Apaloderma vittatum (bar-tailed trogon): 104272788
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Entry
104272788 CDS
T08559
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104272788 (PRDM1)
Transcription factors [BR:
avit03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
104272788 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_6
zf-C2HE
zf-C2H2_15
CapR
Motif
Other DBs
NCBI-GeneID:
104272788
NCBI-ProteinID:
XP_009866185
UniProt:
A0A091NEK2
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
VTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSN
WMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVWYCRDFAERLHYPSSRELT
MMNLTQTHVNPKQHSADKDELYQKSIPKKEHSVKEILKMESNPPKGKDFFQTNISPVTPE
KDLDDLHKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYGMDRPSYITHSPIQTSTTPSP
SGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGH
LPPAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNFNLFPRMYPLYGNLLSGGSLS
HHMLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSITGAAASMKDKPCSPTSGSP
TAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYEC
NVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCH
KRSSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYI
HLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNADKLEEVEDNIDLTSIVEK
DILTMLRREMEGANLKVSLQRNLGNGLISSGCNLYESSDMSVMKLPHGHPLPLLPVKVKQ
ETVEPMDP
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtcactggagttataagcaaagaatacatcccaaaaggaacgcgctttggacccctggta
ggagagatctataccagcgatacggttcccaagaatgcgaacagaaaatacttttggcgg
atctattcaagtggtgagcttcatcacttcattgatggatttaacgaggacaagagcaac
tggatgcgttatgtaaaccccggctactctgttcaggaacagaacttggctgcttgtcag
aatggaatgaacatctacttctacaccatcaagcccatccctgccaaccaagagctgctt
gtgtggtattgtcgagactttgcagagaggctgcactatccctcctccagagagctgaca
atgatgaacctcacacaaacccatgttaatccaaagcagcacagtgctgataaagatgag
ctttatcagaagagcatcccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaa
tccaatcctccaaaaggaaaagacttcttccagaccaacatttcaccagttactccagaa
aaagacttggatgatttgcataagaactatagtccggagaggtgtttcttccctcgagtt
gtctacccaatccgacctcacattccagaagactatctgaaagcttccttagcatatggg
atggacagacccagctacatcactcactcacccatccagacgtctactacaccgagtcct
tctgggaggagcagcccagaccaaagtttaaaaagttcaagtcctcacagcagtccaggg
gtcacggtttcacctctggcacctacttcccaagagcacagagagccgtactcttacttg
aacggatcgtatggctcagaaggattagggtcttatcctggatatgcacctcctggccac
ctcccacctgcgtttctaccgtcctataacccccactaccccaaattcctgttacctcca
ttcaacatgagctgtaataacctgagtgctttgaacaatatcaatggcatcaacaatttc
aatctgttcccgaggatgtatcctctttatggcaatctgctcagtggaggtagcctttcc
caccacatgttgaaccccaccacgctccctagttcattgcccagcgaaggaggccgtcga
ttgctacagcctgatcatccaagagacttcctcataccagcacctaacagtgccttctcc
atcacgggcgctgctgccagcatgaaggacaagccatgcagccctaccagtggatcaccc
acagctggtacagcagccagttcagaacacataatgcaacctaaacctacctcagtggtg
ttggctgccaccggtggtgaagaagccatgaatctcattaaaagtaagaggaatgtgacc
ggttacaaaaccctcccgtacccactgaagaagcagaatggaaagatcaagtacgagtgc
aacgtttgctccaagacctttggccagctctccaacttgaaggtgcacctccgagtacac
agcggggagagaccgttcaaatgccagacttgcaataaaggcttcacgcagctggctcac
ctccagaagcactatctggtacacacaggagaaaaaccccacgagtgtcaggtttgtcac
aagcggtccagcagcaccagcaatctcaaaacccacctgcggctccactctggagagaag
ccttaccagtgcaagctctgcccagccaaattcacccagtttgtgcacctgaagctgcac
aagcgtctccacacccgggagcgtccccataaatgcatccattgtcacaagagctacatt
cacctctgcagcctccaggtccacctgaagggcaactgccccgtggctcctgcctccggc
ctctccatggaggacctgaatcgaatcaacgaggagatcgagaagttcgacatcagtgac
aatgccgacaagttggaagaagtggaggacaatatcgacttaacatcgatcgtggagaag
gatatactgaccatgctcaggagggaaatggaaggagctaatctgaaagtatctctgcag
aggaacctgggaaatggacttatctcctcaggatgcaacctttacgagtcgtcagatatg
tcagttatgaagttgcctcatggtcacccactacctctgttacctgtaaaggtcaagcaa
gaaacggttgaaccaatggacccttaa
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