Apaloderma vittatum (bar-tailed trogon): 104273595
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Entry
104273595 CDS
T08559
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
avit03400
]
104273595
Enzymes [BR:
avit01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
104273595
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
104273595
Prokaryotic type
104273595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
104273595
NCBI-ProteinID:
XP_009867267
LinkDB
All DBs
Position
Unknown
AA seq
462 aa
AA seq
DB search
SVREFKYNKKRVRLISQGSDLKDDARCILYWMSRDQRVQDNWAFLYAQRLALKQELPLHV
CFCLVPKFLDATIRHYGFMLRGLQEVAKECAELNIPFHLLLGYAKDVLPAFVVEHGVGGL
VTDFSPLRLPRQWVEDVRERLPEDVPFAQVDAHNIVPCWVASSKQEYSAWTFRSKINAQL
PWFLTEFPPIIRHPYPPSCSAEPIAWEACYSSLQVDRTVKEVEWATPGTAAGLAVLQSFI
AERLKSFGSHRNNPNKAALSNLSPWFHFGQVSTQRAILEVQKHQHKYKESVDVFVEEAVV
RRELSENFCYYNENYDSVQGAYDWAQTTLKLHTKDKRPYLYKLQELEQGSTHDPLWNAAQ
LQMVREGKMHGFLRMYWAKKILEWTRSPEEALQFAIYLNDRYELDGRDPNGYVGCLWSIC
GIHDHGAVFGKIRYMNYAGCKRKFNVGEFERRYAPGDGHSVP
NT seq
1391 nt
NT seq
+upstream
nt +downstream
nt
cgtccgtgcgagagttcaagtacaacaaaaagcgggttcgcctcatctcgcagggctcag
acctgaaggatgatgcccggtgcatcctttactggatgtcccgcgaccagcgggtgcaag
ataactgggctttcctctacgcccagcgcctggccctcaaacaggagctgcctctgcacg
tttgcttctgcctggtgcccaaattcctggatgccaccatccgccactacggtttcatgc
tgaggggcctgcaggaggtggccaaggagtgtgcagagctgaacatccctttccacttgc
tgctgggctatgccaaggatgtgctgccagcatttgtggtggagcatggcgtgggtgggc
tagtgacagacttcagccccctccgcctcccccggcagtgggtggaggacgtcagggaga
ggttgcctgaggatgtgccatttgcgcaggttgatgcccacaacattgtgccctgctggg
tcgcctcctccaagcaggagtacagtgcctggaccttccggagcaagatcaatgctcagc
ttccctggttcctcaccgagttccctcccatcattcgtcacccgtatccaccctcctgct
ctgcagagcccattgcttgggaggcctgttattccagcctgcaggtggaccgcactgtga
aggaggtggagtgggcgacccctggcacggccgcagggctggctgtgttgcagtccttca
tcgcggagcggctgaaatcctttggctctcaccggaacaaccccaacaaagcagcactca
gcaacctgtctccatggttccacttcggccaggtttccactcagcgagccatcctggagg
tgcagaagcatcagcacaagtacaaggagtcggtggacgtgttcgtggaggaggctgtgg
tgcggcgggagctgtctgaaaacttttgctactacaatgagaactacgacagtgttcaag
gtgcctacgactgggcgcaaaccacgctgaagctccacaccaaagacaagaggccttatc
tctacaagctgcaggaactggagcaggggagcacgcacgacccactctggaatgctgccc
agctccaaatggtccgggagggcaagatgcacggcttcctgcggatgtactgggctaaga
agatcctggagtggacccgctcgccagaggaggccctgcagtttgccatctacctcaatg
accgctacgagctggatgggagggaccccaacggatacgtaggctgcctctggtctatct
gtggcatacacgaccacggagctgtcttcggcaagatccgctacatgaactacgctggct
gcaagcgcaagttcaacgtgggagagtttgagcgtcgctacgcccctggtgacgggcaca
gcgtgccttga
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