Apaloderma vittatum (bar-tailed trogon): 104275504
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Entry
104275504 CDS
T08559
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104275504 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104275504 (SMARCD2)
03036 Chromosome and associated proteins [BR:
avit03036
]
104275504 (SMARCD2)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104275504 (SMARCD2)
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104275504 (SMARCD2)
PBAF complex
104275504 (SMARCD2)
GBAF(ncBAF) complex
104275504 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
104275504
NCBI-ProteinID:
XP_009869777
LinkDB
All DBs
Position
Unknown
AA seq
334 aa
AA seq
DB search
VKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKL
RIYISNTFTPAKEEGEGGERVASWELRVEGKLLEDXXXXXXXXXXXFKSLVIELDKELYG
PDNHLVEWHRLPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQ
TRASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDP
IIINHTISVDPSDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIES
INQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLK
NT seq
1003 nt
NT seq
+upstream
nt +downstream
nt
ggtgaaaaggaggaagatggctgacaaggtcctgccacagaggattcgggagctggtccc
agaatcccaggcctacatggacctcctcgcctttgagcgcaagctggaccaaaccatcgc
tcggaagaggatggagattcaggaggccattaagaaaccgctgacgcaaaaacgcaagct
gaggatttacatctccaacactttcacccccgccaaagaagaaggggagggcggtgagcg
cgtggcctcctgggagctgcgcgtggagggcaaactgctggaggacnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnntttcaagagccttgtcatcgagctggacaaagagctgtacgg
gccagacaaccatctggtggagtggcaccggctccccacgacccaggagaccgacggctt
ccaagtgaagcgtccgggtgacgtcaatgtgaagtgcactctgctgctcatgctggatca
ccagccaccacagtacaaactggaccctcgcctggctcgcctgctcggggtgcacaccca
gacccgcgccagcatcatgcaggcgctctggctctacatcaagcacaacaagctgcagga
cagccacgagaaggagtacatcaactgcaaccgctacttccgccagatctttaactgcgt
ccgcatgcgcttctctgagatccccatgaagctggcggggctgctgcagcacccagaccc
catcatcatcaaccacaccatcagtgtggaccccagtgaccaaaagaagacggcctgcta
tgacatcgatgtggaggtggacgatcccctgaaagctcagatgagcaactttctggcttc
caccaccaaccagcaggagatcgcctccctggatgccaagattcacgagaccatcgaatc
catcaaccagctgaagacgcagcgcgatttcatgctgagcttcagcaacaacccgcagga
tttcatccaggaatggatcaaatcccagcggagggacctcaag
DBGET
integrated database retrieval system
