Apaloderma vittatum (bar-tailed trogon): 104275325
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Entry
104275325 CDS
T08559
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03440
Homologous recombination
avit03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104275325 (TOP3A)
03460 Fanconi anemia pathway
104275325 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avit03032
]
104275325 (TOP3A)
03400 DNA repair and recombination proteins [BR:
avit03400
]
104275325 (TOP3A)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
104275325 (TOP3A)
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Topoisomerases
104275325 (TOP3A)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
104275325 (TOP3A)
FA (Fanconi anemia) pathway
104275325 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-C2H2_10
Zn_ribbon_GRF_2
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
104275325
NCBI-ProteinID:
XP_009869553
LinkDB
All DBs
Position
Unknown
AA seq
1002 aa
AA seq
DB search
WRLFSRAGAAEEAALQRIRKVLCVAEKNDAARGIADLLSNSRMRRREGLSKFNKIYEYDY
QLFGQTVTMVMTSVSGHLLAHDFKMPFRKWHSCNPLALFDAEIEKYCPENYMDIKRTLER
EVQQCQALVIWTDCDREGENIGFEIIHVCKAVKPNLRVFRARFSEITPHAVRTACENLTQ
PDQKTSDAVDVRQELDLRIGAAFTRFQTLRLRKIFPDILADQLISYGSCQFPTLGFVVER
FKAIQAFVPEAFYKIKVTHDHEDGSVVFNWKRNRLFNHTACLVLYQICMEDPVATVVEVG
SKPKSKWRPLPLDTVELEKLASRKLKINAKETMRIAEKLYTQGFISYPRTETNIFPKELN
LSALVQQQAQDPNWGAFAQRILDRGGPTPRSGTKSDQAHPPIHPTKYTATLQGNEQRLYE
FIVRHFLACCSEDAKGQETTVEIDXXXXXXXXXXXRFIAQGLMILARNYLEVYPYEKWSD
KVIPLYEKGSRFQPTTVEMVDGETSPPLLLTEADLIALMEKHGIGTDATHAEHIETIKTR
MYVGLTADQRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKQICEGKKDKSVVLQQ
QVQKYKQVFIEAVARANKLDQALAQYFGEATEIAEQEEVYPAMPVSVRKCPQCNNDMVLK
SRKNGGFYLSCTGYPACKTAVWFPDFVLDVTRDDSICAVCKPHPVHRLKFKFKRGSVPPV
MPLEFVGCIGGCDEMLKELLDLKYLNRASQPTSSGSQQGNQLRVNNSFNRPSAENRRVRG
STNPALGHLSLSSTRPAPSAAPDDRNNAVVCNCGNEALLLTVRKEGPNQGRQFYKCGAST
CNFFLWADEQPEDRRAAAPQGSAPLQPFAGRGPAGFQHLGGGGRGPEVFGSNGSDSGGGT
VCNCNQPAVTRTVQKDGPNKGRQFHTCSKPREQQCGCFQWADENVAPGPSGDVSSNQFGG
RGLGSKAKRPSSLSSGAAAKKPRTCSICHQPGHTRKTCPQNH
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
tggcggctcttctcgcgggctggagctgcggaggaggcggccctgcagaggatccggaag
gtcctgtgcgtggcggagaagaacgatgctgcccgagggatcgcggatctgctctccaac
agcaggatgcgacggcgagaagggctttccaagttcaacaagatctatgaatacgactac
cagctgtttggccagaccgttaccatggtgatgacatccgtgtcaggacacttgctggct
cacgattttaagatgccctttagaaaatggcatagctgcaaccctctcgctctttttgat
gccgaaatcgagaagtattgccctgaaaattacatggatatcaagagaaccctcgaacga
gaagtccagcagtgccaagctctggtgatctggaccgactgcgatcgagaaggagagaac
atcggcttcgagataatccacgtttgcaaagctgtaaagccaaacctccgggttttccga
gcccgcttttcagagatcacgcctcacgctgtcagaacagcctgcgagaacctcacccaa
