Apaloderma vittatum (bar-tailed trogon): 104274366
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Entry
104274366 CDS
T08559
Symbol
ITGA11
Name
(RefSeq) integrin alpha-11
KO
K06587
integrin alpha 11
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04510
Focal adhesion
avit04512
ECM-receptor interaction
avit04810
Regulation of actin cytoskeleton
avit04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104274366 (ITGA11)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104274366 (ITGA11)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104274366 (ITGA11)
04810 Regulation of actin cytoskeleton
104274366 (ITGA11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
avit04515
]
104274366 (ITGA11)
Cell adhesion molecules [BR:
avit04515
]
Integrins
Integrin alpha subunits
104274366 (ITGA11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_3
FG-GAP_2
LYRIC
Motif
Other DBs
NCBI-GeneID:
104274366
NCBI-ProteinID:
XP_009868278
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
PGFSDTFNIDTKRPKIIAGSKEAYFGYTVQQHDIGGKKWLVVGAPYETNGQQKTGDVYKC
PVTSDTHSNCTKLNLGRVTLSNVSERKDNMRLGLSLATNPKDNSFLACSPLWSHECGSSY
YTTGMCSRVNSNFRFSKTVAPALQRCQTYMDIIIVLDGSNSIYPWVEVQHFLINILKKFY
IGPGQIQVGVVQYGEDVVHEFHLNDYRSVKDVVAAASHIEQRGGTETRTAYGIEFARSEA
FQKGGRKGAKRVMIVITDGESHDSPDLEKVIEDSEKDNVTRYAVAVLGYYNRRGINPEAF
LNEIKFIASDPDDKHFFNVTDEAALKDIVDALGERIFSLEGTNKNEISFGLEMSQTGFSS
HVVEDGILLGAVGAYDWNGAVLKETSSGKVIPLRESYLQEFPEELKNHGAYLGYTVSSVI
STKHERIYVAGAPRFNHTGKVIIFSMHNNQNLTIHQALKGEQIGSYYGSEINSLDVNGDG
VTDVLLVGAPMFFSEGRERGKVYVYTLRENRFVSSGALVDLQSYQNSRFGSCIAAVPDLN
QDSYNDLVVGAPLEDEHQGAIYIFLGFEDTILKKYKQRVAAADLAPGLMYFGCSIHGQLD
LNEDGLVDLAVGSLGNAVLLWSRSVVQVNASIRFEPPKINIFTKDCKRNGKDATCMSAFI
CFTAVFPSPHFQTATVALQYNTTIDERRYTPRAHLDESGERHTQKGLVLLAGQEHCDRLH
FHVLDTADYVKPVMFSIDYELEHPENGPMLDDGWSTSLKVSVPFWNGCNEDEHCVPDLVL
DARSDVPSAMEYCLRRAPPGCSAFALSFDASVFVIESSRRRVAVEAVLENRGENAYSTVL
NISFSRNLQFASLIPKDDTDINIDCMTEDRNPNKKVCNVSYPFFRAKAKVAFRLDFEFSK
SIFLPSLEIYLIANSDSEEKESTKEDNFAHLNFHLKYEADLLFTRASSLDYYEIRSNSSL
ERYDSIGPPFHCTFKLQNLGFFPVEGVTIKLTVPVATRVGNRLLLLTEFVADQENATCNI
WGNTTDYRRPPRXXXXKLLPRQNHSNSDVISIDCNVKLAPNEEMNLHLRGHLWMKSLKAL
KFKSLKLTTNAALQRRFGSPFVFREEDPSRQITFEISKPEESQIPIWIILGSTLGGLLLL
ALLVLALWKLGFFKSGSRRRAAERERSAQGLE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
ccagggttcagtgacaccttcaacattgacaccaagaggcccaaaatcatcgctggctct
aaggaagcgtattttggctacacggtgcagcagcatgacataggaggcaagaaatggctg
gtggtgggagctccctacgaaaccaacggccagcagaagacgggagatgtctacaagtgc
ccggtgaccagcgacacccacagcaactgcaccaaactcaacctaggacgggtaacgctc
tccaacgtctccgagaggaaggacaacatgcgcctcggcctcagcctggccaccaacccc
aaggacaacagctttctggcctgcagccccctctggtcccacgagtgcgggagctcctac
tacaccacgggcatgtgctcccgcgtcaactccaacttcaggttctccaagacggtggct
ccggctctgcagagatgccagacgtacatggacataatcatagttctggacggatcaaac
agcatctatccttgggttgaagttcagcacttcctgatcaacatcttgaaaaaattttat
attggccctggccagatacaagtcggagtcgttcagtacggagaagatgtggtccacgag
tttcatttaaacgactacaggtctgtaaaagatgtggtagcagccgccagtcacatagag
