KEGG   Apaloderma vittatum (bar-tailed trogon): 104275527
Entry
104275527         CDS       T08559                                 
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104275527 (RBM22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:avit03041]
    104275527 (RBM22)
Spliceosome [BR:avit03041]
 Complex B
  Other components
   Prp19-related factors
    104275527 (RBM22)
 Complex C
    104275527 (RBM22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12 RRM_PARP14_3
Other DBs
NCBI-GeneID: 104275527
NCBI-ProteinID: XP_009869807
UniProt: A0A091NKI3
LinkDB
Position
Unknown
AA seq 402 aa
DFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPGVRMRFKKTEVCQTCSKLK
NVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQNMEREISNSDGTRPVGALG
KATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNI
KDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLGDTITESDLRNHFYQFGEI
RTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNVKWGRSQAARGKEKDKEGT
TESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPNGPPAVVNIALPPPPGIAPPPPPG
FGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq 1209 nt   +upstreamnt  +downstreamnt
gacttccctattctgtgccaaacatgtcttggagaaaacccgtatattcgaatgaccaaa
gaaaaatatggaaaagaatgcaagatttgtgccaggcccttcacagtgttccgctggtgc
cctggggttcgtatgcgtttcaagaagacagaagtgtgccagacatgcagcaagctgaag
aatgtctgtcagacctgtctgcttgacctcgaatacggtttgcctattcaagtccgggat
gcaggactctcccttaaggatgaaatgcctaagtctgatgtcaataaagagtattacacc
cagaacatggaacgagagatatccaattccgatggcactagaccagttggtgcgctagga
aaagctacttctaccagcgacatgttgctcaagctggctcggaccactccttactataaa
cgtaaccgtcctcacatctgttccttctgggtgaaaggagaatgcaagagaggagaagag
tgtccctacagacatgagaaacctacagatccagatgatcctctggctgatcagaacatc
aaagatcgttattacggaattaatgatcccgtggccgataaacttctgaaacgagcatcc
accatgcctcgcctcgacccccccgacgacaagactatcactacgctttatgttggaggg
cttggagatactatcactgagtcggatctcagaaatcacttttaccagtttggggagatt
cggacgataactgtagtgcagagacaacagtgtgctttcatccagtttgccacccggcaa
gctgcggaagtggctgctgagaaatccttcaacaaactcattgtcaatggtcgccggctc
aatgtcaagtggggaaggtcccaggcagcaagaggaaaagaaaaggataaggaaggtact
acagaatctggaataaagctggagccagttccaggacttcctggagctctgccccctcct
ccagcagcagaagaggaggcttctgcgaattacttcaacctacctcccaatggccctcca
gccgtggttaacattgccttgccacctcctcctggcatcgctccaccaccacctccaggt
ttcggaccacacatgttccacgccatggggcccccgcctcccttcatgagagccccaggc
cccatccactacccgtctcaagatccgcagaggatgggtgcccacgcggggaaacacagc
agcccctag

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