KEGG   Apaloderma vittatum (bar-tailed trogon): 104273262
Entry
104273262         CDS       T08559                                 
Symbol
CIITA
Name
(RefSeq) LOW QUALITY PROTEIN: MHC class II transactivator
  KO
K08060  MHC class II transactivator [EC:2.7.11.1]
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit05164  Influenza A
Brite
KEGG Orthology (KO) [BR:avit00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    104273262 (CIITA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:avit01001]
    104273262 (CIITA)
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:avit04054]
    104273262 (CIITA)
Enzymes [BR:avit01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     104273262 (CIITA)
Protein kinases [BR:avit01001]
 Serine/threonine kinases: Other
  TAF1 family
   104273262 (CIITA)
Pattern recognition receptors [BR:avit04054]
 Cytoplasmic pattern recognition receptors
  NOD-like receptors
   104273262 (CIITA)
SSDB
Motif
Pfam: NACHT NLRC4_HD2
Other DBs
NCBI-GeneID: 104273262
NCBI-ProteinID: XP_009866829
LinkDB
Position
Unknown
AA seq 875 aa
RTKVDIWQYFMFLAGNLNLDETSAENTEKFADMKAQKCHKRSFLGSAESCSGASEPKYKK
IVEVPALSTGNGSFLAMPLSSHPVTSTSLTNQHVSLSVPATGVLERSFLIPGFSAPLIPE
CLPVSVKGSQESGGFADPPQQIINFVLENGTPDVIIYPVLSSSMETLISPSFAVSLCGLE
MFKEAQVPIVPSEEPFKRPKPVEAFRTSLMDYFRDMCKSVATEREVTLDHLFVDGTLVQS
QTETKNGKNSGKTVEKELVTCNLQGKEKTALQTSQIFQNLGGKDLETKVVVVLXMGKSIL
VQKICQDWSNGEFPQFEFVFWFDCKQISLPEKRYSLKDLLLEFFVKPQEGSKEIFEYILQ
NPAKVLLAFDGFEGLHDHENFPRCSTGQPEQDLCRVKELLSGLIQKKLLNGCTLLLTARP
KDKVFQCVSKVDKTVEIVGFSPQQRELYITKYFEGLPCCGSALKLIKESEYLFSHCYSPV
MCRFVCFLCEAVLGTGDRSLPSTLTAVFLKFVQQKVIPVQTDVTAVQSQESLATLAHVAW
YLGEKHQNAMKSDLLPSKKVKEFALKCGFFLPCAFLMHSDSGEEEFGSTFSDFVIQNFLG
ALHLMLAEDIKDKSITKYLPFSSKKKKPYNWLELVPRFLAGLLFLQDDPYFCSLSNKDAN
QTTKKQKTFLKYVRRLQINELWPERLLELLHCIYETQSNYLLQHVSLRLKPHLSFLDVVL
TPPDVHVLHSVLKRSKKEFSLDLRNSSIDVRGLKHLVALKNVASFRASLSDTVRLWKALE
QAKDYELLRVSTEKFVLDPFKAKTMKDVSDLSDLVELQEKMSSCVEDASGCSSYEIPALR
NLRKLEFALGPVCGLQGFLKLVEILAAFPSLQHLE
NT seq 2629 nt   +upstreamnt  +downstreamnt
gagaacaaaagttgacatttggcaatatttcatgtttttagcagggaacctcaatttgga
tgaaacatctgctgaaaacaccgagaaatttgctgacatgaaggcgcagaaatgtcacaa
acgaagcttcttgggctccgcagagagttgctctggtgcttcagagcctaaatacaagaa
aattgtggaagtccctgcactgtctacagggaatggcagtttcttagctatgcccctcag
cagccacccagtgacctccacctcgctgactaaccagcacgtgtccctttctgttcctgc
tactggtgtgttggaaagaagcttcctcattcctggattttcagcacctttgattccaga
gtgtctacctgtcagtgtgaaagggagccaagagagcggaggcttcgcagatcctcctca
gcagataattaactttgttcttgaaaacggcacacctgatgttataatatatccagtgct
gtcatcttccatggaaacattgatatccccaagttttgcagttagtttatgtggtttaga
aatgttcaaagaagcccaagttcccatagttccttctgaagaacctttcaaaagaccaaa
gccagtcgaagctttccgtacgtcacttatggattatttccgagacatgtgcaaatctgt
ggccacggagcgtgaagtaactcttgatcacctgtttgttgatgggacgcttgttcaatc
ccaaactgaaaccaagaatgggaagaatagtggaaaaacagtggaaaaggagctggtcac
ttgcaatctgcaagggaaggaaaagacagcccttcaaacaagccaaatatttcaaaactt
gggaggtaaagaccttgagactaaagtggttgtggtgcttnnaatgggcaaaagcattct
tgttcagaagatctgccaggactggtccaacggcgagtttcctcagtttgaatttgtatt
ttggttcgactgcaaacaaattagcttgcctgagaagcgatacagcctgaaggatctgct
gcttgaattttttgtaaagcctcaagagggaagcaaagagatctttgagtacatattgca
aaatcctgctaaagtccttctggcttttgatggttttgaaggattgcacgatcatgagaa
ttttcctcgttgctcaactggccagcctgaacaagacttgtgccgtgtaaaggagctgct
ttccgggctcatccaaaaaaagctactcaatggttgtacattattacttacagcaagacc
gaaagacaaggtgttccagtgtgtgtccaaagtggacaagactgttgaaatagtggggtt
ttcccctcagcagagagaactgtacataaccaaatactttgaaggattaccctgttgtgg
gagtgcactgaaattaatcaaagagagtgagtacttgttcagtcattgttacagccctgt
tatgtgtcgatttgtttgttttctctgtgaggccgtacttggaacgggagaccgaagcct
tccttccactcttactgcagtcttcctgaaatttgttcagcagaaggtaatacctgtgca
aacagatgttacagccgtgcaaagtcaagagagtcttgctacactagcccacgtagcctg
gtatcttggggaaaagcaccaaaacgccatgaaaagcgatcttcttccttcaaagaaagt
taaagagtttgctctgaaatgtggatttttcctgccatgtgcattcctcatgcattcaga
tagtggagaagaagagtttgggagcacattttctgattttgtcattcagaatttcttggg
tgctcttcaccttatgttagcagaagacatcaaggataaaagtataacaaagtacctgcc
tttttcatccaagaagaaaaaaccttataactggttagaattagtgcctcgatttttggc
tggattgttgttcctccaggatgacccctacttctgctctctctcaaataaggatgcaaa
ccaaacaaccaagaagcagaaaacattcttgaaatatgttagaaggctgcaaatcaatga
gctctggccggagaggttactcgagcttttgcattgcatttatgaaacacaaagcaatta
tcttttgcagcatgtgtccttaaggctgaagccacacctgtcttttctggatgtagttct
tacaccacctgatgtccatgtactgcattctgttttaaaaaggtcaaaaaaagagttttc
cttggatttacggaacagcagcattgacgtgcgagggctaaaacacctggttgccctaaa
gaatgtggcatcgttcagggcctccctcagtgatacagtcaggctctggaaagctttaga
acaagcaaaagactacgaactcctgagagtatcaacagagaagtttgttcttgatccctt
taaggcaaagacaatgaaggacgtcagtgacctttcagaccttgtagagctgcaggagaa
gatgagcagctgtgtggaagatgcatctggttgcagcagctatgaaatccctgccctcag
aaacctcagaaaactagaatttgcgctgggtccagtatgtggcctgcagggattcttaaa
actcgtggaaattcttgcagcatttccatcacttcagcatttagagtga

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