Apaloderma vittatum (bar-tailed trogon): 104274911
Help
Entry
104274911 CDS
T08559
Symbol
VPRBP
Name
(RefSeq) protein VPRBP
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
avit01001
]
104274911 (VPRBP)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104274911 (VPRBP)
Enzymes [BR:
avit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104274911 (VPRBP)
Protein kinases [BR:
avit01001
]
Serine/threonine kinases: Other
Other
104274911 (VPRBP)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
104274911 (VPRBP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_2nd
EIF3I
WDR55
ANAPC4_WD40
LisH
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
104274911
NCBI-ProteinID:
XP_009868986
LinkDB
All DBs
Position
Unknown
AA seq
1505 aa
AA seq
DB search
MTSGSGHVDSKAELTALLEQWEKDHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYATGLLGGAMENQDIAANYRDENSQLVALVLRRLR
ELQVTEMTTKQENKRPSPRKVPSDPLLPLDEEAVDMDYGEMAVDGEQEEVPGDMEISFHL
DSSHKTSSRVNSATKLDDGGLRKSKSGKQHERDGFRKAKQKLGFSTSEPERMFVELSNSS
WSEMSPWVIGTNYTLYPLTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMYYIDLK
RTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYLSYN
QDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRHDGL
RRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRRYFEAHLAIKLEQVKQSL
QRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLMLQL
ISIACNWKTYYARNDTVRYALDVLAILTVVPKIQLQLAEPVDVLDEAGSTVSTVGISIIL
GVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQAPKSSEHTLA
KMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPLFSS
CQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRI
TFPEKELLLLIRNHLISKGLGETASVLTKEADLPMTAASHSSAFTPVVAAASPVTLPRTP
RIANGISARLSSHNSVGSTAASVHAQARPPASQGPLALPGPSYASNSPLIGRISFVRERP
SPCNSRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCKNPVA
TCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTRRAAFPKYGGVDGGCFDRHLIFSRFRPIS
VFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPS
RDGSLLLTSATWSQPLSALWGMKSVFDMKHSFPDDHYVEFSKHSQDRVIGTKGDIAHIYD
IQTGNKLLTLFNPDLANNYKKNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNMTISG
VFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRVVFNYTGTVMYGAMLQADDEDDLLEE
RMRSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDSKDCYLAVIENQGSMDAMNMDTVC
RLYEVGRQRLAEDEEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEEDENN
ENAGEDGENDFSPSDDEELANLLEEGDEGEDEDSDADEEVELILGDTDSSDNSDLEDDII
LSLNE
NT seq
4518 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaggatctgggcatgtggactccaaggctgagctcactgctttgcttgagcaa
tgggaaaaagaccatggcagcgggcaagacatggtccctatccttaccagaatgtctgag
ctgattgagaaagagactgaagagtaccgcaaaggggatccagacccttttgatgaccga
catccaggtcgagcagacccggagtgcatgcttggccacttactgaggatacttttcaag
aacgatgatttcatgaacgcgctagtgaacgcttacgtgatgacaagcagggaacctccg
ttaaacactgctgcctgtcgacttcttctggatatcatgccgggactggaaacagctgtt
gtctttcaggaaaaggaaggcatagttgaaaatctctttaagtgggcgcgagaggctgat
cagccactaaggacgtatgcaacagggctcttaggaggagctatggaaaaccaagatatt
gctgcaaattacagggacgagaactcacaattggtggctttggtgcttcgacggctacga
gagttacaggttactgaaatgactacaaagcaagaaaacaagcgtcccagtccacggaaa
gtgccatcagatcctctgctgcctctggatgaagaggctgtggatatggattatggggag
atggcagtagatggggagcaagaggaagttcctggtgacatggagatctcctttcatctt
gattcaagtcacaagaccagtagcagagtgaattccgctacaaagctagatgatggggga
ctgagaaaaagcaaatcagggaaacagcatgaaagagacggcttccggaaggccaagcaa
aagctgggcttctccacttcagaaccagagcggatgtttgttgaactgtccaacagcagc
tggtcagaaatgtctccatgggtgattggcactaattacacactttaccccttgactccc
gccatagagcagaggctaattcttcagtacctgactcctttaggggagtaccaagagcta
ctaccgatctttatgcaactgggatcaagggagctgatgatgtactacattgacttgaag
