Apaloderma vittatum (bar-tailed trogon): 104275471
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Entry
104275471 CDS
T08559
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
avit03037
]
104275471 (NPHP3)
Cilium and associated proteins [BR:
avit03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104275471 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_17
TPR_19
NPHP3_N
14-3-3
TPR_11
TPR_6
NACHT
AAA_16
DUF2225
KAP_NTPase
AAA_22
HAT_Syf1_CNRKL1_C
AAA_14
AAA_19
MAGE
Viral_helicase1
ARM_TT21_4th
T2SSE
Motif
Other DBs
NCBI-GeneID:
104275471
NCBI-ProteinID:
XP_009869736
LinkDB
All DBs
Position
Unknown
AA seq
1212 aa
AA seq
DB search
MACPTLGRRGAVPALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRET
KENEIQDLLRAKRELEAKLQRLQAQGIQVFDPEESDSDDNCTDVTAAGVQSEYWNGGALG
SEPSMGSMMQLQQSFRGPEFAHSSIDVEGPFANINRDDWDAAVASLLQVTPLFSHSLWSN
TVRCFIISTDETQPEVDILIRNYSPKLQRVCETMGYFFQVVTFSGENERPLKDVRKWEIE
KSSLVILLLHLTLPNCLLEDCEEAFLRNPEEKPQLIYHRKEDGRVSSVSVQQLIEQITYM
NKAKVIDHIGGVEEGAYEIYNCVEKIIKQDILGYEMTELEGKELDSKEESTAPEEEVFGD
VLWDAHDEQEQMEAFQQASNSTCELGFEKYFERLNDLVAAPAPIPPLLVSGGPGSGKSLL
LSKWIQLQQKHSPNTLILYHFVGRPMSTSSESALIIKRLTLKLMQHSWLVSPLTLDPAKL
LEEFPRWLEKLSARHQGSIIIIIDSIDQIQQAEKHMKWLIDPLPVNVRVIVSVNVETCPQ
AWRLWPTLHLDPLNSKDVKSLISAECNSANVKLTKEQEKKLERHCRSAATCNALYVTLLS
KIIAHVGSTGNIDETLEQCFQCQDTVSLYRLVLRSIQESLQSDKEKGLLREILCVISVSH
NGVSESELMELYPQLSSAVLASLVHSLHKMCLLTYGCGLLKFQHLQAWELVRLEYMEEGE
NTISAYRKKLVEYFTVQLSQDRVTWRSADELPWLFQQQSDKQKLHKCLLNLFVSQNLYKR
GHFAELLSYWQLVGKDKSSMAAEYFDSLKEYEKSCEGEESMNCLADLYETLGRFLKDLGL
LSQAVAPLQRSLEIRETALDPDHPRVAQSLHQLAGVYVQWKKFGNAEQLYKQALEISENA
YGAEHPRVARELDALATLYQKQNKYEQAEQLRKKSFKIRQKAARRKGSLCGFALLRQRAL
QLEELTLGKDTPDNARTLNELGVLYYLQNNLETAELFLKRSLEMRERVLGPNHPDCAQSL
NNLAALYNEKKHYDKAEELYEKALDIRRRALAPDHPSLAYTVKHLAVLYKRMGKLDKAVP
LYELAVEIRQKSFGPKHPSVATALVNLAVLYCQMKKQVEALPLYERALKIYEDSFGHMHP
RVGETLKNLAVLSYEGGDFEKAAALYKRAMEIKEAETVLIGGKATSRHSSSGDTFSIKSA
LSPHIFLEHGQR
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtcctaccctggggaggcgaggcgccgtcccagcacttcagaaaacttaccag
aaaatactcagagagaaggaaagtgcgttagaagctaaataccaagccatggagagagct
gctacctttgaacatgatcgagacaaggtcaaaaggcaattcaagatttttagagaaact
aaagaaaatgagattcaggacttactaagggccaaacgagagctagaagcaaaacttcag
agactccaggcccaaggcatccaagtgtttgatcctgaagagtctgattctgatgataac
tgtacggatgttacagctgctggcgtgcaatccgaatactggaacggtggagctttgggg
agcgagccatccatgggtagcatgatgcaacttcagcagtctttcagagggcctgaattt
gctcatagctccatagatgttgagggaccatttgcaaatataaacagggatgattgggat
gctgctgttgccagtttattacaggttactcctctgttttcccactccctgtggagtaac
acagtgagatgttttattattagtactgatgagactcaaccagaagtggacatccttatt
agaaactactcaccaaaacttcaaagagtctgtgaaactatgggatacttctttcaagtt
gttactttttcaggagaaaatgaaagacctcttaaggatgtaagaaaatgggaaattgaa
aaaagttcattagtcattttgcttctgcacttgactttgccaaattgtttgctggaggac
tgtgaagaagccttcttgagaaatccagaagaaaaaccacagctaatttaccacagaaag
gaggacggcagagtcagctcagtctcagtgcaacagttaattgagcaaattacttacatg
