Entry |
|
Symbol |
EXOSC8
|
Name |
(RefSeq) exosome complex component RRP43
|
KO |
K12586 | exosome complex component RRP43 |
|
Organism |
avit Apaloderma vittatum (bar-tailed trogon)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:avit00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104273076 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:avit03019]
104273076 (EXOSC8)
Messenger RNA biogenesis [BR:avit03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
104273076 (EXOSC8)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
302 aa
MIEVKASSLCRQVPCKEEAFQEVNVGKHLFLGTVEPLEYYRRFLKENCRPDGRELGEFRA
TTVNIGSITTADGSALVKLGNTTVVCGVKAELAAPAVDSADKGYIVPNVELPSLCSTRFR
AGPPGEEAQAASQFIADVIENSQIIAKEDLCIANGKLAWVLYCDIICLDYDGNILDASAF
ALLAALKNVQLPSVTINEETGLSEVNLKQKNPLIIRKYPVATSFAIFDDTLLIVDPTAEE
EELATGTVTVVTDDEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIKSIK
PK |
NT seq |
909 nt +upstreamnt +downstreamnt
atgattgaggtgaaagctagtagtttatgcaggcaggttccttgtaaagaagaagcattt
caggaagtgaatgtaggaaaacatctttttcttggaacagtggaaccgttggaatactat
agaagatttttgaaagagaactgtcgacctgatggaagggagttgggtgaattccgggca
actactgtcaacataggttcaattacaactgcagatggttctgccctggtgaagttagga
aatactacagtcgtttgtggagttaaagcggaacttgctgcacctgcagtagattctgct
gataaaggatatattgttccaaatgtagaactgccatccctctgctcaacgaggtttcgt
gctggaccacctggtgaagaggctcaagcagcaagccagttcattgcagatgtgattgaa
aattcacagatcatagcgaaagaagatctgtgtattgcaaacggcaagcttgcttgggtg
ttatactgtgatatcatatgtctggactatgatgggaacattttggatgccagtgccttt
gctttgttagcagcattaaaaaatgtacaattgccatcagttactataaatgaagaaact
ggtttatcagaagttaatttaaaacagaagaaccctttgattatcaggaagtatccagtt
gccacatcatttgctatatttgacgacacgttactcattgttgatccaactgctgaagaa
gaggagttggcgactggaacagtaactgttgtgactgatgatgaaggcaggctgtgctct
gtacacaaaccaggtggaagtcctctgacaggagccaagcttcaggactgtatcaccaga
gcaataacaagacacaaagaagtaaagaagctgatagacaaagtaataaaaagtataaag
cccaagtga |