Apaloderma vittatum (bar-tailed trogon): 104273747
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Entry
104273747 CDS
T08559
Symbol
ABCA3
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104273747 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
avit02000
]
104273747 (ABCA3)
Transporters [BR:
avit02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
104273747 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_22
RsgA_GTPase
AAA_23
DUF4162
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
104273747
NCBI-ProteinID:
XP_009867465
LinkDB
All DBs
Position
Unknown
AA seq
1709 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRQILVTVIEICLPLLFAAILIALRHRVHSISHPNATLYPAE
AVDDLPGFFYRRHPSNPWELAYVPSNSSAVRAVAEAVERALPISIRAQGFASERDFEVRS
ANRSGSVLAAVVFQHRFQHSAAPLPLQVNYELRFKYSPRNAPRSEQTGLNPNLDRDWHTS
YLFPLFQLPGPREAKFADGGTPGYIREGFLALQHAVDRAIIQYHANASSTSLLENVTVVV
QRFPYPAYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMHMMGLSNW
LHWSAWFLMFFLFLLVSVFFVTVLFCVKVSEQGAVLTNSDPTLVFTFLAIFSISSISFNF
MVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSHSQKLASCLISNVAMAMGAQLI
GMFEGKGTGVQWRDLMKPVSVDDNFTLAQVLGMLLLDSVLYGVVAWYVEAVFPGEYGVPQ
PWYFFLTPSYWCGRPRTVVGKEKEEEEDPEKALKSQYIEEEPADLVSGIKIKHLSKVFRV
GNKTKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSMLLRLAPPRSSTGGQASINGYEIS
QDMVLIRRSLGLCPQHDVLFDNMTVEEHLHFYAGLKGYPPSKCPEEIDHILRILNLEDKR
RSLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASRRATWDLLQQQRSNRTILL
TTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHMVMVKEPYCNLGEISRLIC
HYVPNATIESNAGAELSFILPKESTHRFEALFTELEQRREELGIASYGASVTTMEEVFLR
VGKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMTDMTDDSGALITEDCSSIK
LNTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLIFTAFALVVAKTFPGPRDSSSL
RLTLEPYGQTIVPFSVSAASGLSQRLAEQYVELLDAQHQSPLEVVGGLEEYLISRASEEG
GAFNEHYIAAASFEGAGNRTVVTALFNNQAYHSPATALMLADNAVFRVLAGPNASITVTN
YPQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALLLVSERAIKAKHVQFVSGV
YVVNFWLSALLWDIINFLIPCALMLVIFQAFDVQAFTQDSHLVDVMLIFLLYGWAIIPLM
YLLSFFFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGLVDLSKTLDKVFLVLPNYC
LGQCISDFYQNYEFIQFCTSSVEAIFICKAFNVTYQMNYFSWETPGIGRYLTSLTIQGFS
FLFLLFLIETNLLWRLRTLVCGICRRRKWVALLNRVSALPEDRDVADERKKVLESPPELL
SSLSSPLVIKELTKVYDSRESLLAVDRISLAVSKGECFGLLGFNGAGKTTTFKMLTGDES
ITSGDAFVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRETLSMYARLRGIPERYIGSC
VENMLRGLLLEPHADKLVRNYSGGNKRKLSAGIALIGGPPVIFLDEPSTGMDPVARRLLW
DAVTRTRECGKSIIFTSHRXQFCEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLLAK
TRSEEEGELQAFKAFVEKTFPGSVLKHEHQGMVHYHLTNKNLSWAQVFGALEKAKEKYRL
EDYSVSQISLEQVFMSFTRFQHYTEDRGK
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggttgttctcaggcagtttgggctgctgctctggaagaattacattcttcagaaacgg
