KEGG   Apaloderma vittatum (bar-tailed trogon): 104273076
Entry
104273076         CDS       T08559                                 
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104273076 (EXOSC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:avit03019]
    104273076 (EXOSC8)
Messenger RNA biogenesis [BR:avit03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     104273076 (EXOSC8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PylC-like_N
Other DBs
NCBI-GeneID: 104273076
NCBI-ProteinID: XP_009866582
LinkDB
Position
Unknown
AA seq 302 aa
MIEVKASSLCRQVPCKEEAFQEVNVGKHLFLGTVEPLEYYRRFLKENCRPDGRELGEFRA
TTVNIGSITTADGSALVKLGNTTVVCGVKAELAAPAVDSADKGYIVPNVELPSLCSTRFR
AGPPGEEAQAASQFIADVIENSQIIAKEDLCIANGKLAWVLYCDIICLDYDGNILDASAF
ALLAALKNVQLPSVTINEETGLSEVNLKQKNPLIIRKYPVATSFAIFDDTLLIVDPTAEE
EELATGTVTVVTDDEGRLCSVHKPGGSPLTGAKLQDCITRAITRHKEVKKLIDKVIKSIK
PK
NT seq 909 nt   +upstreamnt  +downstreamnt
atgattgaggtgaaagctagtagtttatgcaggcaggttccttgtaaagaagaagcattt
caggaagtgaatgtaggaaaacatctttttcttggaacagtggaaccgttggaatactat
agaagatttttgaaagagaactgtcgacctgatggaagggagttgggtgaattccgggca
actactgtcaacataggttcaattacaactgcagatggttctgccctggtgaagttagga
aatactacagtcgtttgtggagttaaagcggaacttgctgcacctgcagtagattctgct
gataaaggatatattgttccaaatgtagaactgccatccctctgctcaacgaggtttcgt
gctggaccacctggtgaagaggctcaagcagcaagccagttcattgcagatgtgattgaa
aattcacagatcatagcgaaagaagatctgtgtattgcaaacggcaagcttgcttgggtg
ttatactgtgatatcatatgtctggactatgatgggaacattttggatgccagtgccttt
gctttgttagcagcattaaaaaatgtacaattgccatcagttactataaatgaagaaact
ggtttatcagaagttaatttaaaacagaagaaccctttgattatcaggaagtatccagtt
gccacatcatttgctatatttgacgacacgttactcattgttgatccaactgctgaagaa
gaggagttggcgactggaacagtaactgttgtgactgatgatgaaggcaggctgtgctct
gtacacaaaccaggtggaagtcctctgacaggagccaagcttcaggactgtatcaccaga
gcaataacaagacacaaagaagtaaagaagctgatagacaaagtaataaaaagtataaag
cccaagtga

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