Apaloderma vittatum (bar-tailed trogon): 104274178
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Entry
104274178 CDS
T08559
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104274178 (SMC4)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
104274178 (SMC4)
Condensin II
104274178 (SMC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
THOC7
Motif
Other DBs
NCBI-GeneID:
104274178
NCBI-ProteinID:
XP_009868024
LinkDB
All DBs
Position
Unknown
AA seq
1293 aa
AA seq
DB search
MPSKSTKTSTAAPRKGREPLEESVSDMEVENEGDRQLGQVPPQAVSTEVVDNRSLEEILG
SIPPPPPPAMTNEAGAPRLMITHIVNQNFKSYAGEQILGPFHKRFSCIIGPNGSGKSNVI
DSMLFVFGYRAQKIRSKKLSVLIHNSDEHTDIQSCSVEVHFQKIVDKEGDDYEVIPNSNF
CVSRTAYRDNSSVYHIDGKKKTFKDVGILLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQ
TEHDEGMLEYLEDLIGSARLKDPIQTLCRRVEMLNEQRGEKLNRVKMVEKEKDALEGDKN
KAIEFLCLENKMFKEKNRISQYYIHDLKKRVNDMEMQKEKINEQTKDINEKSSKLADDMK
AKNKALKELEKKLSKITKFIEGNKEKFTQLDLQDIKVRENLKHAKGKAKKLEKQLQKDKE
KIEELKNTSSKSETAISEATSKKELLEKSKEKEEAKLKQVMDSLKEETRGLQEEKESKEK
ELMEFSKAVNEACSKRDVAQSELDIYLSRHNTALSQLNQAKEALTTTSETLKERKAAIKD
IEIKLPQAEKELKEKEKEFEKLVKEESDVTNFVRNLRQKVEEAKSSFAQSRSRGKVLEAL
LQQKKSGNICGLYGRLGDLGAIEGKYDVAISSCCDALDNIVVDTIDTAQRCVNFLKATGI
GVATFIALDKMTLWEKKAQKISTPENTPRLFDLVKVKDEKVRLAFYFALRDTLVANSLED
ATRLAFQRDKRWRVVTLQGQIIEQSGTMTGGGGRVMKGRMGSSVVMDVSEEEVSKMESQL
QKDLKRAAQCGEQKLQLEEAIRKLSQDIREMRNTLEKYRASLQRLSEQEIHLKSQVKELE
ANVIAAAPDKNKQKELEKVLNSYKKDYDCVAEKAGKIETEVKRLHNLIFEINNQKLKAQQ
DKLDKVNKEIDNCASAITKAQVAIKTADRNLKKSEESLLRTEEEIEATEKEIKNLTRELT
TLEEKATEVINECKQAEDALPATQKEHHDLLQEIKAIQDDEHALQKEALNVKLKIEQIDG
HISAHQSKMKYWQKEISKLSLHPIDDNPPEELPVLSQEELEAIEDPDVIRNQIALLEAQC
HEMKPNLSAIAEYKKKEELYLKRVAELDDITNERDNFRQAFEDLRKQRLNEFMAGFNMIT
NKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLAL
VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEIADRLI
GIYKTHNTTKSVATNPKVIAAKGLAELAAPGAV
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccaagcaagagcaccaaaacttcgacagcagcccctcggaaaggcagagagccctta
gaggagtccgtcagtgacatggaagtggaaaacgaaggagacaggcagcttggccaagta
cctccgcaagcagtctcaactgaggtggtagataatcgaagtttagaagagattttgggt
agcatccctcctcccccacctccagcaatgaccaacgaagctggtgctcctcgtctcatg
ataactcatattgtaaaccagaacttcaaatcctatgcaggggagcaaattttgggacct
tttcataagcgtttttcatgtattattgggccaaatggcagtggaaaatccaatgtcatt
gattcaatgctttttgtgtttgggtatcgagcacagaaaatcagatccaaaaaactctct
gtgctgatccataattctgatgaacatacggacatccagagctgttctgtggaagtccac
ttccaaaagatcgttgacaaggaaggagatgattacgaagttattcctaacagcaatttt
tgtgtatctagaactgcctatagagataattcctctgtctaccacatcgatggaaagaaa
aagacattcaaggatgttggtattcttctgcgaagccatgggattgatctggaccataac
aggttcttaattttacagggggaagttgagcaaatcgcgatgatgaaaccgaaaggccag
actgaacatgatgaaggcatgctggagtacttggaagacttaataggatctgcccgactc
aaagatcccatccagactctgtgtcgcagagtggagatgttaaacgaacagaggggagag
aagttaaatagagtcaaaatggtggaaaaagaaaaggatgccttggaaggggacaagaat
aaagccattgagtttctgtgtttggaaaacaaaatgtttaaagaaaagaatcgcatctct
caatactatatccatgacctaaagaaacgagtaaatgacatggaaatgcagaaagaaaaa
