Apaloderma vittatum (bar-tailed trogon): 104274221
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Entry
104274221 CDS
T08559
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1 isoform p40
KO
K13201
nucleolysin TIA-1/TIAR
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104274221 (TIA1)
03041 Spliceosome [BR:
avit03041
]
104274221 (TIA1)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
104274221 (TIA1)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104274221 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_Nup35
RRM_3
Nup35_RRM_2
DUF1866
Calcipressin
Motif
Other DBs
NCBI-GeneID:
104274221
NCBI-ProteinID:
XP_009868086
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
RYLERFPLLKSGKSQTPASLFRLTPLFNSGEYKSEERLQGRRYVGNLSRDVTEALILQLF
SQIGPCKNCKMIMDTAGNDPYCFVDSDEPGPGPAALAAMNGRKIMGKEVKVNWATTPSSQ
KKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSK
GYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYESNAKQLLYDDVVN
QSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIV
SVNGTTIEGHVVKCYWGKETPDMISPVQQNQIGYPPAYGQWGQWYGNAQLGQYVPNGWQV
PAYGVYGQAWNQQGF
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
gcgttacctggagcggtttcccttgttaaaatcagggaagtcgcagactccagcctctct
gttccgcctcaccccgctcttcaacagcggagaatataagtcggaggagcggttgcaggg
cagacgctacgtggggaacctgtcgagagatgtgaccgaagctctgatcctccagctgtt
cagccagatcggaccgtgcaaaaactgcaaaatgattatggatacagctggaaacgaccc
gtactgttttgtggattctgatgagcccggcccggggcccgcagcgctggctgccatgaa
cggccggaagataatgggtaaggaggtcaaagtgaactgggcgaccaccccaagcagcca
gaagaaagacaccagcagtagtaccgttgtcagcacgcagcgttcgcaagaccatttcca
cgtctttgtcggagacctcagtccggaaatcacaaccgaagacataaaagcagctttcgc
tccgtttggaagaatatcagacgcccgcgtggttaaggacatggcaacggggaaatcgaa
aggatacggcttcgtttccttcttcaacaaatgggacgcagagaacgcgattcagcagat
gggtggccagtggctgggcggaaggcaaatcaggaccaactgggcgaccagaaaacctcc
agctccgaagagcacgtacgaatccaacgccaaacaactgttgtacgacgacgtggtcaa
tcagtccagccccagcaactgcacggtgtactgcggcggcgtcacttcgggactcacaga
acagctcatgcgccagaccttttctcccttcgggcagatcatggaaatccgagtcttccc
agacaaaggctactccttcgtacggtttaattctcacgagagcgccgcccacgccatcgt
ctccgtcaacgggacgaccatcgaagggcacgtcgtgaagtgctactggggcaaggaaac
gccggacatgatcagcccggtccagcagaaccagatcggctacccgccggcctacgggca
gtggggccagtggtacggcaacgcccagctcggccagtacgtgcccaacggttggcaagt
ccccgcttacggcgtctacggccaagcgtggaaccagcagggcttcaa
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