Apaloderma vittatum (bar-tailed trogon): 104275256
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Entry
104275256 CDS
T08559
Symbol
POP1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104275256 (POP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
avit03009
]
104275256 (POP1)
03016 Transfer RNA biogenesis [BR:
avit03016
]
104275256 (POP1)
03029 Mitochondrial biogenesis [BR:
avit03029
]
104275256 (POP1)
Enzymes [BR:
avit01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
104275256 (POP1)
Ribosome biogenesis [BR:
avit03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
104275256 (POP1)
Transfer RNA biogenesis [BR:
avit03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
104275256 (POP1)
Mitochondrial biogenesis [BR:
avit03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
104275256 (POP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
104275256
NCBI-ProteinID:
XP_009869473
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
DVRSEQQYQQQKFSNQSSGPSYRKDQYFPKGQNRGERGRGRGGWQGGRQSVSDEMPKYIT
VSTFAQARAAEINAMLKAVSQKSSNSLVFQTLPRHMRRRAMSHNIKRLPRRLQEIAKKEA
EKAVHQKKEQSKTKCRKARRRHINLVAEFNRRQRKSIWLETHIWHAKRFHMVKKWGYCLG
NSPTEKCYRACYRAMTKHCLLQDLSYYCCLELTGKENELLKQLARICSIDTGLTFEEACC
LSGRFEGSLNLYRADRYPEDTLGPVTFIWKPRDGSENRQLWIWMHPALKQDILRELKAIF
QCSEAEEVCIPEPGTASVQEEKKMDVVLSLGKKRKKEDNEGEKAVPVKKIIGDGTRDPLQ
PYSWISHATGIVISDRTMEILRYRLIGPLSHSVLTETLKAASLQTEMADSERELNNWWVE
NCKDSERVSLHQRQSAIFEMLEGISSPSVMPPGTILGLTVGDPRVNLPKKKTKATPDFEK
FQDNDKVRQLYLEGVPVDCAHSFIWDKDICKNVTENKISEQDLNRMRAQLLVPGSHLDLG
PCESKIPILLVQQPGKMAGEDRPGWGSGWDIYLPKGWGMAFWIPFIYQGVRVGGLQEALK
HSEYQRTPHTPNDFPDCQAGMQFAKELQTSLLEKFKRRPPAKRANYVKLGTLSPFICPWG
QLTKNWEARVKASGEFVHPSSPHPDCCTTQGHTFSDPKVEMVKEASSETGEVEETMEVTS
SEGALKTEDVTGTQDVGERDETMTASDFIVLRSERLLMQLSAWCYPTAGKDRRLRLISRL
GQKEMTEDVFLPMLTSYPRALVWVNLSLLRKGNPELHAMICIPTDDDLLHLSKDKLFCGP
QEPRHRDIFKDKIQKQKEEKKKKKVNTKALEGDPAGGPDEETTEEHEDLILGLWSDALPD
VTSHCSRTLLGYVTRGDFSLAAGCGEALGFVSLTGLLHMLHNQPADKKGLVLLRTPASLQ
YRFARLNIEV
NT seq
2915 nt
NT seq
+upstream
nt +downstream
nt
gagatgttcgttctgagcagcagtatcagcagcagaaattttcgaatcagtcatctgggc
cttcctacaggaaagaccagtattttccaaaagggcaaaatagaggagaaagaggcagag
gaagaggaggatggcaaggaggacgccagagtgtttctgacgaaatgccaaaatacataa
cagtatctacctttgcccaagctcgtgccgctgagatcaatgccatgttgaaagcagttt
cgcagaagtcttcaaactctctagttttccagactctacctcgacacatgcgaaggcgag
ccatgagtcacaatattaaacgcctgcccaggcgcctccaggagattgccaagaaagagg
cggagaaagctgtacatcagaaaaaagaacagtccaagactaaatgccgcaaagctagaa
gacgccacataaatctggtagcagagtttaatcgcagacaaagaaagagtatttggctgg
