Apaloderma vittatum (bar-tailed trogon): 104275530
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Entry
104275530 CDS
T08559
Symbol
SYNRG
Name
(RefSeq) LOW QUALITY PROTEIN: synergin gamma
KO
K25219
synergin gamma
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
avit04131
]
104275530 (SYNRG)
Membrane trafficking [BR:
avit04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
104275530 (SYNRG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
104275530
NCBI-ProteinID:
XP_009869813
LinkDB
All DBs
Position
Unknown
AA seq
1392 aa
AA seq
DB search
MFPVAGGLGPPQGMIPMQQQGFPMVPVMQSNMPGMMGMNYGSQMPPGAMTMQGGMPLGPM
PAAGMPYMGQASFLGMRPAAPQYTPDLQKQFAEEQQKRFEHQQKFLEEERKRRQFEEQKQ
KLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTPASHPKKPDHPTPSHSAVTV
SHSAFLDDEEFSDFVQGPIETPQVVPQPTSRPFRSAAEAGQLPSEKALVHPLPPAQTPVL
SILHGTAGQVPYFPTSASSLSSHKPGASLEEKVLDNGSNESEQEQTKLKTPEVGHKASAA
SQVHPSRTSSDWDGVGGRECGTSAAEVHKASDQNIAVEECGVGVFPSQDPIQQMMPPWIY
NDGLVPELYKKILETTLTPAGIDTAKLYPILMSSGLPRETLGQIWALANRTTPGKLTKEE
LYTVLAMIAVTQRGIPAVSPDVLNQFPAAPVPTLTGFPMPLPATVSQQPLMPSAPPVSVP
LSIGPTVMGMSITAPAGGAAAQPSAGFLPPYTPSPVVKAEDDDFQEFQDASKSGSLDDSF
ADFQGDVAGASKAASAQHRSSVPSLLMPLPGNKTLSSTDKYAAFKGIAAEKPPESTATFG
DGGDKYSAFRELEQPSESKYLGDNLAEFKPAGTDDGFTDFKTADSISPLEPPAKDKXXXX
XXXXXXTSFPSLPVQSKQQTQAKTSLNLADLDLFSSTGENKQPSFPPAFNTSKSGSFPPP
PLPSTTAQPAAPSKSSSLADDFGEFNLFGEFSNCASASGQDDFADFMAFNNSSGFSEQKP
DDKYNALKLEAAPLPQSGSSTSTVKSGQSCATAAAPTKYDIFKQLSLEGSGAGFEEAKDN
TLSSAKSDDDFADFHSNKFSSACGSGDKSLVDKVAAFKQAKEDSASVKSLDLPSIGGSSV
GKEDSEDALSVQFDMKLADVGGDLKHVMSDSSLDLPTVSGQHPPAADIDDLKCAPFGSYN
SGSAVSSLASYDWSDKEDIHQGKKFSSFVQSSGSGSSAATSVLQKKETLFGSSENITMTT
VSKVTTFSSEDASQDVSFAAFANFKDSGPIPSGPSDDDIGDFGDFARPSAEAQDAAADAN
SEADFLASGVSSELQRESTDDFGEFQSEKPKISKFDFLVATSQGKVKSSEEMIKSELATF
DLSVQGSHKRSLSLGDREISRSSPLPVLEQPFRDRSNTLSEKPALPVIRDKYKDLTGEVE
ESERYAYEWQRCLESALQVIKKANDTLNGISSSSVCTEVIQSAQGMEYLLGVVEVYRVTK
RVELGIKATAVCSEKLQQLLKDIDKVWNNLISFMSLAALTPDENSLDFSSCMLRPGIKNA
QDLACGVCLLNVDSRSKNEEQPVEELPRKAFNSEMDNFKLAYGGHQYHASCANFWINCVE
PKPPGLILPDLL
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctgttgctggtggtttaggcccccctcaagggatgattcctatgcagcagcaa
ggatttccaatggttcctgtcatgcagtccaatatgccaggcatgatggggatgaattac
ggttctcagatgcctcctggagccatgaccatgcagggtggcatgcccttagggccgatg
ccagcggccgggatgccgtacatggggcaggcgtcttttctggggatgcggccggcggcc
ccgcagtacaccccggacctgcagaaacagtttgcagaggaacaacagaagaggtttgag
caccagcagaaattcttagaagaagaaagaaaacggcgccagtttgaagagcagaaacaa
aagctgagactcctaagcagtgtgaaacctaagacaggtgaaaaaagcagggatgatgct
ttggaagccattaaaggaaatttagatggtttttctagagatgctaaaatgcacccaaca
ccagcatcacatccaaaaaagccagatcatcccacaccatcccattctgctgtaactgtt
tcccactctgcttttctcgatgatgaagaatttagtgactttgtacaagggccgattgaa
