Apaloderma vittatum (bar-tailed trogon): 104274073
Help
Entry
104274073 CDS
T08559
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104274073 (TAF1B)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
104274073 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
104274073
NCBI-ProteinID:
XP_009867899
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
RDFNERCAQCSEVNWGLTDGGRFYCRSCHNVTERTREVVNTDFISNARVQTISKGLRKQE
KNDRGCEWYVCEGFQFVLKKQAEALEALGVCPQMKDDVLCNFWRCYLQKSKQAYCNRPAG
ETIRVLSVHDSSTDVDSEPSLLHLLSPSESEGDLQTDCSFASSASKVSASTSVCSGSVDG
SLYLMKNQKEKLRMTMPMTLSFCYMALLWLREPMTLSDLLRFVVEGHIPYFNVFKHFPEK
MKLCGLDLKIFCVESWPVYEEVHNKMLELAAFLDLPRFPDITDSCFLHPDMLCMKYLMEA
NLPDDLHNWTCRVVKKICIGEADFLTLVPGNKSTRKVKYDVLAVALIVVVLKLLFLLDDH
YEWLLSDFAEERNKNNKEGEGGPYFEFKKWYKVIKCSLDVEQKKLDEERAKYLWRCEKPL
FYSAEKKSKVLKRRQMVVNLQNQFGKLSGSVRPAEKPNPSSFQLSWSEENTDGSCFHGHS
LKGILQEKCGVLTAMNPDYWLCTDKLCTEKLCGHLAHYREADFPHSYHFVLRLFSFLLRI
QPSYIHDEVCVVEQKLFNKKLFKKTKYSTGRRK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
agagattttaatgaacgctgtgcccagtgttcagaagtgaactggggtctcactgacgga
ggcagattctattgcagatcttgccacaatgttactgagagaactagagaagttgtgaac
actgattttatttctaatgcaagagtccagacaatctccaaaggtttaagaaagcaggaa
aaaaatgatagaggctgtgaatggtacgtttgtgaaggctttcagtttgtactcaagaaa
caagctgaagctttagaagcgttaggagtatgtccgcaaatgaaggatgatgttttgtgc
aatttttggaggtgttaccttcagaagagcaaacaggcatattgcaacagaccagctggg
gaaactatcagagtattatcagtacacgacagcagtactgatgtggacagtgaaccaagc
cttcttcacttgctgtctccttctgaaagtgagggggacctacagaccgattgcagcttt
gcctcatcagctagtaaagtctcagcaagcacctctgtgtgctctggatcggtagatggt
agcttgtatttaatgaagaaccaaaaggagaaactgaggatgacgatgccaatgaccctt
tcgttttgttacatggcgttactctggttgagagaaccaatgacgttatctgatctctta
aggtttgttgttgaaggtcatattccatattttaatgtttttaagcattttccggagaag
atgaaattatgtggacttgatcttaagatcttttgcgtagagtcctggcctgtgtatgaa
gaagtacacaacaaaatgctcgaacttgcggcttttttagacttgcctcgttttccagat
ataacagacagctgctttctccatccagacatgttgtgcatgaagtacttgatggaagct
aatttgcctgatgacttgcataactggacttgtcgagtggtgaaaaagatctgtattgga
gaagcagatttcctgactcttgtgcctggaaataagtcaacgagaaaagtgaaatatgat
gttcttgctgtggcgcttattgtagttgtgctcaaattactgtttttattagatgatcac
tatgaatggttactttcagattttgctgaagaaagaaataaaaataacaaagaaggtgaa
ggtggtccgtattttgagttcaaaaagtggtacaaggtgataaagtgttccttggatgta
gaacaaaagaagttggatgaagaaagagccaagtatctgtggagatgtgaaaagccactg
ttttattcagctgagaagaaatctaaagttcttaagagaagacaaatggttgtgaacttg
caaaatcaatttggcaagctgtctggttcagtgcgacctgctgaaaagccaaatccttca
agttttcagttaagctggtctgaagaaaacacagatgggagttgttttcatgggcatagc
ctgaagggaattttgcaagaaaaatgcggtgtacttacagccatgaaccctgactattgg
ctgtgcacagataaactctgtactgagaagttgtgtggtcatctggctcactacagagaa
gcagactttccccatagttaccattttgtactaaggttattctcctttcttctgaggata
cagccctcttacattcatgatgaggtgtgtgtggtagaacagaaactttttaataaaaaa
ctcttcaaaaagacaaaatacagcacaggccgaaggaagtaa
DBGET
integrated database retrieval system
