repair
avit03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    104272418 (RFC5)
   03410 Base excision repair
    104272418 (RFC5)
   03420 Nucleotide excision repair
    104272418 (RFC5)
   03430 Mismatch repair
    104272418 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:avit03032]
    104272418 (RFC5)
   03036 Chromosome and associated proteins [BR:avit03036]
    104272418 (RFC5)
   03400 DNA repair and recombination proteins [BR:avit03400]
    104272418 (RFC5)
DNA replication proteins [BR:avit03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    104272418 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    104272418 (RFC5)
Chromosome and associated proteins [BR:avit03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    104272418 (RFC5)
DNA repair and recombination proteins [BR:avit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     104272418 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    104272418 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C RCF1-5-like_lid AAA_assoc_2 DNAX_ATPase_lid Gp44_lid
Other DBs
NCBI-GeneID: 104272418
NCBI-ProteinID: XP_009865707
LinkDB
Position
Unknown
AA seq 172 aa
CPRFRFGPLPPELMVPRLRHVVQEEGVDVTEDGMKALVTLSSGDMRRALNILQVRVGGCG
RSPQRRAAPCTGHPLKSDIANILDWMLNQDFSTAYRNITELKTLKGLALQDILTEIHLFV
HRVDFPPSIRIQLLIKMADIEYRLAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq 519 nt   +upstreamnt  +downstreamnt
tgcccgcgcttccgcttcggccccctccccccggagctgatggtgccgcggctgcggcac
gtcgtgcaggaggagggggtggacgtgacagaggatgggatgaaggctctggtgaccctc
tcgagtggtgacatgcgcagagccctcaatatcttgcaggtacgggtcgggggttgtggt
cgctctcctcagcggcgggcagccccttgcacggggcaccccctcaagtctgacattgcc
aacatcctcgactggatgctgaaccaggacttttccaccgcctaccgcaacatcaccgag
ctgaagacgctgaagggcttggccctgcaggacatcctcaccgagatccacctcttcgtg
cacagagtcgatttcccaccctcaatccgcatccagctgctgatcaaaatggcagacatc
gagtaccgactggctgctgggaccagtgaaaagatccagctgagctccctcatcgcagct
ttccaagtcaccagggacctcatcgtggctgaagcctga

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