Apaloderma vittatum (bar-tailed trogon): 104273538
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Entry
104273538 CDS
T08559
Name
(RefSeq) retinal-specific ATP-binding cassette transporter-like
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104273538
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avit02000
]
104273538
Transporters [BR:
avit02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104273538
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
SRP54
Motif
Other DBs
NCBI-GeneID:
104273538
NCBI-ProteinID:
XP_009867200
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
GTMGYHSLGISLCRNLTGLALETQKLRKQQLLMKSEEPEKPEEKINTFFEPEPTGLIPGV
CLQNLVKIFANRPKPAVDGINITFYEGQITAFLGHNGAGKTTTMSILTGLFPPTSGTVLI
GGLDIQTHMDSIRHRLGMCPQYNILFNHLTVAEHILFYSQLKGRSRDEAEQELEAMLEDM
GLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVVVLDEPTSGVDPYSRRSIWDLLLKYRS
GRTIILSTHHMDEADILGDRVAIISQGKLFCSGSPVFLKNCFGSGFYLTLVRKMKNTRIR
RAASLCSCGSQCSCSCSSCARSYREEAPELELDGDLNELAEVIHHHIPEAKLIESIGQEL
IYLLPNKNFKQRSYASLFRELEETLDDLGLSSFGVSDTPLEEVFLKATAEADPGVQKAGD
TQEDGSTLGKTSTENKPAEKNTLKTNDASRMPVGRAGEQNEGRGSRQYKGFQLVQQQIRA
LLIKRFHHASRSHKDFLAQIVLPASFVLLSLILTVIIPPFGEYPPLTLHPWIYGQQFTFF
SNERPGNEQMVSLTHAFLNKPGFGNRCMKNQPLPNYPCEYMPSAWTTPAVHPNLSNLLLS
QKWSPENPSPSCKCSTDKKLTMLPECPAGAGGLPPPQRVQHSTEILQDLTHGNISDFLVK
TYPALIKGSLKSKYWVNEQRYGGISIGGRLPVLHVSGDQIVNFLSGLGQMMNVTGGQTSL
AAAKEISNFLKYMETEDNIKVWYNNKGWHAMVSFLNVANNAILRANLRTGQAPEEYGITA
VNHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMSFIPSSFVLYLIQERVTKAKHLQFVS
GVSPAIYWLTNFMWDIVNYAVSAGMVVLIFIGFDKKAYTSPSNLPVLVALLLLYGWAVIP
MMYPASSFFSVPSTAYVALSCINLFVGINSSAITFILELFENNPSLLKFNKILKNVLIVF
PHFCLGRGLIDLAMNQAVTEVYARFGEEHVSNPFQWDFVGKNLVAMAVQGVAFFTLNLLM
QHRLFSTRWFAGTAMPPIIGEDEDVAEERKRIMNGGNKTDILELQELTKIYAGRHKPAVD
RLCIGIHPGECFGLLGVNGAGKTTTFKMLTGDTDVTSGDAVVAGSSILTHISSVHQNMGY
CPQFDAIDDLLTGREHLYLYARLRGVPAGEIKRVAEWGIQKLGLPMYADHLAGTYSGGNK
RKLSTAIALIGCPPLVLLDEPTTGMDPQSRRLLWDSIVSVLRDGRAVVLTSHSMEECEAL
CTRLAIMVKGTFKCLGTIQQLKYKFGDGYIVTLKIKAPKSGLPPDPTPAEQFIRMNFPGS
LQREKHYNMLQYQICSSSLAKIFRLIISNKENLHIEEYSVSQTTLDQVFVNFAKQQMEDE
EIPLHPRAAGASREAKVAPALHQQAVA
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gggactatgggctaccacagccttggtatttccctgtgcaggaatcttactggcttggct
ctggaaacccaaaagttgagaaagcagcaactgctgatgaaatctgaagaacctgaaaaa
ccagaagaaaagataaatactttctttgagcctgagccaacaggattgattccaggagta
tgccttcagaacctggtgaagatttttgcaaacaggcccaagccagcagttgatgggatt
aacattactttttatgagggccaaatcacagcctttcttggtcacaatggagcaggaaag
acgaccaccatgtcgatactgacaggcctcttcccacccacctctggaaccgtgctgatt
ggcggcctggatattcagactcacatggactccattcggcacagattaggcatgtgtcct
cagtacaacatcttattcaatcaccttactgtagcagagcacatcttgttttactctcaa
ctgaaagggagatctagggatgaagctgagcaagagttggaagccatgctagaagacatg
ggcctcacccataaaaggaatgaagaagctcagaatttgtcaggtggaatgcaaaggaaa
ctgtctgttgccattgcttttgtgggtgaagcaaaagtggtagtcttggacgagcccact
tctggagttgatccttattccaggcgatctatctgggatcttctgctcaagtatcgctca
ggcagaaccatcatcctctcaacccatcacatggatgaggcagacatccttggagacaga
gtagccatcatatcccaagggaaactcttctgctcaggctctcctgtattcctaaaaaac
tgttttggttctggcttctatctcactcttgttcgcaagatgaaaaacaccagaattaga
agggctgcgtcactgtgtagctgtgggtctcagtgctcctgctcctgctccagctgtgca
cgcagttacagagaagaagctccagagctggaactggacggagatctgaatgaactagca
gaagtaattcatcatcatatcccagaagcaaaattaattgaaagcattggacaggaactc
