Apaloderma vittatum (bar-tailed trogon): 104275324
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Entry
104275324 CDS
T08559
Symbol
DDX20
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104275324 (DDX20)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104275324 (DDX20)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
104275324 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
SiaC
AAA_30
CMS1
Motif
Other DBs
NCBI-GeneID:
104275324
NCBI-ProteinID:
XP_009869552
LinkDB
All DBs
Position
Unknown
AA seq
645 aa
AA seq
DB search
PLWRLFPDLIVQAKSGTGKTCVFSTIALDAVVLESPATQILILAPTREIAVQIHAVVATI
GVKMEGLECHVFIGGTPLSQDKARLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEA
DKLLEEGSFQEQINWIYSSLPANKQMLAVSATYPESLANALTRYMREPTFVRLNPTDPSL
IGLKQYYKIVSSHPLPHKTFEEKTQHLQELFSKIPFNQALVFSNLHSRAQHLAEILTXKK
TAECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPVDWETYM
HRIGRAGRFGTLGLSVTYCCRGEEENMMMKIAQRCNLQLLPLPEPIPPGMMDQFEDGEVE
VKPRNQYCSLSKIVFQRYLSIFLIFQRNRVKPVSRTDEQRNARAPDEETLKKNLPKIPCL
SSFKNQTNNPWSFSEFVEDYEYFIKEGLEREVEILRSYSGPGEQGELPRNGGVEWREVEC
NTGTVANGVVSGDSDGSYSSRASSDSRENNSRFEAFSDTRESNAVPTTRQGHGGFCPTPE
KPREPSQVPKQNQVKKKVPKQNVKQKKSHYQQFSRKTEEDCSCSSWGDGVPYEAWSYKNY
WKSYYQAWQNYYAVVSHYRRSYRQFTWVNAYRANSVYLQELLKSD
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
ccgctgtggcggcttttcccagatctcatcgtgcaggccaagtccggcaccggcaaaacc
tgcgtgttctccaccatcgccctggacgcggtggtgctggagagccccgccacgcagatc
ctgatcctggccccgacacgagagatcgcggtgcagatccacgccgtcgtggccaccatt
ggggtgaaaatggaaggcctggagtgccacgtcttcatcggagggactcctctgagccag
gacaaagccaggctcaagaagtgccacatcgcggtgggctcaccaggtcgaataaaacag
ctcatagagttggactacttgaacacagccagtatccggcttttcattctcgatgaagca
gacaagcttctggaagaaggcagctttcaggaacaaatcaactggatttactcttcactc
ccagccaataaacagatgcttgcggtttcagccacttaccctgaatcactagctaatgct
ttgaccaggtacatgagagagccgacgtttgtgaggctgaaccccactgatccaagtctc
attgggctgaagcagtattacaaaatcgtgagctcccatccgcttccgcataaaactttt
gaggaaaagacccagcacctgcaggaattgttcagcaagattccgtttaatcaagcctta
gtcttttcaaatttacatagcagggctcaacatttagctgaaatactgacataaaaaaaa
actgctgagtgcatttcaggtaacatgaaccaaaatcagcgtcttgatgctatggctaaa
ttaaagcaattccactgcagagttctgatttccacggacttgacatctcgtggaattgat
gctgaaaaagtgaatctggttatcaacctggacgtccctgtggactgggagacgtacatg
catcgcatcggcagagctgggcgctttgggactttgggtctatctgtgacatactgctgc
cgcggagaggaagaaaacatgatgatgaaaattgctcagagatgtaaccttcagctactt
cctctaccagagccgatacctccggggatgatggatcagtttgaagatggggaggtagaa
gtcaaacctaggaaccagtactgcagcctctccaaaatagtttttcagaggtacctcagc
atcttcctgatcttccagaggaatcgagtcaaacccgtctccagaacggatgaacaacgt
aacgctcgggctccagatgaggagaccttaaaaaaaaatctccccaaaattccgtgcctg
tcttctttcaaaaaccaaacaaacaatccctggagcttctcagagtttgttgaagactat
gagtatttcattaaagaagggctggagagagaggtggaaattttgagaagctattcaggc
ccaggagaacaaggtgagctccccagaaatggcggagtggagtggagagaggtggagtgt
aacacagggacggtagcaaacggtgttgtgtctggtgacagtgatggttcgtacagttcc
agggcttcctccgatagtagggaaaataactcgcgttttgaagcattttcagacactcgg
gagagtaatgctgttcccacaacacgtcagggtcatggaggcttctgtcctacaccagaa
aagcctcgggagccatcgcaagtcccaaagcaaaatcaagtgaaaaagaaagttccaaaa
caaaacgttaaacaaaagaaaagccattaccagcaattttctaggaaaactgaagaggac
tgctcctgcagctcttggggtgatggtgttccctatgaggcttggagttacaaaaactac
tggaagtcttactaccaagcgtggcagaactactacgctgtggtgtctcactataggagg
agttacagacagtttacctgggtgaatgcctatcgtgccaactcagtctatcttcaggag
ctgctgaaaagtgattga
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