Apaloderma vittatum (bar-tailed trogon): 104275317
Help
Entry
104275317 CDS
T08559
Symbol
ZSWIM8
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104275317 (ZSWIM8)
Ubiquitin system [BR:
avit04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
104275317 (ZSWIM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
104275317
NCBI-ProteinID:
XP_009869542
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRRQSAGPNSPTVKMKD
GLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGS
ADEFQRGEQLFRVRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTDQCLNYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMCDEMVVLWRLA
VLDPTISPQRRRDLCSQLRQWQLKVIDNVKRGQHKKSLEKLFQGFKPAVEACYFNWEDAY
PIPGITYSSTDKKNSFCWVKAIQQRSCRLQCAETACEAGRTHGQEPGGPCLQPGDRLRPS
PQEPAVRPKELTGKRKVVSETPQRVLRRLSAEGDKAVYKTAVGKAKLPVSKGLTSKHSGK
RRMSSEDSSLEPDLAEMSLDDSSLALGAEASNTFSFAESPLSRSYRDAFEEDGGVYFSEG
PEPSVRSSSMAKKSPKDPVGEMGSDDDDLPSADENSGGVSLKPEEVGENGAVGGGDDGEE
EDDYQVYYLNPQEVAKEDDDKADGGNEEEQDMFAGIKPLEQENRMEILFACAEALYAHGY
SNEARRLTVELARDLLANPPDLKVEQPPTKGKKNKVSTSKQTWMATNTLSKAAFLLPVFF
XYQNLAFQIGMFALELQRPPASTKALEVKLAYQESEIGGLLKRIPLGSREMNTIRGRAEE
LREGTLCDYRPVLPLMLASFIFDVLCAPVVSHTGSRPASRICNSEMPGDEELGFEAAVAA
LGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKILDKLLDRESQTHKPQT
LSSFYSSSKPTVPNQKSPSKHAAQSTAAIQQLPGTSVTQQAAVSTAVQSSPENFVEKSAQ
ESSQRSPCEPAAEATVLKQEGKVPSRLALGNRGGYNGRCWGSPVRQKKKHTGMASIDSSA
PETTSDSSPTLSRRPLRGGWATTSWGRGQDSDSISSSSSDSLGSSSSSGSRRASGGARAK
TVEVGRYKGRRLESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGNSSTSIFTHPSSSGGH
QGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQAMEIGSAALNILVECW
DGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPNEIQRALVQCKEQDNL
MLEKACMAVEEAAKGGGVYPEVLFEVAHQWYWLYEQTVGGTPAQREGATGCSASGARAAS
EAARGLTDNRVTSEPTTVTVAAAVTAAATVMPVISVGSTMYQQHTMAGPAMAHTHTQGLH
PYTTLQTHIPCNPQYIGHTIQHMPRPAVFPVPGSAYPQGVHPAFIGAQYPYSVTPPSLAT
TAVSFPGVPVPSMTQIAVHPYHSETGLSLSSNVAIGSVHAGSTFPAIQGASLTTLSSQPN
SLVTGGFPAEDEQHSQPVSPQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRSPPYTE
DVKWLLGLAAKLGVNYVHQFCVGAAKGVLSPFVLQEIIMEALQRLNPAHVHNHLRTPAFH
QLVQRCQQAYIQYIHHRLIHLTPADYDDFVNAIRSARSAFCLTPMGMMQFNDILQNLKRS
KQTKELWQRVSLEMTTFSP
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atggaactcatgttcgcagagtgggaggacggggagaggttttcatttgaagactccgat
cgctttgaagaagactctctttgttctttcatttctgaggcagagagcctttgccagaac
tggagaggatggaggaggcaatcagctggacccaattctcccactgtcaaaatgaaagat
gggctggtgatcccattggtggaactgtctgcaaaacaggttgcgtttcacattccattc
gaggtggtggagaaagtttatccaccagtgcctgagcagctgcagcttcgaattgccttc
tggagtttcccagaaaatgaggaagatatcagattgtactcatgtttggcaaatggcagt
gcagatgagttccagcgaggggagcagctcttccgggtgagggctgtcaaagaccctctc
