Apaloderma vittatum (bar-tailed trogon): 104274047
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Entry
104274047 CDS
T08559
Symbol
TRERF1
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional-regulating factor 1
KO
K26583
transcriptional-regulating factor 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104274047 (TRERF1)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
104274047 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Myb_DNA-bind_6
Zn_SUZ12
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
104274047
NCBI-ProteinID:
XP_009867864
LinkDB
All DBs
Position
Unknown
AA seq
1169 aa
AA seq
DB search
MGDQQLYKTNHTANSNENLYYQQHQMNSLPSLNHSYGTSVMDAPQASPLSPPFPQDSRDS
IPLPVGSKGLGSMDTSRQTSWTHSGSGNHVPVRNNLSNQSAMWSPLGQGESHDGYQYSYS
QPSESRSQKITSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTESSMADNSGDSALRQLL
SQKPAGEQQPVTSSVQSYQRQRSHPLPQHQNFASTQQKQQMQVMQHQQLYYDYQQHLSQM
QMHSVFQQGQTHVPQMQSQQLLPQQMQHLQQAQYYAQPQQGHQRLSIQEIQQQQQQQPPR
QQQQQRQCPMQIAQYYQTQPVMPQLQQQHQQMQLPLPPYHREPDPKTMHEPHEYSQDVSH
PVQLIQLGAVPQYSYQDPHEQYRHLYPQSLLQQQDQQKQYPSDSRAPSLNSHVGLTPPET
AEDPARQEISSVGNAAPHRTLLPPSGVHLNNKSSQQDSPSTAWPQQAQLSDGRLQPLSPE
QSGQNRETLPERADVKNKLLCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQ
QPLPKEVDSLAPIVMPVSVPVKLLSPEPGTQPSASAAPVKDKPANSVSDDEMPVLVKMTY
SPPCSPKVANPCSSSELSKKPHQSAVKLEENFKPLQDKKKYRHRPEPLFIPPPSFNFSMS
HSGATLYQSQLRSPRVLGDHLLDRTHELPPYTPPPMLSPVRQGSGLFSSVITSSHSTSHT
QLPLTPLTPTPRVLLCRSNSIDGNVIPVTPGPGEQTVEPRINIGPRFQADIPELQNRLLM
EKDVHKATLVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIM
VALEKLLLRKPVRLKCHPLANYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKT
VAQCVEYYYTWKKILRLGRKHRTRLEKKREECLTSGEEEVLEEDEEIEEDRKEEREMQKS
PDPPAISLVGPIDQPALQGLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKP
RCTVPGTKQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKT
HRQHEEQQRQKAQKAAVAAEMAATIARTTGPVGHGLIPLDHMSLVKNVGDIDDDVVQELG
DVMEENEVMDADLLLDDEDADLLQDDAEL
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaaccatactgccaacagcaatgagaacttgtac
taccaacaacaccaaatgaactcccttccatctctaaatcatagctatgggacatctgtt
atggatgctccccaagcgtcccctctctcccccccatttccccaagattcaagagacagc
atacctctgcctgtaggttcaaaaggtcttgggtcaatggatacatctagacaaaccagt
tggacacattctggctcaggaaaccacgttccggtgaggaacaatttgagtaatcaaagc
gcaatgtggagtcccctcgggcagggggagtcccacgacggataccaatattcttactct
caacctagtgaaagtcgatcgcaaaaaattaccagcggtgtcctgcataaattggactcc
tttacacaagtatttgctaaccagaatctgagaattcaagtcaacaacatggctcaggtt
ttgcacaccgagtcttcgatggcggataattctggtgacagcgcgctcaggcagctgctg
tcccagaagccggcgggtgagcaacagcctgtaacttccagtgtgcaaagctaccaaagg
caaagatcccacccactgccacagcaccagaattttgcaagcacgcagcaaaagcaacaa
atgcaagtcatgcagcaccaacagttgtactacgactaccagcaacatttatcgcagatg
cagatgcattctgtgtttcagcaaggacagacacacgttccacaaatgcagtcccagcag
ctcttaccgcagcagatgcagcacttgcagcaggctcaatactatgctcagccccagcag
