Apaloderma vittatum (bar-tailed trogon): 104273102
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Entry
104273102 CDS
T08559
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avit01002
]
104273102 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104273102 (USP4)
Enzymes [BR:
avit01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104273102 (USP4)
Peptidases and inhibitors [BR:
avit01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104273102 (USP4)
Ubiquitin system [BR:
avit04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104273102 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
104273102
NCBI-ProteinID:
XP_009866613
LinkDB
All DBs
Position
Unknown
AA seq
907 aa
AA seq
DB search
RYLVDSRWFKQWKKYVGFDSWDMFGAGDPGLFPGPIDNSGLFGDPETQILKEHLIDELDY
VLVPTEAWNKLVTWYGCIDGQQPIVRKVVEYGLFVKHYKVEVYLLELKLCESSDPDNVIS
CHFSKADTVATIEKEMRKLFNIPDEKESRLWNRYMSNTYEQLSKLDSTVQDAGLYQGQVV
LIEVKNEDGTWPGQQFLAKSSTATSRNFTTSSKSSASSYSSVSATSVITNGDSSNSYGLN
SSHLGRGGSGFVCNSYSCRDNASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLE
DKYEAEINQNNPLGMRGEIAEAYAELIKQIWSGRQSYVAPRMFKTQVGRFAPQFSGYQQQ
DSQELLAFLLDGLHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFH
GLFKSTLVCPKCSKVSVTFDPFCYLTLPLPLRRDRLMEVTLVYADPQRRPVQYRVVVPMM
GAISDLCESLSRLSGVSAENMVVTDVYNHRFHKIFQMDEGLNHIMPKDDIFVYEVCKPSE
DGSEYITLSVYFREKTMRQSSNTSGTVLFGQPLLISVPKHKLTVDHLYSVILEQISRYVK
LPLAEEYSSPCPDKGTCSRSNGVVEGDIEEMEHQDGGQEGKEKVAEVDPCHSEGCMQIES
ARDPQPCKKPHFTFSLVNSSGTSEINSIVEGKLLKLNAFSALAIDWDSDTRRLLYDEQEA
QAFEKHGSMAQPQKKKAVVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSL
PRILVVHLKRFSYSRYWRDKLDTVVEFPIRGLNMSEFVCDPRAGSYVYDLIAVSNHYGAM
GVGHYTAYAKNKVNDKWYYFDDSSVSVASEDQIVTKAAYVLFYQRRNNEEHTAPSPPQEE
CDGMDTN
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
aggtacctggtggacagccgttggttcaagcagtggaagaagtacgtgggcttcgacagc
tgggacatgtttggagcgggcgatcccgggctctttccggggcctatcgacaactcgggt
ctgttcggcgatccagaaactcaaattttaaaagaacacctcattgatgagctagattac
gtattggttcccactgaagcctggaataaactagtaacgtggtacggctgcatagatgga
cagcagcctattgtgagaaaagtagtggaatatggtctgtttgtgaagcactataaggtg
gaagtttatcttcttgagctgaagttgtgcgagagcagtgatcctgacaatgtaatcagc
tgccactttagcaaagcggatactgttgctaccatcgagaaagaaatgagaaaactgttt
aatatcccagatgagaaggaatccaggttatggaacagatatatgagtaacacttacgag
cagctcagcaagctggatagcacagtgcaggatgcagggctctatcagggtcaggttgtt
ttaatagaagtgaaaaatgaggatggcacatggcctggacagcagttcctggcaaaatca
agcactgcaactagcagaaactttactacctcttcaaaatcatcagcaagttcttattcc
tcagtgtctgccacttctgtcattactaacggtgatagcagtaactcctatggattgaac
agctcccacctgggcaggggaggatctggatttgtctgtaactcttacagctgcagggac
aatgcttccctgtcacaacctggactctgtggactcagtaaccttggaaatacctgcttc
atgaattctgcattacagtgtctgagcaatacccctcctctgactgactatttcctggaa
gataagtatgaagccgaaataaatcagaacaatccgctggggatgagaggagaaatcgca
gaagcctatgcagagctcattaaacagatttggtctgggagacagtcttatgtggcccca
cgtatgtttaaaacgcaggttggccgatttgctcctcagttttcaggataccagcagcaa
gattcgcaggagctcttggcttttcttctagatggtttgcatgaggatttgaacagagtg
aagaagaagccctacttggagctgaaggacgccaatggcagacctgattcggaggtggca
aaggaggcctgggagaatcataggctgaggaatgattctatcattgtggatatttttcac
ggtcttttcaaatctacccttgtttgtcccaaatgctccaaagtttctgtgacatttgat
cccttctgttatttaacccttccactgcccttgaggagagatcgactcatggaagttacg
ctggtgtatgcagacccacagcgcagacctgtgcagtaccgggttgtggtgccgatgatg
ggggccatctcagatctgtgtgaatcactgtccagactctctggtgtttctgcagaaaat
atggtggtgacagacgtatataatcatcgattccacaaaattttccaaatggatgaaggt
ttaaatcatatcatgccaaaggacgacatctttgtgtatgaagtttgcaagccaagtgag
gatggctcggagtacattactctctctgtttactttcgggaaaagacgatgagacaatcc
agcaatacttcagggaccgtgctctttggtcagcctctgttaatatctgtgccgaaacac
aagctcactgtggatcacttgtacagtgtgattttggagcagatcagccgctatgtgaaa
ctccctttggcggaagagtactcttcaccctgcccagacaaaggaacttgcagtcgctcc
aatggtgtggttgaaggtgacattgaagagatggagcatcaggatggtggacaggaaggc
aaggaaaaagtggcagaagttgatccctgccactctgagggttgtatgcagattgagtca
gcaagagacccgcagccttgcaaaaagccgcatttcacttttagtcttgtgaattcctct
gggacctctgagataaactccattgtagaaggaaaactcttaaaactgaatgctttttct
gcacttgctattgattgggattctgatactcggaggctgctttatgatgaacaggaggca
caggcgtttgaaaaacatggaagtatggcacaaccacagaagaagaaggctgtcgtagcc
ctcagagactgcatagagctcttcactactatggaaacgcttggtgaacatgacccgtgg
tactgccctaactgtaagaaacatcaacaggccacaaagaagtttgacttgtggtctttg
cccaggattttggtagtgcatttaaaacgcttctcatacagcagatactggagggataaa
cttgacactgttgtggaattccctatcaggggtttaaacatgtccgagttcgtctgtgac
ccaagagcaggctcatacgtgtatgacctcattgcagtttccaatcactatggagccatg
ggagtaggccactacactgcctacgcaaagaacaaagtgaatgacaagtggtactacttc
gatgacagcagtgtatccgtggcttcagaagaccaaatagtgacaaaagctgcgtatgtg
ctcttttatcagcgccgaaacaatgaggaacatactgccccatctcctccccaggaagag
tgtgacggcatggataccaactaa
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