Apaloderma vittatum (bar-tailed trogon): 104273120
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Entry
104273120 CDS
T08559
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
104273120 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104273120 (SPATA13)
Membrane trafficking [BR:
avit04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
104273120 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
DUF5560
Motif
Other DBs
NCBI-GeneID:
104273120
NCBI-ProteinID:
XP_009866634
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MRFFTTPRKRANSSSDRPRSLVLMGNSSTWNALSSIRKMGSFKKLKSSVLQGSQTRECPD
ILNENGVGKHGSNGAVMRVQTNRYSYSGPLHDFQNSVEGLASDCSDAEESDESFLRNTHR
SRSIRRAYGAGRINLLDTDKVQSHQNCTRPTSPVITEPKICEILVKDSENNRIVYRRSKS
SDNLNFLKKSSFKRKSTSNLTDLKVENEKQMPARTVSVTSADSDKSGGNPERRSKRWKSP
IRAKDFDRVLKLVSNVTDVAWKKDGPKSTAPSPSESHRTRSNSRLHDDYSRRVSSSTDHD
RKRCASPVSSPDASFPGTPCLQSPTVAQDKEAEMSVVLAEDKSLRTSSGIPDSDSLSPTL
NDISPFPNEVFYSDSDEPKASQQFTCEVETAHVPVRPTTPKPKSPTAEKVKCNMNFQCPN
RHSTLSLSSSESEERVEGLKLGRNPVCFQDSVQTVYCDDGNEDSGISSHSQLSLNLASSA
EEKKEEVVSDDHWKKSSSQDEEKADTQKVTPRRWGSGKRSRPRPLSDYGQMSIRSFSIPE
DAVAVESQKTNCADGENQPGLASGRSVIQSSTVGYHRGRKRRPISVIGGVSFYGSGPPEE
IEGLLTQPVTRPPVPAHQVPPYKAVSARFRPLTFSQSTPIGLDRVGRRRQMRTANVAADG
GTESSALVDDNGSEEDYSYEELCQATPRYLQPGGEQLAINELISDGSIVYAEALWDHVTM
DDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVRLRVNQEEVPENCSSIQDEE
QDADISKHRQKIAENKDQMRTNVIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTAAQ
LSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSA
CIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEH
SDYNNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIVDWEGPDVLARSSELIHSGE
LTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRIDMDEMEIVDTEDGRDKDFN
INVKNAFKIINRTTEEIHLFCAKKQEDKKRWMEACESERRRVQEDKEMGMEISENQKKQA
MQNARKSRHGKIKGYNGCPVPPPHQSLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFW
HTFNKLTPFKK
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttttcaccacccctcggaaacgggctaattccagctctgacaggcctcgttct
ctggttttgatgggcaactcgtccacatggaatgctttgtcttccatcagaaaaatggga
tctttcaagaagctgaaatcttcagttctccaaggaagtcaaacgagggaatgcccagac
atcttaaatgagaatggtgtaggcaaacatggttcaaacggggcagtgatgcgagttcag
actaacaggtattcctattcggggcctctacatgatttccagaactcagtggagggttta
gcttctgactgctctgatgcagaggagagcgatgagtctttcctgaggaatactcatcgc
tcacgcagcatcaggcgggcttacggtgctggccgcataaacttgctagacaccgataaa
gttcagagtcatcaaaactgtactaggccaacatctcctgtcatcactgagccaaagatc
tgtgaaattttggtgaaagactctgaaaacaacaggatcgtttatcggagaagcaaaagt
tcggataatttgaactttctgaaaaaaagctcgttcaaacggaagtcaacctcaaacctc
accgacctcaaggttgaaaatgaaaaacagatgccagcgaggactgtgagtgttacttct
gctgactcggacaaaagtggtgggaacccggagaggagatccaagcgatggaagagccct
atcagggcaaaggattttgaccgagttttgaaacttgtcagtaatgttacagatgttgca
tggaagaaggatggccctaagagcacggctccttctcccagtgagtcccacagaacaagg
tcaaacagcagactgcatgatgactactcccgcagggtttccagcagcacagatcatgac