cagatcctggtgacagtcatcgaaatctgcctgccactgctcttcgccgccatcctgatt
gcgctgcggcaccgggtgcactccatcagccaccccaacgccaccctctaccctgccgag
gccgtggatgacctgccgggcttcttctaccgccggcaccccagcaacccctgggagctg
gcctatgtcccctccaacagcagtgccgtcagggccgtcgccgaggcggtggagagagct
ttacccatcagcatcagagctcagggcttcgcctcggagcgggacttcgaggtcaggtcg
gccaaccgctcgggcagcgtgctggccgctgtcgtgttccagcaccgcttccagcacagc
gcggccccgctgccgctccaggtcaactatgagctgcgcttcaagtacagcccgaggaat
gcgccacggagcgagcagacggggctgaaccccaaccttgaccgggactggcacaccagc
tacctcttccccctcttccagctgccggggcctcgggaggccaagtttgctgatgggggg
acaccaggctacatccgagaaggtttcctggccttgcagcacgcagtggacagggccatc
atacagtaccacgccaacgccagctccaccagcctcctggagaacgtcacggtggtggtg
cagcgcttcccctacccngcgtacgtcaacgacctcttcctccttgccatccagaaccag
ctgcctctgctgctcatgctcagcttcacatacacctctctcaatattgtccgtgccgtt
gtgcacgagaaggagaagaagctgaaggagtacatgcacatgatgggcctcagcaactgg
ctgcactggagcgcctggttcctcatgttcttcctcttcctcctggtgtccgtgttcttc
gtcaccgtgctcttctgtgtcaaggtgagtgaacagggagcggtgctcacaaacagcgac
cccacgctggttttcaccttcctcgccatcttctccatctcctctatctccttcaacttc
atggtgagcaccttcttctccagagcgaatgttgcggctgctgctggcggtttcctctac
tttttctcctacatcccttacttcttcatctcgccccgctacgacctgatgtcgcacagc
cagaagctggcgtcctgcctcatctccaacgtggccatggccatgggggcacagctcata
ggcatgttcgaagggaaagggaccggcgttcagtggagggacctcatgaagcccgtcagc
gtggacgacaacttcactttagcccaagtgctggggatgctgctcctggactcggtgctc
tacggtgtggtggcctggtacgtggaggccgtctttccaggggagtacggcgtgcctcag
ccctggtacttcttcttgacgccctcgtactggtgtgggcgccccaggactgtggtggga
aaagagaaggaggaggaggaggaccccgagaaagctctgaagagccagtacattgaggag
gaacctgccgaccttgtgtcaggaatcaaaataaagcacctttccaaggtcttcagagtg
ggaaacaagacaaaagaggcagtcaaggacttaacggtgaacatgtacgaaggccaaatc
accgtcctgttgggacacaatggtgctgggaagaccaccactctctccatgctgctgcgt
ctcgctcctcccaggtcttcgacgggcggccaggcgtccatcaacggctacgagatctcc
caggacatggtcctcatccgccgcagcctgggcctgtgtccccagcacgacgtcctcttc
gacaacatgacggtggaggagcacctccacttctacgcagggctgaaggggtacccaccc
tccaagtgccctgaggagatcgaccacatcctgaggatcctcaacctggaggacaaacgt
cgctctctgaccaaggctctttccggtggcatgaagcgcaagctctccattggcatcgcc
ctcatcggggactccaaggtggtgatgctggatgagccgacgtcggggatggacccggct
tctcgccgggccacatgggaccttctgcagcagcagaggagcaaccgcaccatcctgctc
accacccacttcatggatgaggctgacctgctgggggaccgcatagctatcatggccaag
ggcgagctgcagtgctgtggctcctcactcttcctcaagcgtaaatacggggcgggatat
cacatggtgatggtgaaggagccctactgtaacctgggggaaatctcccgcctcatctgt
cactacgtgcccaacgccaccatagagagcaatgccggggcagagctgtccttcatcctg
cccaaggagagcacgcacaggtttgaggccctattcacagagctggagcaaaggcgggag
gagctgggtatcgccagctacggcgcctcggtcaccaccatggaagaagtcttcctgagg
gttgggaaacttgtggactctagcatggacatccaggccatccagctgcctgctctccag
