Apaloderma vittatum (bar-tailed trogon): 104274655
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Entry
104274655 CDS
T08559
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
104274655 (LRRC4C)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
LRR_1
LRR_14
V-set
Ig_2
LRR_9
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
104274655
NCBI-ProteinID:
XP_009868651
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLXXXXXXXXXXXIR
TIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPS
LRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTA
IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLE
RIHLHHNPWNCNCDILWLSWWIKDKAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAP
VIVEPPADLNVTEGMAAEMKCRASTSLTSVSWITPNGSVMTHGAYRVRIAVLSDGTLNFT
KVTVQDTGLYTCMVSNSVGNTTASATLNVTALDNPGYTYFSTVTVETVEPSQDEAQTTEQ
VGPTPVTSWETTNMTTSLTPQSTRSTEKTFTIPVTDANNGIPGIDEVMKTTKIIIGCFVA
ITLMAAVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPLESHLPMPAIEHEHL
NHYNSYKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgttggctcttcagcttcttgtggtggctggt
ttagtgagggctcaaacttgcccttctgtctgctcctgcagcaaccagttcagtaaagtg
atttgtgtacggaaaaacctgagagacgtgccagacggcatctccaccaacacccggtta
ctcaatctccatgagaaccagatccaaatcattaaagttaatagcttcaagcatctgagg
cacctagaaatcctgcagctcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatcaga
acaattgaaataggggctttcaatggtctggccaatctcaacaccttggaactctttgac
aatcgtcttaccactatcccaaatggggcttttgtatacctgtcaaaactgaaagaactg
tggttgagaaacaaccccattgagagcatcccttcttacgcttttaacagaatcccttct
ctccggaggctggatttgggggaattgaaaaggctttcgtacatctcagaaggtgccttt
gaaggtctgtccaacttgaggtatttgaaccttgccatgtgcaatcttcgagaaattccg
aacctcaccccacttgtaaaactggatgagttagatctttccgggaaccacttgacggcc
atccggccgggttctttccaagggttaatgcatcttcagaagttgtggatgatacagtcc
cagattcaggtgatagaaaggaatgctttcgataaccttcagtcgctcgtggagatcaac
ctggcacacaacaacctaacgctactgcctcacgacctcttcacgccgctccgcctagag
aggatccacttgcaccataacccttggaactgcaactgcgacatcctctggctcagctgg
tggattaaagacaaggcgccctccaacactgcatgctgcgcccgttgccacacacctccc
agtttaaaaggaaggtacatcggtgagctggacctgaattacttcacgtgttacgctccc
gtcatagtggagccaccagcagacctcaacgtcacggaaggcatggccgcggagatgaaa
tgccgggcgtcgacctccctgacctccgtgtcttggattactccaaacggatctgtcatg
acgcacggggcgtacagagttcggattgccgtgctgagcgacggcacgctgaattttaca
aaggtaactgtgcaagacacgggtttgtatacgtgcatggtgagtaactctgttgggaat
accacggcttccgccacgctgaacgtgactgccctggataaccctggttacacgtacttt
tcgaccgtcacggtagagactgtggaaccttctcaggatgaggcacagaccacagagcag
gttggacccaccccggttaccagctgggagaccaccaacatgacaacctcactcactcca
cagagcacaaggtcaacggaaaaaacgttcaccattcctgtgacggacgcaaacaatggg
atcccgggaatagatgaggttatgaagaccaccaaaatcataattggttgttttgtggcg
atcactctcatggctgccgtgatgctggtaattttctacaaaatgaggaaacagcatcac
cggcagaaccatcatgctccaacgcggactgtagagatcattaatgtggatgatgagctt
acaggtgacacccccttagagagtcacttgcccatgccagcaatagagcatgagcaccta
aatcactataactcttataagtctcctttcaaccacacaacaacagttaacacaataaat
tcaatacacagttcagtgcatgaaccgttattgatccgaatgaactcgaaagacaatgta
caagagactcagatctaa
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