cagataggtttccacctgagtgccactgtggtacccccacagatggtgccgcccaaaggt
gcgtacaacgtggcggtgatgtttgaccggtgccggatcacgtcgtgcagctgtacctgc
ggagctggggccaagtggtgtgcccacgtcgtggcgctctgcctcttccggatacacaat
gcatctgcggtatgcttgcgagcacctgtttctgagtccttgtctcggttacaaagagac
caattgcaaaaattcgctcagtacctaatcagtgaacttccacaacagattcttccaaca
gctcagcgcttgctggatgagctgttatcttctcagtctactgccatcaacacagtctgt
ggagccccagatcccactgctggaccctctgcatcagatcaaagcacctggtacttagat
gaatctactctaagtgacaacataaagaaaacccttcataaattctgtggaccctctcct
gttgttttcagtgacgtaaattcaatgtatctctcttccacggagccaccagctgctgct
gagtgggcctgtctcctgcgtcccctgcgaggaagagagcctgaaggaatctggaacctg
ctttccattgtgcgggagatgtttaagagacgggatagcaacgcagctcctttgctggag
attctgactgaccagtgtctcaattatgagcagataaccggctggtggtacagtgtgcga
acatctgcatcacacagcagtgctagcgggcacacaggacgcagcaatggccagtcagaa
gtagctgctcatgcttgtgcaagtatgtgtgatgagatggtggttctctggaggctggct
gtccttgacccaactattagtccacagaggcgcagggacctttgttcacagctcagacag
tggcagctgaaagtcatagataatgttaagaggggtcagcacaagaagtcactggagaag
ctcttccagggtttcaagccagccgtggaagcctgttacttcaactgggaggacgcttat
cccattcctgggatcacgtatagcagcactgacaaaaagaactcattctgttgggtaaag
gccatccagcagaggagctgccggttgcagtgtgcagaaacggcctgtgaggctggtaga
acccatggacaggagcccgggggaccatgtctgcagcctggggacaggctgcgtccctct
ccccaggagccagcagttcgtccaaaggaacttactggaaagcggaaagttgtctctgaa
acaccgcagagggttctgagacgactttcagcagaaggcgataaagctgtgtataagact
gcagtgggcaaagcaaagttgccagtgagcaaaggcttgaccagtaaacatagtgggaaa
cgccgcatgagcagtgaagacagctctctggagccggacttggcagagatgagcctggat
gacagcagcttggctctgggggcagaagccagcaacacgtttagttttgcagaaagccca
ctgagcaggagctacagggacgcctttgaggaggatggcggggtgtacttttctgaggga
cctgagcccagtgtcaggagcagttctatggccaagaaatctcccaaggatcctgtggga
gaaatgggtagtgatgatgacgaccttccttctgcagacgagaacagcggtggtgtgagc
ctgaagccagaagaagtgggagagaatggtgcagtggggggaggggatgatggagaagag
gaagacgattaccaggtatactatctgaatccacaagaggtagccaaggaagatgatgac
aaagctgacgggggaaacgaagaggagcaggatatgtttgctggtataaagcctctggag
caggagaaccggatggagatcctgtttgcctgtgcggaggccctgtatgcacatggatac
agtaacgaagcacgccgcttaaccgtggagctcgccagggacctactggccaacccccca
gatctcaaagtagagcagccgccaactaagggcaaaaagaacaaggtatcaaccagcaag
cagacgtggatggcaaccaacaccttgtctaaagctgccttcctgctgccggtgtttttt
ntttaccagaacctggctttccagataggaatgtttgctctggagctgcagaggccacct
gcctctacgaaggctctagaggtgaagctggcatatcaggagtctgagattggaggcctc
ttgaagaggattcctttgggcagcagagagatgaacactattcgaggacgagctgaagaa
ctgcgggaagggacgctctgcgactaccgacctgtcctgcctctgatgttggctagcttt
atatttgacgtcctgtgcgctccagtggtttctcatacaggctctagacccgcaagccgt
atttgcaatagtgaaatgcctggagatgaagagcttggttttgaggcagctgttgctgct
cttggcatgaaaacaactgtcagtgaagcagaacatccgctgttgtgtgaaggcacccgg
