Apaloderma vittatum (bar-tailed trogon): 104272418
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Entry
104272418 CDS
T08559
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03030
DNA replication
avit03410
Base excision repair
avit03420
Nucleotide excision repair
avit03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104272418 (RFC5)
03410 Base excision repair
104272418 (RFC5)
03420 Nucleotide excision repair
104272418 (RFC5)
03430 Mismatch repair
104272418 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avit03032
]
104272418 (RFC5)
03036 Chromosome and associated proteins [BR:
avit03036
]
104272418 (RFC5)
03400 DNA repair and recombination proteins [BR:
avit03400
]
104272418 (RFC5)
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104272418 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
104272418 (RFC5)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
104272418 (RFC5)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104272418 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
104272418 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
RCF1-5-like_lid
AAA_assoc_2
DNAX_ATPase_lid
Gp44_lid
Motif
Other DBs
NCBI-GeneID:
104272418
NCBI-ProteinID:
XP_009865707
LinkDB
All DBs
Position
Unknown
AA seq
172 aa
AA seq
DB search
CPRFRFGPLPPELMVPRLRHVVQEEGVDVTEDGMKALVTLSSGDMRRALNILQVRVGGCG
RSPQRRAAPCTGHPLKSDIANILDWMLNQDFSTAYRNITELKTLKGLALQDILTEIHLFV
HRVDFPPSIRIQLLIKMADIEYRLAAGTSEKIQLSSLIAAFQVTRDLIVAEA
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
tgcccgcgcttccgcttcggccccctccccccggagctgatggtgccgcggctgcggcac
gtcgtgcaggaggagggggtggacgtgacagaggatgggatgaaggctctggtgaccctc
tcgagtggtgacatgcgcagagccctcaatatcttgcaggtacgggtcgggggttgtggt
cgctctcctcagcggcgggcagccccttgcacggggcaccccctcaagtctgacattgcc
aacatcctcgactggatgctgaaccaggacttttccaccgcctaccgcaacatcaccgag
ctgaagacgctgaagggcttggccctgcaggacatcctcaccgagatccacctcttcgtg
cacagagtcgatttcccaccctcaatccgcatccagctgctgatcaaaatggcagacatc
gagtaccgactggctgctgggaccagtgaaaagatccagctgagctccctcatcgcagct
ttccaagtcaccagggacctcatcgtggctgaagcctga
DBGET
integrated database retrieval system