Apaloderma vittatum (bar-tailed trogon): 104275060
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Entry
104275060 CDS
T08559
Symbol
HDAC4
Name
(RefSeq) histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
104275060 (HDAC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
avit03036
]
104275060 (HDAC4)
Enzymes [BR:
avit01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104275060 (HDAC4)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
104275060 (HDAC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
104275060
NCBI-ProteinID:
XP_009869205
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
PDGLSGRDQPVELLNPPRVNHMPSSVDVTTALPLQVAPTSVPMDLRLDHQFSMPVTEPTL
REQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAMKHQQE
LLEHQRKLEQHRQEQELEKQHREQKLQQLKNKEKGXSGAVASTEVKMKLQEFVLNKKKAL
AHRNLNHCISSDPRFWYGKTQHSSLDQSSPPQSGVSGTYNHPVLGMYDSKDDFPLRKTAS
EPNLKLRSRLKQKVAERRSSPLLRRKDGPVVTALKKRPLDVTGTSDSACNSAPGSGPSSP
NNSSNNISTENGIAGSVTSIQAETSLAHRLVNREGSVTQLPLYTSPSLPNITLGLPATGP
SSGGSAQQDAERLTIPTLQQRISLFPGTHLTPYLSTTTLERDGGTAHNPLLQHMVLLEQP
TAQTPLVTDWYLSGLPLHAQSLVGGERVSPSIHKLRQHRPLGRTQSAPLPQNAQALQQLV
IQQQHQQFLEKHKQQFQQQQLHINKIISKPNEPTRQHESHPEETEEELREHQALLEEPYS
DRVTSQKEAPGLANMVQVKQEPIESDEEEAEPQQELESGQRQAEQELLFRQQALLLEQQR
IHQLRNYQASLEAAGMPVSFGGHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTL
MLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTL
LYGTNPLNRQKLDSKKLLGSLTSMFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVIEL
VFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAIAAKLLQQRLNVSKILIVDWDV
HHGNGTQQAFYNDPNVLYISLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPP
MGDTEYLTAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLM
GLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEKVFQQRANANAVHSMEKVI
EIHSKYWHSLQRYASTVGYSLVEAQKCENEEAETVTAMASLSVGVKPAEKRPDDEPMEEE
PPL
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
ccagatgggctttctggcagagaccagccagtagagctgttgaatccacctagagtgaac
cacatgcctagctctgttgatgtgaccacagcactgcccttgcaagttgcaccgacttca
gtcccgatggatctgcgcttggaccaccagttttccatgccggtgacggagccgacgctg
cgggaacagcagctccagcaggagctcctggcgctcaagcagaagcagcagatccagaga
cagatcctcatcgccgagttccagcggcagcacgagcagctctcccggcagcacgaagcc
cagctgcatgagcacatcaaacagcagcaggagatgctggcgatgaagcatcagcaggag
ctgttggagcaccagaggaagctggagcagcaccgacaggagcaggagctggagaagcag
caccgggagcagaaacttcagcagctaaaaaacaaagagaaaggganttcaggtgcagtg
gcaagcacggaagtaaagatgaaattacaagaatttgtcttaaataagaagaaggcgttg
gcgcaccggaatctgaaccactgcatatccagtgatcctcgcttctggtatgggaagaca
cagcacagctccctggaccagagctccccaccccaaagtggtgtatccggcacctacaat
caccctgtactgggcatgtacgattccaaagatgacttcccgctcagaaaaacagcgtct
gaacccaatctgaagttgcgatccaggctaaagcaaaaagttgccgagagacggagcagc
cccctcttgcgcagaaaagatggtccagtggttactgctcttaagaagcgcccactggat
gtcacaggtacatcagactctgcatgcaacagtgctcctggatctggtcccagttctcca
aacaacagctccaataacataagcaccgagaacggaattgcaggatcagtcacgagtatc
caagcagagaccagcctggctcacagacttgtgaatcgtgaaggctcggtaacacagctt
ccgctctacacatctccttctttgcccaacatcacgctaggactgcctgcaactggccct
tccagcggaggatcagcacagcaggatgcagagagacttactatcccaaccttacagcag
cggatctctttatttcctggcacccacctcactccctacttgagcactacaacgttggaa
agagatgggggaactgcacataaccctcttctgcaacacatggtcttactggaacagcca
actgcacaaactcccttagtcacagactggtatctttcaggactgcctctccatgcacag
tctctggttggtggagaacgggtctccccttcaatacacaaactccggcagcatcgcccg
ctggggcgcacgcagtctgctccccttccccagaacgcccaggccctccagcagttagtg
atccagcagcagcaccagcagttcttggagaaacacaaacagcaattccagcaacagcaa
ctgcacatcaacaagattatatcaaaacccaacgaacccactcgccagcatgaaagccac
cctgaggagacagaagaagagttacgggaacatcaggcccttttggaggagccatatagc
gacagagtcacaagccaaaaggaggccccagggttggccaacatggtgcaagtgaagcaa
gaacccattgagagtgatgaggaggaagcagagccacagcaggagctggagtctgggcag
aggcaggctgagcaggagctgcttttccgtcagcaagcccttctgctggagcagcaacgt
attcaccagctgagaaactaccaggcgtcgctggaagcagctggcatgcccgtctctttc
ggagggcatcggcctctgtcccgtgcacagtcctcgcccgcctcagccaccttcccaatg
tctgtacaagagccacccactaagccaaggttcacaacaggccttgtgtatgacaccttg
atgctgaaacaccagtgtacctgtggaaacacaaacagccacccagagcacgcggggagg
atccagagcatctggtcccggctccaggagacaggtctccgtggcaagtgtgagtgcatt
cgtggaaggaaagcaactctagaagagctgcagacggttcactcagaagcccacacgctg
ctgtatggcacaaaccctctgaacagacagaaactggacagcaagaaacttctaggttct
ctaacgtcaatgtttgtcaggcttccttgcggtggtgtcggggtcgacagtgacacaatt
tggaatgaagttcactcatccggtgccgctcgcctggccgtgggctgtgtcattgagctc
gttttcaaagtggccacaggagagctgaagaatggatttgctgttgttcggcctccaggt
caccacgcagaagagagcacacccatgggtttctgctattttaactccgtggcaattgca
gccaagctgctccagcaaaggctgaatgtcagcaaaatccttatagtggactgggatgtt
caccacgggaatggtactcagcaagctttctacaacgatcctaacgttctttatatttca
ctacatcgctatgatgatgggaacttctttccaggcagtggtgctcccgacgaggttggc
acaggagcaggagttggcttcaatgttaacatggcctttactggtggcctcgatccccca
atgggagacacagaatacttaactgctttcagaacggtagtaatgcccattgccaatgaa
tttgccccagatgttgtgctggtgtcatctggtttcgatgcggtggaaggccatcccaca
cctcttggaggatataatctatcagcaaaatgcttcgggtacctgacgaagcagctgatg
ggcctggccgggggtcgcgtcgtcctggctctcgaagggggccacgacctgacggccatc
tgcgatgcctcggaagcgtgcgtttctgctttgctgggaaacgagcttgaccctcttcca
gaaaaggttttccagcagagagcaaatgctaatgcggtgcattcaatggagaaagtaatc
gagatacacagcaaatattggcattcactccagcgttacgcctccacggtggggtactcc
ctggtcgaggctcagaagtgtgagaatgaggaggcggagacggtaacagccatggcatct
ctgtcagtgggcgtgaagccagctgagaagagacccgatgatgaacccatggaagaggaa
cctcccctgtag
DBGET
integrated database retrieval system