agggagaaaggagatctagcgttagccctgatgattacttacaaggatgatcagtccaag
ctgaagaagattttagacaaactcctggacagagagagtcaaactcacaaaccacagact
ctgagttccttctactcatccagcaagcctacagtaccaaatcaaaaatctccttccaaa
catgctgcccagtccactgcagctatccagcagcttccagggacttctgtcactcagcaa
gctgctgtgagcactgcggtccagagcagtcccgagaacttcgtggagaagagtgcacag
gagagctctcagaggtccccctgtgagccagctgcagaggccactgtcctgaaacaagag
ggaaaggtccccagtcgtctggcccttgggaaccgaggtggatacaatgggagatgctgg
ggttcacctgtcaggcagaagaagaagcacacaggcatggctagtattgacagcagtgct
ccagaaaccacctctgacagttctccaacgctcagtcggcgtccgctacgtgggggatgg
gcaacaacatcttggggcagaggacaggacagtgacagcatcagcagttcttcaagtgat
tcactgggatcttcatcttccagtggcagtaggagagccagtggcggagcccgtgcaaag
accgtggaggttggcagatataaagggaggcggctggagagccatgctcctcatgttccg
aaccagccctcagaggcagctgctcacttctactttgaactggccaagacagtccttatc
aaagcaggtggaaacagcagtacctctatcttcacccacccgtcctccagtggtggacac
cagggaccacaccgcaaccttcacctctgcgccttcgagattgggctgtatgcactaggg
ctgcacaactttgtgtctcccaactggctctctcgaacttactcctcccatgtctcttgg
atcacagggcaggccatggagatcggtagtgcagccttgaacatcttggtggagtgttgg
gatggacatctgactcccccagaggtggcatcactggcagacagagcttcacgggccaga
gactccaacatggtgcgggcagctgctgaactggcactcagctgcctgccccatgcccat
gccctgaacccaaatgagattcagagggctctggtgcagtgtaaggaacaggacaatctg
atgctggaaaaggcctgtatggcagtagaggaagcggccaaaggaggtggcgtgtaccca
gaagtcctctttgaagtagctcatcagtggtactggctctatgaacagactgttggtggg
acaccagcccagagagaaggtgccactggctgcagtgccagtggtgcccgggctgcctcg
gaagcagcgcgtgggttgacggacaaccgggtgacctctgagccgaccactgtcacggtg
gcagctgcggtcaccgcggcagcaacagtcatgccggtgatctctgtgggttccaccatg
taccagcagcacacgatggcagggccggcgatggcgcacacacacacgcagggtctccac
ccttacaccacccttcaaactcacatcccctgtaatccccagtatattggacacactatc
cagcacatgccgcgcccagctgtcttcccggttcctggctcagcgtacccacagggtgtc
cacccagcattcataggagcacagtacccgtactcggtaacaccaccttcactggcaact
actgcggtgtcgttccccggcgtgcccgtcccatccatgacgcagatcgccgtgcatccc
tatcacagtgagacgggactgtcactgtcttccaacgtagcgataggaagtgtccatgca
ggatcaacgttcccagcgattcagggggcttccttgacaactctgtcctcacagcccaac
tcccttgttacagggggttttcctgccgaggatgagcagcacagtcagcctgtgagtccc
cagggtctgcactacctccactctgcataccgagttgggatgctggctctggagatgctt
ggccgaagagctcacaacgatcatcccaacaacttctcccgcagcccaccctacacagag
gatgtaaaatggctccttgggttagctgcgaagttaggtgtaaactacgtgcatcagttt
tgcgttggtgcagccaagggggtgctgagcccttttgtgctccaggagatcatcatggaa
gctctacagaggctcaaccctgcccatgtgcacaaccacctgcgcaccccagccttccat
cagctggtgcagaggtgccagcaggcctacatccagtacatccatcatcggctgatccat
ctcactccagctgactacgatgacttcgtgaatgccatccgcagcgccagaagcgccttc
tgcctgactcccatgggcatgatgcagtttaatgatattctccagaacctaaagcgcagc
aagcagacaaaggagctatggcaaagggtctctctggaaatgaccaccttctcgccgtga
DBGET
integrated database retrieval system
