Apaloderma vittatum (bar-tailed trogon): 104274027
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Entry
104274027 CDS
T08559
Symbol
LRBA
Name
(RefSeq) LOW QUALITY PROTEIN: lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104274027 (LRBA)
Membrane trafficking [BR:
avit04131
]
Endosome - Lysosome transport
Others
Others
104274027 (LRBA)
Endosome - Golgi transport
104274027 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
104274027 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Laminin_G_3
Neurobeachin
Motif
Other DBs
NCBI-GeneID:
104274027
NCBI-ProteinID:
XP_009867843
LinkDB
All DBs
Position
Unknown
AA seq
1891 aa
AA seq
DB search
MASEDKQGVERTGGDGRGGGKEGNAAEGGSVLQPLNPGVPIRGIKMKFAVLTGLVEVGEV
SNRDIVDTVFNLLVGGQFDLEINFIIQEGEGITCMVDLLDKCDVTCQAEVWSMFTAILKK
SIRNLQACTEVGLVEQVLKRIDKADNMIADLLVDMLGVLASYNLTVRELKLFFSKLQGEK
GRWPPHAGKLLSVLKHMPQKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTWLRMD
PVNNINVDKDKPYLYCFRTNKGLGYSAHFVGSCLIVTSIKSKGKGFQHCVKFDFKPQKWY
MVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNTSDTFDKCFLGSSETADANRVFCGQ
MTSVYLFSEALNAAQIFAIYQLGLGYKGTFKFKAESDLFLAEHHKLLLYDGKLSSAIAFM
YNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVLTHSIQSALHSIGGVQVLFPLF
AQLDYRQYSSDHIDTTVCSTLLAFIMELLKNSIAMQEQMLSCKGFLVIGYSLEKSSKAHV
TRAVLELCLAFSKYLSNLHSGVPLLKQLCDHVLLNPAIWIHIPAQVQLILYTYLSTEFIG
TVNIYGAIRRVGTVLLVMHTLKYYYWVVNPQDRSGITPKGVDGPRPTQKEILSLRAFLLM
FIKQLVMKDYGIKEDELQAILNYLLTIHEDDNLMDVLQLLVALMSEHPNSMIPAFDQRNG
LQVIYKLLASQSEGIRVQALKVMGYFLKHLAPKRKAEVMLGHGLFSLLAERLMLQTSLIT
MTTYNVLFEILTEQICTQVVHKQHPDPDSTVKIQNPQILKVIAILLRNSPQCPETLEIRR
AFLSDMIKLFNNSRENRRSLLQCSVWQEWMLSLCCFNPKTSEEQKITEMVYTIFRILLYH
AIKYEWGGWRVWVDTLSITHSKVTFEMHKESLSQMYKEYQGKGSERSGICSSAPIRTISG
VSKEAETKGKQQRLEVKEDAAAPSGVIDEDRECSTEKEETNTSSCGDQQIHSVSNRKVEL
DAEDRETTQDLKAAPCAELSPEPEGIEPSVSEISTGIAEAIEDSLSKADELVKETGAVTA
ASLAMQTASERETPPSPERLEKSAVEVEDEDDFVDLKEESSMPLPSEEFAGKNKKHSSDE
SEVTKEEKAIAKQPEPVLLKAEDTASVDGQKQELTSSPETVSSAVQEVVTQPDSKEKKLK
EEKVLCSETKTADENANAHMPEPAGASDKRIAKLDVSSVASDTERLELKAHACLETSLPP
RSLPETSRQQDSSGQELAATSDGQRRDSRSTVFRIPEFKWSLMHQRLLTDLLFSIETDIQ
MWRSHSTKTVMDFVNSSDNVVFVHNTIHLISQVMDNMIMACGGILPLLSAATSATHELEN
IEPTQGLSVEASLTFLQRLINLVDVLIFASSLGFTEIESEKNMSSGGILRQCLRLVCAVA
VRNCLECQQHAQMKSVGDTVKNPKPVQGFVGTGKSAAKSPVDIVTGGISPIRDHDRLLQD
MDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPQNERRPPNQSQSFKE
SENENETPATDAENPSAAVGASASTEELESTTSVQRRDSGLGEESASGQTNSSSSVVEAG
PLNVSAGPDAISEVLCTLSLEVNKSQEGRSETGTEDSKPAASVPAAKNVNVKDILRSLVS
TPADGTAVDAALLPPTFLGVLGDGAAEHPVQFHSFDRSVVVPPKKSTISSSAVAVGTPTN
AVSVVSSAESAQAPDLSGESPGKGSSNAKLPSVPTVSSVPEDSASNMSITDRLEHALEKA
APLLREIFVDFAAFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQ
KNAGLAFIELVNEGRXVTVFDSTSALAFKKL
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgaagacaagcaaggtgttgaacgaacaggtggtgatggaagaggaggagga
aaagaaggaaatgctgctgaagggggaagcgtgctgcagcctttgaatccgggagtcccc