attaacgaacaaaccaaagacattaatgagaagagtagcaagcttgcagatgacatgaaa
gccaagaacaaagctttgaaagaacttgaaaagaagctcagtaaaattacaaagttcata
gagggaaataaagaaaaattcacgcagttggatttgcaggatattaaagtaagggaaaac
ctaaaacatgccaaaggcaaggctaaaaaactggagaagcaacttcagaaggacaaagaa
aagatagaagaattgaaaaatacgtcttccaaaagtgaaactgcaatcagcgaagcgaca
tctaagaaagagctgcttgaaaagtcaaaggagaaggaagaagcaaaactcaagcaggtt
atggacagccttaaggaagaaacacgaggacttcaggaagagaaagagagcaaagagaaa
gagctgatggagttcagtaaagcggtgaacgaagcctgttccaagagggacgtggcccag
tcagagctcgacatctatctcagccgtcacaacaccgccctgtcgcagttaaatcaggca
aaggaggctctgacgacgacttcagaaactcttaaggaaaggaaagccgctatcaaagat
atagaaataaagttaccccaggctgaaaaggaattgaaggagaaagagaaggagtttgag
aagctggtaaaagaagagtcggacgttacgaacttcgtacgaaacctccgtcaaaaagta
gaagaagccaaaagctctttcgcacaaagtcgcagccgaggaaaagtgcttgaggctctg
cttcagcagaagaaatcaggcaatatttgtggactgtatggaagactgggagacctggga
gcgatcgaggggaagtacgatgtcgctatttcgtcgtgttgcgacgcgttggacaacatc
gttgtcgatacgatcgacaccgcgcagagatgtgtgaatttcctaaaggcaaccggaatc
ggagtcgccacgtttatagccctggacaaaatgactctatgggaaaaaaaagctcaaaag
atttcaactcctgaaaatactcctcggttatttgatctggtgaaagtaaaagacgagaag
gttcgcctggcgttttacttcgcgctgcgtgacactctggtagccaatagcttggaggac
gctaccagactagcgttccaaagagataaaagatggagggtggtaacgctgcaaggacaa
atcatcgagcagtcaggaaccatgactggtgggggaggcagagtaatgaagggcagaatg
ggttcctccgtcgtcatggatgtttcagaagaagaggtcagtaaaatggaatctcagctg
cagaaggatttgaaaagagcagcacagtgcggggagcagaaattacaacttgaagaagcc
ataagaaaactgagccaagatattcgggaaatgagaaatactttagaaaagtacagagca
agtctccagcgtttatctgaacaagaaattcatctaaaaagccaagttaaggaacttgaa
gccaacgtcatcgctgctgccccagacaaaaacaaacagaaggagttggagaaagtcctt
aatagttataaaaaagattacgactgcgttgccgagaaagccggtaaaatagaaaccgaa
gtgaaacgcttacataacctcatctttgagatcaacaaccagaagcttaaagcccaacaa
gacaaactcgataaggtcaacaaagaaatagataattgcgcttcagccatcaccaaagcc
caagtggccatcaagaccgcggacagaaacctgaaaaaatccgaagagtcccttcttcgc
acggaggaggaaattgaagctactgagaaagaaattaaaaacttaacacgagagctgacc
accctagaagagaaagccaccgaggttataaacgaatgcaagcaggctgaggatgcgttg
ccagcaactcagaaagagcatcacgatttactccaggagattaaagctattcaggacgat
gaacatgcacttcaaaaggaagctcttaatgttaagctgaaaattgaacaaattgacggt
catatttctgcacaccagtcaaagatgaagtactggcaaaaagagatatcaaaactatcg
ctgcaccccatagatgataatccacctgaagaacttccagtgctgagtcaagaagaactt
gaggccatcgaggatccggacgttatcaggaatcagatcgctctgctggaagcccagtgt
cacgaaatgaaacccaacctcagcgccattgcagagtacaagaagaaggaagagctgtat
ttgaaacgcgtggctgagctggatgacattaccaatgagagagacaacttcagacaagct
tttgaagatcttaggaaacaaaggctaaatgaatttatggccggatttaatatgataaca
aataaactgaaggaaaactaccagatgctgactttgggaggagatgccgagttagaactt
gtggacagtctggatcccttctctgaaggaatcatgtttagcgttcggcctcccaagaaa
agttggaagaagatatttaacttatcgggaggagagaagactcttagttccctggctctg
gtttttgctcttcaccattacaagccaacaccactttattttatggacgagattgacgca
gcacttgacttcaaaaacgtctctattgtagcgttttacatatatgagcaaaccaagaac
gcgcagttcatcatcatctccctgcggaacaacatgtttgagattgcagacagattgatc
ggcatttacaagactcacaacaccacgaaaagcgtggccacaaaccccaaagtcatcgca
gccaaaggactggctgaactcgctgccccgggtgctgtatag
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