caaagaggaggcacagaaaccaggactgcctatgggatagagtttgctcgctcggaagcg
tttcagaaaggtggccggaaaggggcaaagagagtaatgattgtaatcacagatggagag
tcgcacgacagcccagacctggagaaggtgattgaggacagcgagaaggacaacgtcacc
agatacgcggtggcggtgttgggttattataacagaagaggaatcaaccctgaagccttt
ttgaatgagataaaattcatagcgagcgacccagacgacaaacatttctttaacgtcaca
gatgaagcggcgctcaaagacattgtggacgcgctgggggaaaggatatttagcttggaa
ggaaccaacaagaatgaaatctcctttggcctggaaatgtcccagactggattttcatcg
catgttgtagaagacgggatcttgctgggggcggtgggtgcctacgactggaacggagcc
gtcctgaaggaaaccagcagtgggaaggtcattcccctgcgggaatcttatctccaggag
ttcccagaggagctgaaaaatcacggcgcttatttaggttacaccgtctcctccgtcatt
tccaccaaacacgagcggatttacgtcgcgggagcgcccaggttcaaccacaccgggaaa
gtcataattttcagcatgcacaacaaccaaaacctcaccatccaccaggcgctgaagggc
gagcagatcggctcctactacggcagcgagatcaactccctcgatgtcaacggcgatggc
gtcaccgacgttttgctggtgggagcccccatgttcttcagcgagggcagagagaggggg
aaggtctatgtctacaccctgcgggagaaccgcttcgtttccagcggcgcactcgtcgat
ctgcagagttaccagaactcccgcttcggctcctgcattgccgccgtgcccgacctcaac
caagactcctacaacgaccttgtcgtcggggcacctttggaggacgagcaccagggagca
atatacatcttcctcggcttcgaagacaccatcctgaagaagtacaagcagcgggtagca
gctgcggacctcgcacctggcctgatgtattttggttgcagcatccacggacagctggac
ctcaacgaagacgggctcgtagacttggccgtgggctctctggggaacgccgtgctgctg
tggtctcgcagcgtggtccaggtcaacgccagcatccgcttcgagccccccaaaatcaac
atcttcaccaaggactgcaagcggaacgggaaggatgccacctgcatgtcggccttcatc
tgcttcaccgccgtcttcccctcccctcacttccaaacggccaccgtggccctgcagtac
aacacgaccatcgacgagcgcaggtacacgccgcgggctcacctggatgagagcggggag
cggcacacgcagaaggggctggtgcttctcgccgggcaggagcactgcgacaggctccac
ttccacgtcttggacacagctgactacgtgaagccggtgatgttctccatcgactacgag
ctggagcaccccgagaatggtcccatgttggacgatggctggtccacctcgctcaaggtc
tcggtccctttctggaatgggtgcaatgaggatgagcactgtgtccctgatctggtcctg
gacgccagaagcgatgtgcccagtgccatggagtactgcctgcggagggcaccgccaggc
tgctccgccttcgccctctccttcgacgcctccgtcttcgtcatcgagagcagcaggagg
agggtggctgtggaggcggtgctggagaaccgaggggaaaacgcctacagcaccgtcctc
aacatctccttctccagaaacctccagttcgccagcttgatccccaaggacgacacagac
atcaacatcgactgcatgactgaagacaggaaccccaacaagaaagtctgcaacgtgagc
taccccttcttccgagccaaggccaaggtagctttccgcctggattttgaattcagcaag
tccattttccttccaagcctggagatctacctgatcgccaacagcgacagcgaggagaag
gagagcaccaaggaggacaacttcgcccacctgaatttccacctgaagtacgaagccgac
ctgctcttcaccagggcatcgagcctggactactacgaaatcaggtcgaacagctccctg
gagagatacgacagcatcggccccccctttcattgcaccttcaagctgcagaacctgggc
ttcttccccgtggagggggtgaccatcaagctcaccgtcccagtggccacccgggtgggc
aaccgcctcctgctcctcaccgaattcgtggcggaccaggagaacgcgacctgcaacatc
tggggcaacaccaccgactaccggaggcccccccgcnnnnnnnnnnacaaacttctcccc
cggcagaaccacagcaactcggacgtcatttccatcgactgcaatgtgaaattagccccc
aacgaggagatgaacttgcacttgcggggccatctgtggatgaagtctctgaaagcactg
aagttcaagtcactgaagctcaccacgaacgccgctctccagcgacgcttcgggagcccc
ttcgtcttccgcgaggaagaccccagccgtcagataacgtttgaaatctccaagccggag
gagtcgcagatccccatctggatcatcctggggagcaccttaggaggtctcctgctcctg
gccctccttgtcctcgccctctggaagctcggattttttaaaagcgggagccgcaggcga
gcggcggagcgggagcggagcgcccaggggctggagtga
DBGET
integrated database retrieval system
