Apaloderma vittatum (bar-tailed trogon): 104272743
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Entry
104272743 CDS
T08559
Symbol
TLR4
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04145
Phagosome
avit04217
Necroptosis
avit04620
Toll-like receptor signaling pathway
avit04621
NOD-like receptor signaling pathway
avit05132
Salmonella infection
avit05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104272743 (TLR4)
09143 Cell growth and death
04217 Necroptosis
104272743 (TLR4)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
104272743 (TLR4)
04621 NOD-like receptor signaling pathway
104272743 (TLR4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104272743 (TLR4)
09171 Infectious disease: bacterial
05132 Salmonella infection
104272743 (TLR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104272743 (TLR4)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
avit04054
]
104272743 (TLR4)
04090 CD molecules [BR:
avit04090
]
104272743 (TLR4)
00536 Glycosaminoglycan binding proteins [BR:
avit00536
]
104272743 (TLR4)
Membrane trafficking [BR:
avit04131
]
Endocytosis
Phagocytosis
Toll-like receptors
104272743 (TLR4)
Pattern recognition receptors [BR:
avit04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
104272743 (TLR4)
CD molecules [BR:
avit04090
]
Proteins
104272743 (TLR4)
Glycosaminoglycan binding proteins [BR:
avit00536
]
Hyaluronan
Cell surface receptors
104272743 (TLR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_1
LRR_EndoS
LRR_9
LRR_Zer-1
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
104272743
NCBI-ProteinID:
XP_009866120
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MPSRRALSPGTLVVLLQLALVPSQLAGCLLDLCLEVIPNKTFRCTGLNISGVPGEXXXXX
XXXXXXNTTQNLDLSFSNVKSLGSNYFASVPELQLLDLTRCHLHTIEDNSFKDLHNLSTL
ILTANSLQYLGTAAFHGLTSLKKLVLVETSIASLTELPIGHLHSLQELNLGHNNIASLKL
PTYFTNLTSLRHLSFFANKITHISKGDLDALTEVSRLNLTLVLSLNNIKYIQPGSFAKIH
LGELVLRSSFENFNVMHTSLQGLTGLRVNKLIVGEFNDNQRLRDFQDGLLGGLCQVQMQE
FVLICFRQFENNTDTLFNCIANVSSIRLVDLQLEEVSEVPMFSQVKQLECKKCKFKDVPA
VKLSLFKELRVLRITKSKYLNTFEQKFESLSKLEVVDLSENRLTFASCCSRQFRKCPNLK
HLNLSFNSDISVTGDFSSVKDLLYLDFQHTKLVGPGSYPVFLSLQKLIYLDISHTRTHVK
SQCTFCGLNSLRVLKMAGNSFENNKLDNNFKNLSHLHTLDISSCKLIQVDQSTFDALSEL
KELNISNNKLLIFDPVVYKPLQALTALDFSNNQLSALLDSALEILPDSLVLLDISQNLFE
CSCVNLNFLKWVKEKQGLLQNRELMTCHMPALMKNMSLSRFDLSSCHVNVSTVSSSVIML
LAAAVFLFLIYKYYFQLYYSILLLGGCKHSAERGDTYDAFVIHSSKDQEWVIKELVEPLE
SGTPPFQLCLYYRDFLPGVPIVTNIIQEGFLSSRNVIAVISADFLESKWCSFEFDIAQSW
QLVEGKAGIIMIVLEEVDKALLRQRLGLSRYLKRNTYLEWKNKEISRHIFWRQLTGVLLE
GKKRNHEEVKLM
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcagaagagctctttccccagggacactcgtggtgctgctgcagctggcactt
gtcccatcacagctggcaggctgcctcctcgatctctgcttggaggtcatccctaacaaa
actttcagatgcacaggactgaacatctctggagttcctggtgaaannnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnaaataccacccagaacttggatctcagtttcagcaatgtgaaa
tcactgggatctaattatttcgcatcagttcctgaactgcagcttctggatcttacaagg
tgccacctccacacaatagaagataactcctttaaggatcttcataacctttccacctta
attttaactgccaattccctccagtacctggggacagcggccttccatggcttaacatct
ctgaaaaaactggtactggtggaaaccagcatagcctctctgactgagctacccattgga
cacttgcatagcctacaggagctgaatttgggccacaacaacattgcttcgttgaagctt
cccacatatttcaccaacctgacctctctcaggcacctgagctttttcgctaacaagatc
acacatatctccaaaggagaccttgatgccctgacggaagtgagcaggctcaacctcaca
ctggtgctttccttgaataatataaagtacatacagccggggtcctttgcaaagattcac
ctcggtgagcttgttctaaggtcctcttttgagaacttcaatgtgatgcacacctctctt
caaggcctgactggtttacgggtcaacaaattaatagttggagaattcaacgacaatcag
agactgagagactttcaggacggactcttgggtggcctgtgtcaggtacaaatgcaagag
tttgtcttaatctgcttcaggcaatttgagaataacacagatactctttttaactgcata
gccaatgtctcaagtattcggttggtggacctccaacttgaagaggtatcagaggttcct
atgttctctcaagtgaaacagctggaatgcaagaaatgcaagtttaaggacgtgcctgct
gtgaagctgtctctgttcaaggagctgagagtgcttcgtattaccaagagcaagtacctc
aatacctttgaacagaaatttgagagtctaagtaaactggaggtcgtagatttgagtgag
aatcgcctcaccttcgctagctgctgttcccgtcagtttcgcaagtgtccgaatttgaag
cacttgaacctaagcttcaattctgatatcagcgtgactggagatttcagtagcgtgaag
gatttgttatatttggactttcagcacacaaagttagtaggtcctggctcctaccctgtc
tttctatcccttcagaaactcatttaccttgatatttcccacaccagaactcatgttaaa
tcccagtgtacgttttgtggtttgaattctttgcgagtgctcaagatggcaggcaactcc
tttgagaacaacaaattggacaacaacttcaaaaacctaagtcacctccacaccttggat
atttcaagttgcaaattaatacaggtggatcaaagtacatttgatgccctctctgaacta
aaagagctaaacatcagcaacaataagctactgatatttgatcctgtagtctacaagcct
ctccaagccctcacagccctggatttcagcaacaaccagctgagcgctctgttggactca
gccctggaaatcctgcctgatagtctggtcctgttagatatctctcaaaacctgtttgaa
tgctcttgcgtaaacttgaactttctgaaatgggtcaaggaaaaacaggggctactgcag
aacagggagctgatgacatgccacatgcctgcactcatgaagaacatgagcctgtcacgc
tttgatctgtcctcctgccatgtcaatgtgagcacagtgtcatcctcagtgatcatgttg
ctcgctgcagcagtgttcctcttcctgatttataagtactacttccagctatactactca
attttgctgcttggtgggtgtaaacactctgcagagaggggtgacacctatgacgcattt
gttatccactccagcaaagaccaagaatgggtgataaaagaactggtggaacccttagaa
agcggaacgcctccctttcagctttgtctttactacagggatttcctaccaggggtaccc
attgtcaccaatattatccaagaaggttttctgagtagcagaaatgtcatcgcagtcatc
tctgctgactttctggaaagtaagtggtgcagctttgagtttgacattgcccagtcctgg
cagcttgttgaaggaaaggctggaatcatcatgattgtactagaagaagtggataaggcc
ttgctgaggcagaggctggggctgtcccgatacctgaagaggaacacctatctggagtgg
aaaaacaaggaaatcagccggcacattttctggaggcagctgacaggagtcctgttagaa
ggcaaaaaaaggaatcatgaggaggtgaaactcatgtga
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