cgaaccaatgatgtgctgctcacttttgaagcccttaagcatttggcatcgctgctgctg
cacaacaagtttgcgacggagtttgttgctcatggaggagtgcaaaagttgctggagatt
cctcgtccttctatggcagcaacaggggtctccatgtgcttgtattatttgtcttacaat
caagatgccatggagagggtgtgcatgcacccccataacgtgctttcagatgtggtaaac
tacaccttatggctaatggagtgctctcacgcctcgggctgctgccatgctaccatgttc
ttctccatttgcttctccttccgtgctgtcctggagctctttgacaggcatgatggcctt
cgacgcctggttaacctgataagcactcttgagatcttaaacctggaagaccaaggagcc
cttttaagtgatgatgagatatttgccagtcgccagactgggaaacacacctgcatggcc
ttgcgtaggtactttgaggctcaccttgctatcaaacttgaacaggtgaagcagtcactc
cagcgcacagaaggtggcattctggtccatccacagcccccctacaaggcctgttcatat
actcatgagcagattgtggagatgatggagttcctgattgagtatggtccagcacagctc
tactgggagccagcagaggtttttctcaaattgtcttgtgtccagctcatgctccagctc
atttcaatagcgtgcaactggaagacatactatgcaaggaatgacacagtacgatatgct
ttggatgtactagccatcctgactgtggttcctaaaatccagttgcagctggcagaacct
gtggatgtgttagatgaagctggatctactgtttccactgtgggtattagtatcatcctt
ggagttgctgagggtgaatttttcatccatgatgctgagattcagaaatcagcccttcag
atcatcatcaactgtgtatgtggcccagataatcggatctccagtattggcaaattcatc
tctggaactcctcggcgaaagcttcctcaggcccccaagagcagtgagcacacgttagcg
aagatgtggaatgtggtgcagtccaacaatggcatcaaagtgctgctgtccttgctgtct
ataaagatgccaatcacggacgcagatcagatccgagcgctagcctgcaaagccttggtg
gggctctcgcgcagcagtactgtccggcagattatcagcaagctccccctcttcagcagc
tgtcagattcagcagctgatgaaagagccggtgcttcaggacaagcgcagcgagcacgtg
aagttttgcaaatatgctgctgagctgatagagcgtgtctcggggaagccgttgctgatt
ggcacagatgtgtctttggctcggttgcagaaagcggatgtggtggcccagtcaaggata
acatttcctgagaaggagctgctgctcttgattcggaaccatctcatctctaagggccta
ggagaaacggcatctgtccttacgaaagaggctgacctacccatgactgcagcatctcat
tcatctgccttcacccctgttgtggctgctgcctcccctgtgaccctgcctcgcactcct
cgcatagctaacggcatctcagcccgtttgagtagccacaattctgtaggttccactgcc
gcctctgtccatgctcaggcaaggccacctgcatcccaaggtccacttgcccttccgggg
ccttcttatgccagcaactcgcctctgattggcaggattagctttgtcagggagaggcca
tctccctgcaacagcagaaaaatcagagtattgcgacaaaaatcggaccatggcgcctac
agccagagcccagctatcaaaaagcagctggacagacaccttccttccccacccacactg
gacagtataatcacagagtaccttagggagcagcacgcccgctgcaagaaccccgttgcc
acctgcccccctttctctctctttactccccatcagtgtcctgagccaaaacagaggcgc
caagcgccaactaactttacctcacggctgacccgcagggcagcgtttccgaagtacgga
ggggtggatggtggctgctttgatagacatcttatatttagcaggttccgtccaatttct
gtgttcagggaagcaaatgaggatgagagtggctttacttgttgtgcgttttctgcaaga
gaacgattcttaatgctgggtacttgcacggggcagttgaaactctataatgtgttcagt
ggacaggaagaggccagttacaattgccataactctgccatcacgcacctagagccatcc
agggatggatctttattgctgacatctgctacatggagccaacctctgtctgcgttgtgg
ggaatgaagtctgtctttgatatgaagcattccttccctgatgaccactatgtggagttc
agcaagcactctcaggatagggtcattggcacaaaaggagacattgcccatatctatgat
attcagactggcaacaagctattgactctgtttaacccagatcttgccaacaactacaag
aagaactgtgccacctttaaccccactgatgaccttgtcctaaatgatggtgtcctctgg
gatgtcagatcggcacaagccatccacaagtttgacaaattcaacatgaccatcagtggt
gttttccatcccaatgggctggaggtcatagtcaacacagaaatttgggacctccgaacc
ttccatttgttacacacagtacctgcactggatcagtgtcgtgtggtcttcaactatact
ggcacagttatgtatggagctatgttgcaggcagatgatgaagatgaccttctggaggag
agaatgagaagtccctttggctcttctttcaggacatttaatgcaaccgattataaacct
atagctaccatagatgtaaagcggaatatctttgacttgtgcacagacagcaaggactgc
tatctggccgtcattgagaatcaagggagcatggatgccatgaacatggatacagtttgc
agactgtatgaagtaggcaggcagcgtttggcagaagatgaagaggacgaagaagaagac
caggaggaagaagagcaagaagaagaagatgatgatgaagatgatgatgatacagatgac
cttgatgaactagatacagaccagctgctggaggctgagctggaggaggatgagaacaat
gagaatgctggtgaggatggagaaaatgacttttctccctctgatgatgaggagcttgcc
aacctcctagaagagggagatgagggtgaagatgaagattctgatgctgacgaggaagtg
gagctgattcttggagacaccgacagctcagataactctgacttggaggacgacataatc
ctgtctctgaacgagtga
DBGET
integrated database retrieval system