atttaccttttacccaataaaaactttaaacaacgatcttatgccagtctcttcagagaa
ctggaagaaacattggatgacctgggacttagcagttttggagtttcagacacgccactt
gaagaggttttcctaaaggccacagcagaagctgacccgggagtgcaaaaagcaggagac
actcaagaagacggttctactcttggcaaaacttccactgagaacaaaccagctgaaaaa
aacacactgaaaactaatgacgcttctcgaatgccagtaggcagagcaggagagcaaaat
gaaggcagagggtcccgacagtataaaggttttcagcttgtacaacagcagatcagagca
ctgctcatcaaacggttccaccatgcctcccgaagccacaaagacttcctagcccagatt
gtcctccctgctagttttgtgctgctgtctttaatacttacagtcattattcctccattt
ggagaatatcctcccttaaccttacacccttggatctatggacagcagtttactttcttc
agcaatgagcgtcctggcaatgagcagatggtctccctcactcatgctttcttgaataaa
ccaggatttggaaatcgctgcatgaagaatcagcctcttccgaactacccgtgcgaatat
atgccatctgcctggaccacacctgctgttcatcctaatctaagcaacctcctactgagc
caaaagtggagccctgagaatccttcgccttcctgcaagtgcagcactgacaagaaactc
actatgctgccagagtgccctgcgggcgcaggaggcctcccaccaccacagagagtgcag
catagcacagaaattcttcaagatctgacccacggaaatatttcagattttctggtgaaa
acatatcccgctttgataaaaggaagcttgaagagcaaatactgggtcaatgagcaaaga
tatggaggaatttctataggaggaaggcttccagtccttcatgtttctggagatcaaatt
gtcaattttttaagtggtcttggccaaatgatgaatgtgacaggagggcagacttcactg
gctgctgctaaagaaatttctaatttccttaaatacatggaaactgaagataatattaag
gtgtggtataacaataaaggctggcatgctatggttagtttccttaatgtagccaataat
gcaatccttagagctaacctgcggactggccaggcccctgaggagtatgggatcactgct
gtaaaccaccctctgaacctcactaaggagcaactctctgaagtcactgtgctgaccact
tctgtggatgctgttgttgccatctgcgtgatttttgctatgtcctttataccatccagt
tttgttttgtacctgattcaagaacgtgtaacaaaagccaaacatttacagtttgtcagt
ggtgtgagccctgcgatctactggctaactaacttcatgtgggacatagtgaattatgca
gtgagtgctggaatggttgtgcttatattcattggattcgacaagaaagcttatacttct
ccaagtaatcttcctgtgcttgttgccttgctacttctgtatggatgggcagtaattccc
atgatgtacccggcttcttctttcttcagtgtccctagcactgcttatgttgcactgtct
tgtattaatctctttgtggggatcaacagcagtgccattacattcattctggagttattt
gaaaataacccgtctttgctgaagttcaataaaatattgaaaaacgtgctgattgtcttt
ccgcacttttgcctgggccgtggactcattgacttggccatgaaccaagctgtgactgaa
gtatatgccaggtttggcgaggagcatgtttccaacccctttcagtgggactttgttggg
aagaacctggttgccatggctgttcaaggggttgcattcttcactctgaatctccttatg
cagcaccgtttgttctccacaagatggtttgctgggactgctatgccacctattattggt
gaagatgaggatgttgcagaagaaagaaaaagaattatgaatggtgggaacaaaacagat
atcttagaattacaagaattgaccaagatttatgcaggtaggcacaagcctgcggtggac
agactctgcattggcatccatcctggagagtgctttggtcttttgggagtgaatggtgct
ggcaaaacaacaacgttcaaaatgctaactggcgatacggatgtgacatccggagatgct
gtcgtggctggtagtagtatattgacacacatttctagtgtccatcaaaacatgggatac
tgtcctcagtttgatgccatcgatgacctgctcactggacgagaacatctctatttatat
gcacgcctgcggggggttccagcaggggaaatcaagagggttgctgaatggggcatccaa
aagctgggacttcctatgtacgcagaccacctggctggtacctacagcggtggcaacaag
cgcaagctctccactgccattgcactgataggctgcccaccactcgtcttgctagatgaa
ccaactactggaatggaccctcagtcccggcgtctcctgtgggactctattgtcagcgtg
ctcagagacgggcgagctgtggttctaacctcacacagtatggaagaatgtgaagccctc
tgtactcgtttagccatcatggtaaaaggtaccttcaaatgcctgggcacaattcagcaa
ctaaaatataagtttggagatggctacattgtcaccctgaaaatcaaagctccaaagtct
gggttacctccagatcctacacctgctgagcaattcatacgcatgaactttccagggagt
ttgcagagggagaagcactacaacatgctgcagtatcagatttgctcctcctctctggct
aagatttttcggttaataatctccaataaggaaaacttgcatattgaagaatattctgtg
tctcaaacaactttagatcaggtttttgtgaactttgctaaacagcagatggaagatgaa
gaaattcctttgcatcctcgggcagctggagccagccgagaagcaaaggtggcccctgct
ttgcatcagcaggcagttgcataa
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integrated database retrieval system