aacaaagcaaaggtgattgatcatattggaggtgtggaggagggagcgtatgaaatatat
aattgtgtggaaaagataattaaacaggatatattgggatatgaaatgacagaactagaa
ggcaaggagttggatagtaaggaagagtccacggctcctgaagaagaagtttttggtgat
gtgttgtgggatgcacatgatgaacaagaacagatggaagcttttcagcaggcctctaat
tcaacatgtgagctggggttcgagaaatattttgaacgtctaaatgacttagtagcagca
ccagcaccaattccccctctgcttgtatcaggaggaccgggctctgggaagtctctcctt
ctgtcgaaatggatccaattgcagcagaagcattcaccgaatactctaattctttaccac
tttgttgggagacccatgtctactagttcggaatctgcattgataattaaacgccttact
ttaaagcttatgcagcactcttggttagtgtcacctctaactttggatccagctaaactt
ctggaagagtttccccgctggcttgaaaaactttctgcacgtcatcaaggcagcattatt
ataattattgattctattgaccaaatacagcaagctgagaagcatatgaagtggctgata
gatccgctgcccgtgaatgtcagagtgatcgtatcagtgaatgtagaaacttgtccacag
gcttggaggttgtggcccactcttcatcttgatccgctgaattccaaagatgttaaatct
ctcattagtgcagaatgcaactctgcaaatgttaaattgactaaagagcaggaaaagaag
cttgagaggcactgtcgatccgccgcaacttgcaatgctttgtatgtcactctcttgagc
aaaatcattgctcatgttggaagtacaggaaatattgacgaaactcttgaacaatgtttc
cagtgtcaagacacagtgtcactgtacaggcttgttctaagatcaattcaagaatcgttg
cagagtgataaagagaaaggtcttttgagagagatactgtgtgtcatcagcgttagccac
aatggtgtgagtgagtctgagctgatggaactttatccccaactgtcttctgcagtgtta
gcctcacttgttcacagcctgcacaaaatgtgtttgctgacgtatggctgtggtctgctg
aagttccagcacctccaggcttgggagttggtaagactagagtatatggaagaaggtgaa
aatactatttctgcctacagaaaaaaactggtggaatatttcactgtgcagctaagccaa
gaccgagtgacttggagaagtgcagatgaacttccctggctcttccagcagcagagtgat
aagcaaaagctacacaagtgtcttttgaacctcttcgtatcccaaaacctttacaaaagg
ggacattttgcagaattgctgagttactggcagctggttgggaaagataagagctctatg
gcagctgagtattttgactctctgaaagaatatgaaaaaagctgtgagggagaggaaagt
atgaactgcctggctgatctttatgagaccctgggacggtttcttaaggacctaggtctt
ctaagtcaggctgtagctcctctgcagcggtctctggagattcgagagactgcgctagat
cccgaccacccaagggtggcacagtcactccaccagctagcaggagtttatgttcagtgg
aagaagtttggaaatgctgaacagttgtataaacaggcactggaaatctcggaaaatgct
tacggagctgaacatcctcgggtagcccgtgaacttgatgcacttgcaaccttgtaccaa
aagcagaacaaatatgaacaagctgagcaactgaggaaaaagtccttcaaaatacgccag
aaagcagcaaggcggaaaggcagtctgtgtggctttgctctcttacgtcaaagagccctg
cagctggaagagctcacgttaggcaaggatacaccagataatgctcgaaccctcaatgag
ctgggagtactctattacctgcagaataatcttgagacagcagagcttttccttaagcgt
tccttggaaatgagagagagagtcctgggacccaaccatcccgactgcgcccagtctttg
aacaacctggcagccttgtacaacgagaagaagcactacgacaaggctgaggagctctat
gaaaaagctttagacatcaggaggagagcactggctccagaccacccctccttggcttac
acggtgaaacacctggcagtgctctacaaaaggatggggaaacttgacaaggctgttccc
ctgtacgaactagcagttgaaattcgacagaagtcatttggcccaaaacaccctagcgta
gcaactgctttggtaaatctagctgtcctttattgtcagatgaaaaagcaggttgaagct
ttacctctctatgaacgtgcattaaagatttatgaagacagctttggtcacatgcatcct
cgtgtgggcgaaactctgaaaaacttggctgtgctaagctacgaagggggagactttgag
aaggcagctgcactttacaagagagctatggaaataaaagaagcagagactgtgttgata
ggtggaaaagcaacttcgcgacactcctcgagtggagatacgttcagcataaaaagcgct
ctgtcaccacacattttcctggaacatggacaaaggtga
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