agaaaaagatgcgcctctccagtgtctagtccagatgcttcttttccaggaacaccttgt
ctgcaaagccccacagttgctcaggataaagaggctgaaatgagtgtagtccttgctgaa
gacaaaagcctcaggacgtcatcgggtatcccagactctgacagtttatcacccacgctg
aatgacattagtccctttcccaatgaagtgttttattcggattcagatgagccaaaagct
agccagcagtttacatgtgaagttgaaactgctcatgttccagtcaggccaactactcca
aagcctaaaagtcccaccgcagagaaggtcaagtgcaatatgaactttcagtgcccaaac
cgtcacagcacgctgtcactgagctcatcagagagcgaggagagagtcgaggggctgaag
ctgggcaggaatcctgtttgcttccaggactcggtgcaaactgtgtactgtgatgatgga
aatgaagacagtggcataagcagccactctcagctgagcctcaatttagcctctagtgct
gaagagaaaaaggaagaggttgtttctgatgaccactggaagaagtcctcatcccaggat
gaagaaaaggcagacactcaaaaggtgacgcccaggagatggggctctggaaaaagatct
cgccccagacctctctcagactatggccaaatgtcgatcagaagcttctctataccagaa
gatgcagttgcagtggagtctcagaagacaaactgcgcagatggagaaaatcagccaggg
ctggcttccggcaggtctgtgatccaaagcagtacagtaggctaccacagagggcgaaaa
agaagacccatctccgtaattggtggggtcagtttctatggaagtggcccgccagaagag
atagaaggactgctgacacaacctgtaacccggccacccgttccagcacaccaggtaccc
ccgtacaaagcagtttcagccaggttccggcccctcaccttttcacaaagtacccccatc
ggcctggaccgagttggacgaaggcggcagatgagaacagctaacgttgctgcagatggt
gggactgagtcttcagccttagtggatgacaatggcagtgaggaagattacagttatgag
gagctctgccaagccacccccaggtacctgcagcccggaggggagcagctagcaattaac
gagctgataagcgatggcagcattgtctatgcagaagctctctgggaccatgtgactatg
gatgatcaagagctgggcttcaaagctggagatgtcattagagttctagaagcttccaac
aaagactggtggtggggaaggaatgaggacaaggaagcctggtttccagctagctttgtc
aggctgcgagttaatcaggaagaagtaccagaaaattgcagtagtatccaggatgaagaa
caagatgcagatattagcaagcatcggcagaaaatagctgaaaacaaggatcagatgaga
accaacgttatacaggaaattatgaacacagaacgagtctatatcaagcacctcaaggac
atctgtgagggttatattcggcagtgtcgcaaacatacaggaatgttcaccgcagctcag
ttaagcaccatctttggaaatattgaagatatctacaagttccaaaggaagtttctgaag
gatcttgaaaaacagtacaacaaagaggaacctcatctaagtgaaatagggtcatgcttt
cttcaacatcaagaaggctttgctatttattcagagtattgcaacaatcatcccagtgcc
tgcattgaactttccaagctaatgaaacagggaaaataccgtcacttctttgaggcctgt
cgcttgcttcagcagatgattgacattgccattgatggttttcttctcacacctgttcag
aaaatctgcaaataccctctgcagcttgcagaattgctcaaatacaccactcaggagcac
agtgattataacaatataaaagctgcatatgaggctatgaagaacgtagcgtgcctgatc
aatgagcggaaaagaagactagaaagcatagacaagattgcacgttggcaggtctcaatt
gtagactgggagggaccagatgtgttagccagaagctcagaactgatccactcaggagaa
ctgaccaaaatatcaaagcaaggcaaaagccagcagaggactttcttcctttttgaccat
caacttgtgttctgtaagaaggacttactgagaagggacatcttatattataaggaccgt
attgacatggatgagatggaaattgtggacactgaagatggcagagacaaagactttaac
attaatgtcaagaatgcttttaagataataaacagaaccacagaagagattcatttgttc
tgtgcgaaaaaacaggaagataaaaagagatggatggaagcatgcgaaagtgaaaggaga
agagttcaggaagacaaggaaatgggaatggaaatctcagaaaaccagaagaaacaagcc
atgcagaatgctcgtaagtcaagacatggaaaaattaaaggctataacgggtgtcctgtg
cctcctccacaccaaagcctgcatcctattcatcagcgccacatcactgtgcctaccagc
atcccgcagcagcaggtttttgccctggcagaacccaagcggaagccatcgctcttctgg
cacaccttcaacaaactcaccccctttaaaaagtga
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integrated database retrieval system