atccgaggtatcaagatgaagtttgctgtgctgacaggactggtggaagttggcgaagta
tccaacagagacatagttgatactgtgtttaatctgcttgttgggggccagtttgacttg
gaaattaactttattatccaagaaggagagggcatcacctgcatggtggacttgctggac
aagtgtgatgtcacctgccaggctgaggtgtggagcatgtttacagcaatcctcaagaaa
agtatacgcaatctgcaagcatgcacagaggtgggacttgttgaacaagtgctcaagagg
attgataaagctgacaacatgattgcagatctcttggtggatatgctgggtgtgttggct
agctataacttgaccgttcgagagctaaagttattcttcagcaaacttcaaggagaaaaa
gggagatggccaccacatgctgggaagttattatctgtgttaaaacacatgcctcagaag
tatggacctgatgccttcttcaactttccaggaaaaagtgctgcagctattgccttacct
cctatagccaagtggccgtaccagaatgggtttactttccacacttggctaagaatggat
cctgtaaataatatcaatgttgataaggataagccttacttatattgttttcggacaaac
aaaggacttggttattctgctcactttgttggaagctgcttgattgtaacatccataaaa
tcaaagggaaaaggtttccagcactgtgtaaaatttgatttcaagccacaaaagtggtat
atggttactatagtgcacatctataaccgctggaagaacagtgaacttcgatgttacgtg
aatggggaactggcatcttatggagaaataacgtggtttgtcaacaccagtgatacattt
gacaaatgtttcctgggttcttcagaaacagcagatgccaatcgtgtgttttgtggacag
atgacgtctgtttacctgtttagtgaggctctcaacgctgctcagatctttgccatttat
cagcttggtctgggatataagggaaccttcaaattcaaagcagaaagtgatctcttcctc
gccgaacatcacaaattgttgctatatgatggcaaactatccagtgctattgcttttatg
tacaatccaagggctacagatgcacagctgtgtctagagtcatctcctaaggataaccct
tccatttttgttcattcaccacatgccctcatgctgcaggatgtgaaagcagtcttaaca
cattctatccaaagtgccctgcactccattggaggggtgcaggtactttttcctctcttt
gcacagttggactataggcaatattcatcagaccacattgacacaactgtttgttctact
ttattggctttcatcatggagttgttgaagaactccattgctatgcaagaacagatgctt
tcctgtaagggcttccttgtgataggatatagcctagaaaagtcttccaaagcccacgtt
acccgagctgtgctagagctttgccttgccttttcaaaatacctgagcaacttgcacagt
ggggtgcccttgctgaagcagctgtgtgatcatgtgctccttaatcctgcaatatggatt
catatcccagcacaggttcaactgatcctgtacacttacctgtctactgaattcattggc
actgttaacatatacggtgcaatccgtcgggttgggacggttcttttggtcatgcatacc
ttaaagtattattactgggtagtgaatccacaggatcgcagtggtataactcccaagggt
gtagatgggccacggcctactcagaaagagattttatctctgcgagcattcttgttgatg
tttattaaacagctagtgatgaaggactatggaataaaagaagatgagttgcaggctatc
ctcaattacctgctcactatacatgaggatgacaatctaatggatgtcttgcagttgctt
gttgctctgatgtcagagcatcccaattctatgatccctgcttttgatcagaggaatgga
ttacaggttatctacaagcttttagcatcacaaagtgaaggcatcagagtgcaagctcta
aaagtgatgggatatttcttaaagcatcttgctccaaagagaaaagctgaagtcatgctt
ggacacggattgttctctttgttggctgaaaggctgatgcttcagacaagcttaatcacc
atgaccacatacaatgtcctgtttgagattctgactgaacagatttgcactcaagtggta
cataagcaacatcctgacccagattcaacagtgaagatacaaaatcctcagattttgaag
gttattgcaatcctgcttcgtaattctccacagtgtccggaaactctggagattcggcga
gcctttctctcagatatgattaaactttttaataacagcagagaaaataggaggagtttg
ttgcagtgctctgtctggcaggaatggatgctttccctttgctgttttaatccaaagact
tcggaggaacagaagataacggagatggtgtatactatatttcgaattttgctctaccat
gcaatcaaatatgagtggggtggctggcgtgtttgggtggatacactgtcgatcacacat
tcaaaggtaacttttgaaatgcacaaagaaagtctttctcaaatgtacaaagagtatcaa
gggaaaggaagtgaaaggagtggaatatgttcttcagctccaattagaacaatctctgga
gttagcaaagaagctgaaaccaagggaaagcaacaacgtttggaggtaaaagaagatgct
