Apaloderma vittatum (bar-tailed trogon): 104274002
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Entry
104274002 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: protein SCAF8-like
KO
K13191
RNA-binding protein 16
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104274002
03041 Spliceosome [BR:
avit03041
]
104274002
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104274002
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104274002
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
104274002
NCBI-ProteinID:
XP_009867812
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
WETARSSEAAKENPQTTQSAAVDKSTVITTQTEAYTQPVTMLQIPVAPAVPAVSLVPPAF
PVTMSVPPPGYSAIPPPPFLRASFNPSQPPPGYMPPPVPPVVPPPVVPPPVVPPVVPTPL
VQPPLPIAQETMKDVPFTSLVLPVGTITSNLATPTLSAGSVFNPLPVTKPESDEKGSHLT
DLQISSSENNRSVQSDVSSSSGLGGVQPPSVSSNSGLTGEGQPPSVSSSSGLAGGVQPPS
VSSSSGLVGVQPPAVSSSSGLAGGVQLPTVSSSSSLVGGVQPPSVSSSSGLMAGVQPPNV
SSSSGLLAGVHPPSISSSPGLLTGMQPPSVSSSSGVLAGVQPPSVSSNSGLLLMPPPNVS
SSSGLMGVPPPNISSSSGLMAMQHPAGVQNMPHLSISSQRMPGMPLIDIRPGLMPHSPGP
RFPLXXXXXXXXXXXMPPQRSIPPPAILDPSLHPPPRGPFPPGDIFNQTERPFGTPGRQN
IDSIANPEKRLPLGGDNIQQEGDRDYRFPPVENRDNLNRPSPVDVRDSVGRPPVDPRESI
GRPPVDGREHFPRPHVDMRENFGRPSIDNLGRREHFGFNSDKHWGQRGDYDEREHHAFPI
YGGPKGFHEDRERFRHVNYRFDSRSGPNWNRGFEQDSHRDFDDRRRPWERQRDRDDRDFN
FCREINGNRFGRDRMSNNWIPPPHPRVFEYFDGATSQRKADNMPQVNGENTETESQPPTA
QVQDDPELYEKLTSSVEINKEKSDTEADIESEPVVESTETEGT
NT seq
2294 nt
NT seq
+upstream
nt +downstream
nt
aatgggaaacagccagaagctcagaagccgctaaagaaaatcctcaaactacacagagtg
ctgcagttgataagagtacagttattacaacacagacagaagcttacacacaaccagtca
ctatgctgcagattccagtagctccagctgtgcctgctgttagcttggtcccacctgcgt
ttcctgtgacaatgtctgtccctcctcctggttatagtgcgattcctcccccacccttct
tgcgagcaagtttcaacccttcgcagccacctccaggttatatgcctcccccagttccgc
ctgtggtcccaccacctgttgtcccaccacctgttgtccctccagtagttccaacaccct
tagtacagcctccattaccaattgcacaagagacgatgaaggatgttccttttaccagcc
ttgttctaccagttggcacaattaccagcaatctagctactccaacgttatccgctggaa
gtgtttttaatcctctgccagtcaccaaaccagaatcagatgaaaagggatcacatctta
cagaccttcagatttcttccagtgaaaacaatagatctgtgcaaagtgatgtctcgagta
gctctggacttggaggagtgcagccacccagcgtttcaagcaattctgggcttactggag
aaggacaaccacccagtgtctcaagtagctctggacttgcagggggagtacagccgccca
gtgtttcaagcagctctggacttgtaggagtgcaaccaccagctgtttcaagcagttctg
gtcttgcaggaggagtgcagctgcctactgtgtccagtagctcttctcttgttggtggag
ttcagccacccagcgtctcaagtagctctggacttatggctggagtgcaaccaccaaacg
tctcaagtagctcagggcttctcgctggagtgcatccacccagtatctcaagcagccctg
gccttctgacaggaatgcagccacccagtgtctccagcagctcaggagttctggcaggag
tgcagccaccaagtgtctcgagcaactctgggcttctcctcatgccaccacccaatgttt
caagtagttctggacttatgggagtgccaccaccaaatatttcaagtagttctggactta
tggcaatgcagcatccagctggggttcaaaacatgccccatttgagtatcagtagtcaaa
ggatgccgggaatgcctctcatagatatccgcccaggcctaatgcctcattcgcctggac
caaggtttccactgannnnnnnnnnnnnnnnnnnnnnnnnnnnnngaatgccaccgcagc
gtagtattcctcctccagcaatccttgatccgtctcttcacccaccacctcgaggtcctt
ttcctccaggagatatttttaatcaaacagaaagaccttttgggacaccgggaagacaaa
atattgatagcattgctaatccagagaaaagactaccacttggaggcgataacattcaac
aggaaggagacagagattatcgcttccctccagtggaaaaccgagataatcttaacaggc
catctccagtggatgtcagagattctgttggacgaccaccagttgatccaagagagagta
taggaaggcctcccgtggatggaagagaacactttccaagaccacatgtagacatgagag
agaattttggaagaccaagtatagataaccttggtcgaagagagcattttggtttcaatt
cagacaagcactggggtcagagaggagattatgatgaaagagagcaccatgccttcccta
tttacggtggccctaaaggcttccacgaagacagagagaggtttcggcatgtgaactata
ggtttgatagtagaagtggtcccaactggaacagaggatttgaacaagattctcacagag
attttgatgaccgcagaagaccctgggaaagacagagagatagggatgacagagatttta
atttttgcagagaaattaatgggaacaggtttggaagagacagaatgtcaaacaactgga
tcccccctccacatccacgtgtgtttgagtattttgacggggccacttcccaacgcaaag
ctgataatatgccccaggtaaacggtgaaaatacagagacagaaagtcagccaccgactg
cacaggtgcaggacgatccagaactttatgaaaaactgacatcttccgtcgagataaaca
aagagaagagtgacacagaagctgatatagaaagtgaaccagtggtagaaagcacagaaa
ctgaggggacataa
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