Apaloderma vittatum (bar-tailed trogon): 104275389
Help
Entry
104275389 CDS
T08559
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
avit00536
]
104275389
Glycosaminoglycan binding proteins [BR:
avit00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
104275389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
EGF
Plasmod_Pvs28
Dam
Motif
Other DBs
NCBI-GeneID:
104275389
NCBI-ProteinID:
XP_009869626
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
KNVVQSLIVCQKDLINVVKVKAYEAGICTFAIEWFLLKLSYTKEAMGSSCTDWSCGGTPT
PASDADATTLRDAAANVPPPHEISVEGPVGGTIQEIEDADTTINNEIKKQDEKLVRPITE
QMIEFSVLITGEKYSEELKDPASARHQQLSEQFISQIKSVFEGLPGYKNIHVLDYSSPED
DSGVEVHYAVTFDGKAITNATWDLINLHSNKVEDNSFMGIEDNPTVVYTISDFRDYIAEI
LQKNALFENTSLSLDPNSLQLTNVQEILHPTPEDPSWIPEHPVVLERPEFDDSTFLAERP
SADESTVSNTLPFDFTKPDSISDSEQSNDNEIHPRPENLDSEASLAPEAPLSSEADVTSL
PDGLSLEEGDWTPDLITAPGSLDVFEDTILSEDLLPSSPSHLVPEEPPSTDDVVPLISAP
TVPSSSVVETDIKEPVSAEKEEIVQGGPAGSYDADSAFHPMEDEPDIYVGDRVIYDDGSG
SAFDGSGKEMDSGIWPWEEATLEPVFYPSPDSWLEDDNESLLISTEDIPEGMILDYILNS
RNKLDDDPSKDRKEGMVNIKEDFLDESEIFVFPDATTRQVPLLQTEEPSSMGSSAQTERV
GMYDSSSVKPPLVLEPSVDHSLVDMPTESPISPHDTHLSVGDDLLASAGTISMEQPEESS
VGQNIFSEAAGHQKEDTTTAEQLFTVEQSDVTEAATVDQLDTRFSETILTAGPSMTNAEA
STGEQQTLDSSLAGQDTTGSAVKKTADVWPADRALESSLDQAVQSATPAATEVPSLIDQT
TVLEGFTGQGATDHDTHVSMSFSTFKMVSVTMRPVELPSHVHVQSTVPPSVATSAKLGDE
TTGILDVSVDLDHVSTVHFSPELTEEERSGTDSHVKLTTHIHSTEMASVAWATHENRSTT
TIPSRALVVFFSLRVTNMMFSEDLFNKNSPEYKALEQRFLELLVPYLQSNLTGFQNLEIL
NFRNGSIVVNSRMKFAKPVPRNVTNAVYMILEDFCNTAYHTMNLAIDKYSLDVESGEQAD
PCKFQACNEFSECIVNRWSGEAECVCNPGYLSIDGLPCNSICDLQPNFCLNDGKCDISPG
QGAICRCRVGENWWYRGEHCEEYVSEPLVVGIAIASVAGFLLVASAVIFFLARTLRDQYT
KSDTEDSQGQGDSLSSIENAVKYNPMYESDTTGYSHYYRRYPQLTSYSSTSAETSTDYSS
EEIRHIYENSELTKEEIQDRIRIVELYAKDRQFAEFVRQHQMKLL
NT seq
3739 nt
NT seq
+upstream
nt +downstream
nt
gaaaaacgttgttcagtctctcatagtctgtcaaaaagacttgattaatgtggtgaaggt
gaaggcatatgaagctggaatttgcacttttgccatcgaatggtttctactgaaattgtc
ctatacaaaggaagcaatgggcagctcctgtaccgattggtcatgtggtgggactccaac
tccagcttcggatgctgatgctaccacattgagagatgcagctgccaatgttcctccccc
tcatgagatctctgttgagggtcctgttggtggtaccatccaggagattgaagatgcaga
tactactatcaacaatgagataaagaagcaggatgagaagcttgtgagacccataactga
gcagatgattgaattcagcgttttgattactggtgaaaagtacagcgaggagctgaagga
cccagcttctgcaaggcatcagcagctgtctgagcaattcatttctcagatcaaaagtgt
atttgaaggactacctggatacaagaacatccatgttctggattacagctctcccgagga
tgacagtggagtggaagttcactatgctgttacatttgatggaaaagccatcaccaatgc
cacctgggacctgattaaccttcattccaacaaggtggaggacaactcctttatgggcat
agaggataatccaacagttgtgtacacaatcagtgatttccgagattatattgctgaaat
cctccagaaaaatgccttgtttgaaaacacttctttgtctttagacccgaactctctcca
acttactaatgtgcaagaaatactccaccctacaccagaagacccatcctggattcctga
gcatccagttgtgctggagcgcccagagttcgatgacagcacctttttagctgaacggcc
ttcagcagatgagtcgactgtcagcaataccttgccctttgatttcaccaaaccagactc
catctcagatagcgaacagtccaatgacaatgaaatccatccaagaccagaaaatctgga