gctgctccttctggcgttattgatgaggatagggagtgcagtactgaaaaagaagagaca
aatacctcatcatgtggtgaccaacaaattcattcagtgtctaatcgtaaggtggagtta
gatgcggaagacagggagactacgcaggatttaaaagcagcgccttgtgcagaactttct
ccggaaccagaaggaatagagcctagtgtttcagaaatcagtactggaatagctgaagca
attgaagattcactgagcaaagctgatgaacttgtgaaagaaacaggagctgtcactgct
gcttctttagcaatgcaaactgcttcggaaagagaaactcctccaagtccagaaaggctg
gaaaaatcagcagtagaggtggaagatgaagatgattttgttgatttgaaagaggaaagt
agtatgcctttaccttcagaagagtttgctggaaagaacaagaaacatagctctgatgaa
agcgaagtgacaaaggaggaaaaagcaatagcgaagcaacctgaacctgtgcttttgaaa
gctgaagatactgcaagcgtggatgggcaaaaacaagaactgacttcttcaccagaaaca
gtgagttctgcagttcaggaagtagtgactcaacctgattcgaaagagaagaagctgaag
gaagaaaaggttctttgtagtgaaaccaaaacagctgatgaaaatgcaaatgcacatatg
ccagagcctgctggagcctctgacaaaagaattgccaagcttgatgtttctagtgttgca
tcagatacagaaagactggaactgaaagctcatgcatgtctggagacatctttgccgccc
agatccttacccgagacctcaaggcagcaagattcttcaggacaagagctggctgctaca
tcagatgggcagagaagagactctaggtcaactgtgttccgtatccctgagtttaagtgg
tcactgatgcatcagcgcttgctcacagacttactcttttccatagaaacagatatacag
atgtggagaagccattctacaaagactgtgatggactttgtgaatagcagtgacaacgtc
gtatttgtgcacaacacaattcacctcatctctcaagtgatggacaacatgatcatggct
tgtggtggtatattgccattgctttctgctgccacatccgctactcatgaattggagaac
attgagcctactcaaggactttcggtagaagcctctttaacatttctccagagattaatc
aaccttgtggatgtgctaatttttgcaagctctcttggtttcactgaaattgaatctgag
aaaaatatgtcatctggaggaattctgcgacagtgtcttcgtctggtatgtgcagtagct
gtaagaaattgcttggagtgtcagcagcatgcacagatgaagtctgttggagacactgtg
aagaacccaaaaccagtgcagggctttgtaggaacaggaaagtccgcagcaaagagtcca
gtggacattgtgactggtggcatttctccaatacgagaccatgacagacttctgcaggat
atggatattaatcgacttcgagcagtagtgttcagagacatagaggatagtaaacaggct
cagtttttggctttggctgttgtgtattttatttctgtgctcatggtttcgaaatacaga
gatatattggaaccccagaatgaaagacgaccaccaaaccagagccagtcattcaaggaa
tcagagaatgaaaatgaaacccctgctacagatgcagaaaacccatctgctgctgtcggt
gcttcagcctccactgaagaattggaaagtaccacatctgtgcaaagaagggattctggt
cttggggaggaatcagcttcagggcaaacaaacagttccagtagtgttgttgaagcagga
cctcttaatgtcagtgcaggtccagatgcaatcagtgaagtactatgcacactctcacta
gaagtaaataaatcccaggagggcagaagtgagacaggaactgaggacagtaagcctgca
gcttcggtgccagctgcaaaaaatgtcaacgtgaaggacatcctgagaagcttggtaagc
acaccagctgatgggactgcagtggatgctgctcttctgccaccaaccttccttggagtt
cttggcgacggagctgctgagcaccctgtacagttccattcctttgacaggagtgtcgtt
gtaccaccgaagaaatcaaccatttcctcttctgcagttgccgtgggtactcctacaaat
gctgtcagtgtggtttcctctgcagagtcggcccaagccccagatttgtcaggagaatct
cctggaaagggatcatctaatgcaaaattgccatctgtccctacggtttcttcagtgcct
gaggattctgcttcaaatatgagtattacagacaggcttgaacatgctttggaaaaagct
gccccacttctgagagagatttttgtggattttgctgcctttctatctcggactcttttg
ggcagccatgggcaggagttgctgatagaaggtacaagtcttgtgtgcatgaaatctagc
agttcagttgtggaactggtgatgctcctttgctctcaggagtggcagaactctatacaa
aagaatgctggccttgcctttattgagcttgtcaatgaaggaaggtaagtcacagtattt
gatagcacctctgccttagccttcaagaagttgtga
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integrated database retrieval system
