Apaloderma vittatum (bar-tailed trogon): 104273100
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Entry
104273100 CDS
T08559
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104273100 (RBM39)
Spliceosome [BR:
avit03041
]
Common components
Common spliceosomal components
General mRNP proteins
104273100 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
104273100
NCBI-ProteinID:
XP_009866615
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNISIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgataggaagaggagcagaagtaaggaacgcaaacggagccgagat
cgggaaaggaaaaagagcagaagccgggagaggaagcggagcagaagcaaagagcgcaga
cgcagccgttccagaagtagagatcgcagattcagaggccgctatagaagtccctattct
ggaccaaaattcaacatttccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgctccagaagcaagagtcccttcagaaaagacaagagccctgttagagaa
cctattgataatcttacccctgaggagagggatgctcgaacagtattctgcatgcagctg
gctgcaagaattcgaccaagagatctggaagaatttttctctacagtaggaaaggtccgt
gatgtgcgaatgatttcggatagaaattcgaggcgttcaaagggaattgcttatgtagag
tttgtggatgttagttcagtccctctggcaatcggactaactggacagagggtcttgggc
gtacccatcatagtacaagcgtcgcaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgagactctatgtggggtcattacacttcaac
atcactgaagatatgcttcgaggaatttttgagccatttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggacgctcaaaaggatacggcttcattacgttctcagac
tctgagtgtgccaaaaaggccttggaacaactcaatggatttgagttggctggtaggccc
atgaaagtcggacacgtaaccgagcgcactgatgcttccagtgctagttcatttttggac
agtgatgagttggaacggaccggaattgacttgggaacaactggtcgccttcagttgatg
gcaaggcttgcagaaggtactggcttgcagattcccccggctgcacagcaggctctgcag
atgagtggatctttggcatttggggctgtggcagatctgcaaacgagactgtctcagcag
aatgaagttctagctgcagcagcttctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggatacggaaattaaagat
gatgtgatcgaggaatgtaacaaacacggaggagttatccacatctatgtagacaaaaac
tcggctcagggcaacgtgtacgtcaaatgtccttcgatcgctgctgccatcgcggccgtg
aacgcgttgcacgggaggtggtttgccggtaaaatgattacagcagcgtatgtacctctt
ccaacgtaccacagccttttcccagattcgatgactgcaacccaactactggttcccgtt
cgacgatga
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