Apaloderma vittatum (bar-tailed trogon): 104274200
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Entry
104274200 CDS
T08559
Symbol
GRIA1
Name
(RefSeq) glutamate receptor 1 isoform X1
KO
K05197
glutamate receptor 1
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04080
Neuroactive ligand-receptor interaction
avit04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104274200 (GRIA1)
04082 Neuroactive ligand signaling
104274200 (GRIA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
avit04040
]
104274200 (GRIA1)
Ion channels [BR:
avit04040
]
Ligand-gated channels
Glutamate (ionotropic)
104274200 (GRIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF659
DUF2061
Motif
Other DBs
NCBI-GeneID:
104274200
NCBI-ProteinID:
XP_009868055
LinkDB
All DBs
Position
Unknown
AA seq
902 aa
AA seq
DB search
MQHIFAFFCTSFLGAVLGANFPNNIQIGGLFPNQQSQEHAAFRFALSQLTEPPKLLPQID
IVNISDSFEMTYTFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVETSNQ
FVLQLRPELQDALISVIEHYSWQKFVYIYDADRGLSVLQKVLDTAAEKNWQVTAVNILTT
TEEGYRLLFQELGKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANLGFMDIDL
TKFKESGANVTGFQLVNYTDTVPARIMQQWRNNDAREHPRVDWKRPKYTSALTYDGVRVM
AEAFQNLRRQRIDISRRGNAGDCLANPAVPWGQGIDIQRALQQVRFEGLSGNVQFNEKGR
RTNYTLHVIEMKHDGVRKIGYWNEDEKLVPAAIDTQSGNESTSLQNRTYIVTTILEDPYV
MLKKNANQFEGNERYEGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGMVGE
LVYGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIW
MCIVFAYIGVSVVLFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQ
QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIA
YGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLES
TMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQGLLDKLKNKW
WYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEFCYKSRSESKRMK
GFCLIPQQSINEAIRTSTLPRPAAAGGSGENGRVVSHDFPKSMQTIPCMSHSTGMSLGAT
GL
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacatttttgccttcttctgcaccagtttcctaggggcggtgttaggggccaat
ttccccaacaatatccagataggggggttatttcctaatcaacagtcccaggaacatgca
gcttttaggtttgcgttgtctcagctcacggaaccccctaagcttcttccccagatcgac
attgtgaacattagcgacagctttgaaatgacatacaccttctgctcgcagttctccaag
ggtgtctatgccatctttggattttacgagaggaggactgtcaacatgctcacgtctttc
tgcggggctctccatgtctgcttcataacgccaagcttccctgttgaaacgtccaaccag
tttgttcttcagcttcgcccagagctccaggatgccctcatcagtgtcatcgagcactac
agctggcagaagtttgtgtacatctatgatgctgaccgagggttgtcagtcctacagaaa
gtgctggacactgcagccgagaagaactggcaggtgacagctgtcaacatcctgacaaca
acagaagagggctaccgcctgctcttccaggagctggggaaaaagaaggaaaggctggtg
gtcgtggactgtgaatctgagcggctgaacatcatccttagcaagatcatcaagcttgaa
aaaaatgggaatgggtaccactacattctggcaaatttggggttcatggatatcgacctg
accaaattcaaagagagtggagccaatgtaacaggcttccagctggtgaattacacagat
actgttcctgccaggatcatgcagcagtggaggaataatgatgccagggagcatcctcgt
gtggactggaagagaccaaagtacacgtcagccctgacatacgacggggtccgggtgatg
gctgaggcgtttcagaacctgcgaaggcagcggatcgacatctcccgtcgtggcaatgcg
ggggactgccttgccaacccggccgtgccctggggacagggcatcgacatccagagagca
ctgcagcaggtccgttttgaaggattgtctggcaacgttcagtttaacgagaaggggcgg
aggaccaactacaccctccatgtgatcgagatgaaacatgacggggtcagaaagattggt
tattggaatgaagatgagaagttggttccagcagccatagatactcaaagtggcaatgag
tctacaagcctccagaacaggacttacatagtcacaactatcctagaagacccatatgtg
atgctcaagaagaacgccaaccagtttgaaggcaatgagaggtatgaaggctactgtgtg
gagcttgctgctgagatcgcgaagcatgtgggctaccactacaggctggagattgtcaga
gatggaaaatatggagcccgggaccctgacaccaaaacgtggaatggcatggtgggagaa
ctcgtttatgggagggcggatgtggctgtggcacctttaaccatcactctggttcgagaa
gaagttatagacttttccaaaccgttcatgagtttaggtatatctatcatgataaaaaaa
cctcagaagtccaaaccgggagttttttcctttctggatcctttggcttacgagatatgg
atgtgcattgtttttgcctacattggagtgagtgttgtcctcttcctggtgagtcgcttc
agcccttatgagtggcacactgaggaattcgaagaaggacgggaccagccagccaatgac
cagactaatgagtttgggatattcaacagtctctggttctccctaggagctttcatgcag
caaggatgtgatatttctccaaggtctctctctggccgcatagtcggtggcgtctggtgg
ttcttcaccttgatcatcatatcctcctacacagctaacctggctgccttcctcaccgtg
gaaaggatggtttctcccatcgagagtgcagaggacttggccaagcagacagaaatcgcc
tatgggaccctggaagctggctccactaaagaattttttaggcgatccaaaatagcagtg
tttgagaagatgtggacgtacatgaagtcagccgaaccctccgtttttgtgaggacgaca
gaagaggggatgatccgggtgaggaagtcaaaagggaagtatgcctacctcttggagtcc
accatgaatgagtacatcgagcagcggaagccctgcgacaccatgaaggtgggaggtaac
ttggactccaaaggctatggcattgcgacaccaaaggggtctgcactgagaaacccagta
aacctggcagtgttaaaactgaacgagcaggggcttttggacaaattgaaaaacaaatgg
tggtacgacaagggcgagtgcggcagcgggggaggtgattccaaggacaagacgagcgcg
ctgagtctcagcaatgtggcgggggttttctatatcctcatcggtgggctcggactagcc
atgctggttgccttaatcgagttttgttacaagtccagaagtgaatcaaagcggatgaag
ggtttttgtttaatcccacagcaatcaatcaacgaagccatacggacatcaacccttccc
aggccagctgcagcgggaggcagcggagaaaacggacgtgtggtcagccacgatttcccc
aaatccatgcagacgatcccgtgcatgagccacagcactggcatgtccctgggagctacg
ggattataa
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