ctctgaggccagtttggcacctgaagctccactttcctcagaggctgatgtcacttcttt
gcctgatggactgagtttagaagaaggggattggactcctgatttgatcacagcccccgg
ttctttagatgtgtttgaagataccatactatctgaagaccttttgccttcaagtccgtc
tcacctcgtgcctgaagaacctccatctacagatgatgtagttcctctaatttctgcacc
aacagtgccctcttcatcagtcgtggagactgatattaaagaaccagtttctgctgagaa
agaagaaatagttcaaggtggccctgcaggcagttacgatgcagactctgcattccaccc
tatggaagatgaacctgatatatatgttggagatagagttatatatgatgatgggtctgg
ttcagcttttgatggttcaggaaaagaaatggattcaggtatttggccttgggaagaagc
aacactggaaccagttttctacccaagtcctgacagctggcttgaagatgacaatgagtc
tttgttaatcagcactgaggatattcctgaaggtatgatcttagactatattcttaactc
taggaataaattagatgatgatccttccaaagacaggaaggaaggtatggttaatataaa
agaagatttcctcgatgagtctgaaatatttgtctttccagacgctacaactcggcaggt
acctctgttacaaacagaagagccatcatctatgggatcatctgcacagacagaaagagt
gggcatgtatgattcttcttctgttaaaccacccttggttttggagccttcagtggacca
ttcccttgtagacatgccaactgagtcccctatctcaccacatgatacacatctgtctgt
gggagatgatctcctcgcatctgcagggaccatcagtatggagcaacctgaagagtctag
tgtaggtcagaacatcttttctgaagcagctggacaccaaaaagaagatacaacaacagc
agaacaactattcacagtggagcagtcagatgtaactgaagctgctacagtagaccagtt
ggatacaagattttcagaaactattctgactgcaggtccttccatgacaaacgctgaagc
ttccacaggggagcagcaaaccctagattcatcactggcaggtcaagacactactggatc
agcagtgaagaaaacagctgatgtttggcctgctgacagagccctagaaagctcattaga
tcaggcggtgcaatcggcaacaccagctgccactgaagttccctctttaatagatcagac
cactgttctagagggctttactggacagggtgctactgatcatgacactcatgtttccat
gagcttcagcactttcaaaatggtgagtgtaacaatgaggcctgttgagcttccgtccca
tgtccatgtgcaatctacggtaccaccgtctgtggctacttcagcaaagctaggagatga
aacaacgggaatcctggatgtttcagtcgacctggatcatgtgagcactgtccatttttc
ccctgagctgactgaggaggaaaggagtgggactgacagtcatgtgaagctgacaactca
catccattccacagagatggccagcgtggcttgggccacacatgaaaatcgcagcactac
taccatcccatcacgagctctagttgtatttttcagtcttcgagttaccaacatgatgtt
ttcagaggatctgttcaataaaaactcccctgaatacaaagcactggagcagcggttctt
ggaactgctggtgccctatctgcagtcaaatctgacaggcttccagaatctggaaatttt
gaacttcagaaatggcagcatcgtggtgaacagtcgaatgaaatttgccaagcccgtgcc
tcggaatgtcaccaacgctgtgtacatgatcttggaagacttctgcaacactgcgtatca
caccatgaacctggccatcgataaatactcccttgatgtggaatctggtgagcaagcaga
cccctgcaagttccaggcctgcaatgagttctccgaatgcatcgtaaatcgctggagcgg
ggaagccgagtgcgtctgcaatcctggctacctgagcatcgatgggctgccgtgcaatag
catctgtgatctgcagcccaacttttgcctgaatgatggcaagtgcgacatcagccctgg
gcaaggggccatctgtaggtgtcgtgttggggagaactggtggtacagaggggagcactg
tgaagaatatgtgtccgagcccctggttgtgggtattgcaattgcttctgtggcgggatt
ccttcttgtggcatctgctgtcatcttcttcttagccaggacccttcgagaccagtacac
caaaagtgataccgaggactcgcaggggcagggtgacagcctctcatccattgagaatgc
agttaaatacaaccccatgtatgaaagtgatacgactggctacagccattattaccggag
ataccctcagctaacgtcctacagttctaccagtgcagagacttccacagactacagcag
tgaagagatcaggcacatttatgaaaacagtgagcttactaaggaggaaattcaggacag
gattcgaattgtagaactctacgctaaagaccgtcagtttgcagagtttgttaggcagca
tcaaatgaagctgctttaa
DBGET
integrated database retrieval system