taccagcacgagagacgctccaacgactgggccatggatgactcaagcagcctgagcggc
atgacggacatgacggatgacagcggggcactcattacggaggactgctccagcatcaag
ctcaacaccgggttctacctgtgctgccagcagttctacgccatgttcatgaagcgagcc
atgtacagctggcgcaactggaagatggtggcagcgcagttcctcgtgcctctgatcttc
actgccttcgccctcgtcgtggccaagaccttcccaggacccagggactcttcctcactg
aggttgacactggagccctacggccagaccatcgtgcctttcagcgtctcggccgcctcg
ggtctgtcgcagaggttggcggagcagtacgtggagctgctggatgcccagcatcagtca
ccgctggaggtggtgggtggcctggaggagtacctcatctcaagagcctccgaggaaggg
ggagccttcaacgagcactacatcgcagcagcctccttcgaaggagctgggaaccgtacg
gtggtcaccgcgctcttcaacaaccaggcgtatcactcccctgccacggcccttatgctg
gctgacaacgctgtcttcagggtgttggcaggtcccaatgcctccatcacggtcaccaac
taccctcagccccgcaacatcaccgagaaggccaaagaccagctcatggagggccagacg
gggttcgccattgctatcaacttgctctacggcatggcctcgctcgccagcaccttcgct
ctgctgctggtcagcgagcgggccatcaaggccaagcacgtccagtttgtcagtggagtc
tacgtggtcaacttctggctttccgccctgctctgggatatcatcaacttcctcatccct
tgtgctctgatgctggtgatattccaagcctttgacgtgcaagccttcacccaagacagc
cacctcgtagatgtgatgctgatcttcctcctttatggctgggccatcattcccctcatg
tacctcctcagcttcttcttctcagtggcagccacggcctacacccggctcaccatcttc
aacatcctctcaggcacggccaccttccttgcagtcaccatcatgagcatcccagagctg
ggcttggtggacctctccaaaaccctggataaagtctttcttgtcttacccaattactgc
ttgggccaatgcatcagtgacttctaccagaactacgagttcattcagttttgtacctcc
tccgttgaagccatcttcatctgcaaggccttcaatgtcacttaccagatgaactacttc
tcctgggagacgcctggcatcggacgatacctgacctctttgaccatccagggtttctcc
ttcctcttcctccttttcctcattgagacaaacctcctctggagactcaggactttggtc
tgtggcatctgcaggcggcggaaatgggtggcactgctgaacagggtgtctgcgctgcca
gaggaccgggacgtggcagatgagaggaagaaggttttggaatcgccaccagaactgctg
tcatctctcagcagccctctggtcatcaaggagctcaccaaggtctatgacagccgggag
tccctgctggcagtggacaggatctccttggcggtcagcaaaggggagtgctttggcctt
ctcggcttcaacggagcgggcaaaaccactaccttcaagatgctgactggtgacgagagc
atcacgtcaggggatgcctttgtggatggccacagcattctggccaacatcaagaaggtc
cagcagcggatcggctactgcccgcagttcgatgccctcctggaccatatgacaggccgt
gagaccctgagcatgtatgcccgcctgcggggcatccccgagcgctacatcggcagctgc
gtggagaacatgctgagagggcttctcctggagccccatgccgacaagctcgtgaggaac
tacagcgggggtaacaagcggaagctgagcgccggcatcgccctcattggtggtccccct
gtgatcttcctggatgagccctctaccggcatggaccccgtggcccggcgtttgctctgg
gacgcagtgacacggacgcgggagtgtggcaaatccatcatcttcacatcccacaggtga
caattctgcgaggccctctgcacgcggctggccatcatggtgaacgggcagttcaaatgc
ctgggcagcccccagcacctcaaaagcaaatttggcagtggctacacgttgctagccaaa
acgcggagcgaggaggagggcgagctgcaggccttcaaggcctttgtggagaagactttc
ccaggcagcgtcctgaagcacgagcaccaggggatggtacattaccacttgaccaacaag
aacctcagctgggcgcaggtctttggggccttggagaaagccaaagagaagtatcgcttg
gaagactactcagtgagccagatctccctggagcaggtcttcatgagcttcactcgcttc
cagcactacacggaggaccgggggaaatga
DBGET
integrated database retrieval system