aaacgcatatttggcatgcaaagagatttcatatggtaaagaaatggggatactgtttag
gaaatagccccacggagaagtgctacagggcttgttaccgagccatgacaaaacactgcc
ttcttcaggacttatcatattattgttgcctggagttgactggtaaagagaacgagcttc
tgaagcagcttgctcgaatatgtagcattgacacaggattaacatttgaagaagcttgct
gtctgtctggaagatttgagggttccctgaatctgtaccgagcagatcgctatcctgagg
acacacttggtcctgttacatttatttggaaacccagggatgggtctgaaaacaggcagt
tgtggatctggatgcatccagctctcaaacaggacatactgagagagttaaaagcaattt
ttcagtgttcagaagctgaagaagtctgtattcctgagcctggtacagcatcagttcaag
aggagaaaaaaatggatgttgttctgagccttggcaagaaaagaaagaaggaggataacg
aaggagaaaaagctgtgccagtgaaaaaaataattggtgatggcactagagatcccttgc
agccctactcttggatctcacacgctactggcattgtcatcagtgatagaaccatggaga
ttctcagataccgactgattggcccattatcacactcggtccttacagagaccttgaaag
ctgcttctctccaaacagagatggcggattcagagagagaactgaataactggtgggtag
aaaactgcaaggactctgaaagagtatctcttcatcaacgtcagagtgctatctttgaga
tgttagaagggataagttcaccatcagtaatgccaccaggtacaatactgggcctcactg
ttggagatcctcgagtcaatttgccaaaaaagaagacaaaagccacgccagactttgaaa
aattccaagataatgataaagttaggcagctgtacctggagggtgtacctgtagactgtg
cgcacagctttatctgggacaaggacatctgtaagaacgtcactgaaaataaaatctcag
agcaggatttaaaccgtatgagagctcagttactggtacctggatcacaccttgatttgg
gtccttgtgaatctaagattcccatcctattggtgcagcagccagggaaaatggctggag
aagatcgcccaggatggggaagtggctgggatatctatctcccaaagggctggggcatgg
ctttctggattccttttatatatcaaggtgtacgagtcggtggcttgcaagaggctttaa
agcattctgagtatcagagaacacctcacactccaaatgatttcccggactgccaggcgg
gaatgcagtttgccaaagagctgcaaacaagtcttcttgaaaaattcaaacggcgtccac
cagcaaaaagggcaaattatgtcaagctgggcactctgtcccctttcatctgtccttggg
ggcagctgacaaagaactgggaagcaagagtgaaagcttcaggagagtttgtacatcctt
cttccccacaccctgactgctgcacaactcaggggcatacctttagtgaccccaaagtgg
aaatggtgaaagaagcttcctctgagactggggaggtagaggagaccatggaagtaacaa
gctctgaaggtgctctgaagacagaggatgttacaggcacccaagatgttggtgagagag
atgaaactatgacagcgagtgactttattgttctcaggagcgagagactgctaatgcagt
tatcagcctggtgctaccccactgctggaaaagataggcgactccgccttatttctcgac
tggggcagaaggaaatgactgaagacgtctttttgccgatgttgacaagctatccgcggg
ctctcgtgtgggtcaacctgtctctcctgaggaaggggaaccctgaattacatgccatga
tttgcatcccaacagacgacgacttgctgcatctaagcaaagacaaactcttctgtggtc
ctcaagaacccagacatcgtgacatatttaaggacaagatacagaaacagaaagaggaga
agaagaagaagaaagttaacacaaaagctctagaaggtgaccctgcaggtggtccagatg
aagaaacaactgaggagcatgaagacctcattcttggtctttggtcagatgctctcccag
atgttacttcccactgctccagaactctcttgggatatgtcactcgaggggatttttcat
tggctgcgggctgtggggaagcactggggtttgttagcttgacagggttacttcatatgt
tacacaaccagccagcagataaaaaagggctcgttttgttaagaactccagcatctttac
agtacaggtttgcaagacttaatattgaggtttaa
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