ccggatcaaaaaacgagcgatgccgtcgacgtcaggcaggagctggacctcaggataggt
gctgccttcaccagattccagacactgcggctccggaagatcttccctgatattttagcc
gaccagctgatcagctacggtagctgccagttcccaacgctgggctttgtagtggaacgc
tttaaagccatccaggcctttgttcctgaagccttctataaaataaaagtgacccatgat
cacgaggacggcagcgtggtcttcaactggaagaggaaccggctctttaatcacacagcg
tgcctggtcctttaccagatatgtatggaggatccggtggcgaccgttgttgaggttggg
agcaagccaaagagcaaatggaggcccctgcccctggacactgtggaactggagaagctg
gcttcccgcaaactgaaaataaatgcgaaggaaaccatgagaatagcagaaaaactctat
actcaaggcttcattagttaccctcgaaccgagaccaacattttccccaaggagctgaac
ctctctgccttagtccaacagcaagcccaggacccaaactggggagcgttcgcgcagagg
attttggatcggggtgggccaacccctcggagtggaaccaaatcagatcaggctcaccct
cccattcaccccacaaaatacactgccaccctgcagggcaacgagcagagactgtacgaa
ttcatcgtgcgccattttttggcttgctgctctgaagacgccaagggacaggaaacaacc
gtggagattgacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcggttcatcgctcaa
ggactaatgatcctggcccgaaattatctggaagtctatccttacgagaagtggagtgat
aaggttatcccactgtacgagaaagggtctcgctttcagcccactaccgtggagatggtg
gatggggaaaccagccctcctctgctcctcacagaagcagatctcatcgctctgatggaa
aaacatggcattgggactgacgccactcacgccgagcacatcgagacgattaagacacgg
atgtacgtgggccttacagcggaccagcggttcctcccaggccacctgggcatggggctg
gttgaaggctacgattccatgggttatgagatgtccaagcctgaccttcgagccgagctg
gaggctgatctgaaacagatctgtgaggggaagaaagacaaatctgtagtgttacagcag
caggtccaaaagtacaagcaagtcttcattgaagccgtggccagagccaacaagctggac
caggccctggctcagtattttggagaagccacagaaattgcagagcaagaggaggtctac
ccagcgatgcccgtttctgttcggaagtgcccccagtgcaacaacgacatggtgctgaag
agcaggaagaacggcgggttctatctcagctgcacgggttacccagcttgtaaaactgcc
gtctggtttcccgatttcgtgctggacgtgaccagggatgacagcatctgtgctgtgtgt
aaaccgcatccagttcacagattgaagtttaaattcaagagaggcagcgttccgcccgtg
atgcccctggagtttgttggttgcatcggaggctgtgatgagatgctgaaagagctcttg
gacctcaagtatttaaacagggcgtcccaacctacgtcgtcaggcagccagcaagggaat
cagttgcgggtcaacaactcctttaacagacctagcgctgaaaacaggcgcgtgcggggc
tccacaaacccggccctgggacatctctctctgagctcaacaaggcctgctccttcagct
gctccggacgacaggaacaacgcggtggtgtgcaactgcggcaacgaagccctgctgcta
accgtgcgcaaagaagggcccaaccaaggcaggcagttttataaatgcggcgccagtacc
tgcaactttttcctctgggctgatgagcagccagaggacagacgtgctgcagctccacag
ggctctgccccgctccagccctttgcaggaaggggcccggcaggatttcagcacctagga
ggaggagggagaggcccggaggtcttcggaagcaacggctctgattcaggaggcggcaca
gtctgcaactgcaaccagccagccgtcacccgcaccgtccaaaaggacgggcccaacaaa
gggcggcagttccacacctgctcgaaaccccgcgagcagcagtgcggctgcttccagtgg
gcggatgaaaacgtggcaccaggtccttctggagatgtctcttcgaaccaatttggcggc
agagggttgggcagtaaagccaagcgaccaagcagtctctcctcgggagccgctgccaag
aaaccacggacctgtagcatttgccaccagcctggccacactaggaaaacctgtcctcaa
aaccactga
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integrated database retrieval system