ggacaccagcggctctcaatacaggagatccagcagcagcagcagcaacagccgcctcgg
caacagcagcagcagcggcagtgtcccatgcaaatagctcagtattaccaaacgcagccc
gtcatgccgcagttacagcaacagcaccaacagatgcagttgccgcttcctccgtatcac
cgggaacctgacccaaagactatgcacgaaccgcacgagtactctcaggatgtgagtcat
cccgtgcagcttatccagttgggagcggtccctcagtattcctaccaagatccccatgaa
cagtacaggcacttgtacccgcagagtttgctgcagcagcaagatcagcagaagcaatac
ccgagcgacagcagagcgccttcgctcaactcccatgttggcctcactccgccagagact
gccgaggatcccgcgcggcaggagatcagttctgtgggtaacgctgcccctcatcgaact
cttttgccaccctcgggagttcatctgaacaacaaaagctctcagcaagactctcccagc
accgcgtggccccagcaggcacaactgtcagatggtagactgcagccgctgtccccagaa
caaagtggccagaacagagaaacacttcctgagagagctgatgtgaagaacaagctactg
tgttcaatatgcttgaaggagtttaagagtttgccggctctaaatggtcacatgaggtca
cacggaggagtaagagcatctcctaacttcaaacaggatgaaggagagaaaccaccacag
cagccgctgcctaaagaggtggatagcctcgcgcccatcgtcatgccagtgtctgtccct
gtaaagcttctgtcacccgagcccggcacgcagccctctgccagcgctgccccagtcaaa
gacaagcctgccaactctgtgtcagatgacgagatgcccgttctcgtgaagatgacttac
tctccaccgtgcagcccaaaagtggccaacccctgctcatcctctgaacttagcaaaaaa
cctcatcaaagtgctgtgaaattggaagaaaacttcaaaccattgcaggacaagaagaag
tatcggcacagacctgaacctctcttcatacctcctccttccttcaacttcagcatgtcc
cactctggtgccaccctgtaccagagtcagcttcgctctccccgtgtcctcggagatcat
ctgctggatcggacgcatgagctccccccctacactccaccaccgatgcttagtccagtt
cggcaagggtctggtctcttcagcagcgttatcacatcatctcatagcacctcacatact
cagctgccgcttactccactgacgcctactccacgggtgctcctgtgtcggtctaatagt
attgatggaaatgtcatcccagtgacgcctgggcctggagaacagactgttgaaccacga
atcaatattgggcccaggttccaggctgatattcctgagctgcagaacagattgttaatg
gagaaagatgtgcacaaggctactttggtttggaaaccgtggccagaactggaaaacaaa
gtcttccaacaaagagtggaagaccttttaaatatgagctgttcgagtgtgttacctggc
ggaggaactaactcagaatatgctttgcactctctctttgaagcaaaaggagatattatg
gttgctcttgagaagctgctgttgagaaagccagtgagattgaagtgtcaccccttggcg
aattaccactacgctggctctgacaaatggacacatcaagaaaggagactgttcaaagag
gccttgtccacttacagcaaagatttcatatttgtacagaaaatggttaagtctaagacg
gttgcacaatgtgtggaatactactatacctggaagaagatcttgcgtttgggacggaag
cacagaacacgtttagaaaagaaaagagaggaatgcctgacaagtggagaagaggaagtg
ttagaggaagatgaggagattgaagaagacagaaaggaagaaagggaaatgcagaagtct
cctgacccaccagctatctctctcgttggacctatagatcagcctgcccttcagggtctt
tcactctcttcgtcctccttcatctgtgaaatgccaaactgtggcgctgtgttcagttcg
cgacaagcgctaaacggccatgctcgcattcatggaggtacgaatcaggtgacaaaacca
cgatgcaccgttccaggcactaaacagaaatctggtacgcagagtggatactgctccatc
aagagttcacctgcccacagcacaacaagcggtgagaccgacccaacaacaatttttcct
tgcaaggagtgtggcaaggtatttttcaaaatcaaaagccgcaatgcccatatgaagact
cacagacaacacgaagaacagcagcggcagaaggctcagaaggctgctgtggcagcagaa
atggcagccacgattgcaagaactactgggccagttgggcatggtttgatccctctggat
cacatgagcttggttaaaaatgtcggcgacatcgatgacgatgttgttcaggagctgggt
gatgtcatggaagagaatgaagtaatggatgctgaccttttactggatgatgaagatgca
gatctactgcaggatgatgctgagttgtaa
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integrated database retrieval system