accccccaagtggtgcctcagcccacttctcggcctttccgttctgctgccgaggctggg
caactgccttcagaaaaggctttggtccatcctcttcctccagcccagactccagtgtta
tccatcctgcatggtacagctgggcaggttccttattttcctacctctgcatcttcactc
agtagccataaaccaggcgcttccttggaggagaaagtcttagataatggctcaaatgaa
tctgaacaagagcaaaccaaacttaaaacacccgaagttgggcacaaagcttcggctgcg
agccaagttcatcccagtcgaaccagcagtgactgggatggtgtaggcggacgggagtgt
ggtaccagtgccgcagaggtgcacaaggcttcagaccaaaacatagcagttgaagagtgt
ggagttggagtattcccttcacaggacccaattcagcaaatgatgcctccttggatttac
aacgacggcttggtcccagagttgtataagaaaattctagaaaccactttgactcctgct
ggaatagatacagctaaactctaccccatactgatgtcgtctggattgcccagagagacc
cttgggcagatctgggcgttagccaaccgaactaccccggggaagctcacgaaagaagag
ctctacactgtcctggctatgatcgcggtgactcagagaggaatacctgcagtgagtcct
gatgtgttaaaccagtttccagctgcccccgtccccactctgaccgggtttccaatgccg
ctgcctgccaccgtgagccagcagcccctgatgccctccgcgccgcctgtctccgtgcct
ctgagcatcgggccgaccgtgatgggaatgagcatcacggcaccggcgggcggagctgcg
gcacagccttctgcggggttcctgccgccctacacgcccagcccggtagtaaaagcagaa
gatgatgacttccaggagtttcaagacgcttcaaagtctggctcactagatgactctttt
gctgatttccaaggggatgtagctggggcctccaaagcagccagtgcacaacaccggagc
agtgttccttctttactaatgccactcccaggtaataagacactctcatcaactgacaaa
tatgctgcgtttaaagggattgcagctgagaagcctcctgaaagcacagccacttttgga
gatggtggagacaagtacagtgctttccgtgaattagaacaaccatcagagagcaaatac
ttaggagataaccttgcagaattcaagcctgcaggaactgacgatggtttcacagatttt
aaaaccgctgacagtatctcaccattagagccacctgcaaaagacaaaannnnnnnnnnn
nnnnnnnnnnnnnnnnnnacatccttcccttctctgcccgttcagtccaaacagcaaaca
caagcaaagacctctttgaatctggcagacttggatctcttttcctctactggagaaaac
aagcagccgtcctttccgcctgcgtttaacacatccaaatcaggctcctttcctccaccg
ccccttccatctaccactgcccaaccagcagcacccagcaaaagttcgagcttagctgat
gactttggagagttcaacctttttggggaattttctaattgcgcatcagccagtggacaa
gatgattttgcggattttatggctttcaacaacagcagtgggttttccgaacaaaaacca
gacgacaaatacaatgcgcttaagcttgaggccgctcctcttcctcagtccggctcgtcg
accagcacagtgaagagcgggcagagttgtgctaccgctgctgcgcccaccaaatacgat
atcttcaaacagctttctctggaaggctctggagcaggctttgaggaggcgaaggacaac
acgctttcgtcggcgaagagcgacgatgattttgccgacttccactctaacaagttttct
tctgcgtgcggcagcggggataagtccctggtggacaaagtcgcagctttcaagcaggcc
aaagaagactcggcttcggtgaagtccctggatctcccttctattggtggcagcagtgtt
ggcaaggaggattctgaagacgcgttgtctgttcagtttgacatgaaactggctgatgtg
ggaggagatcttaagcatgtcatgtctgatagctctttggatttgccaacagttagtggc
cagcatccaccagcagcagatatagacgacttaaaatgtgccccatttggaagctataac
agcgggtctgcggtcagcagcctggcaagctatgactggtccgacaaagaagacattcat
cagggcaagaagttctcctcctttgtccagtcctcgggaagcggatcctccgcagccact
tctgtccttcagaagaaggagaccttgtttggcagctctgaaaacatcaccatgacaacg
gtttccaaagtgacaaccttttctagtgaggatgcttcacaggatgtttcctttgcagcc
tttgcaaactttaaagactctggcccgatacccagcggcccgagtgacgacgacattgga
gactttggcgattttgccagaccttcggcagaagcacaggatgcagcagctgatgcaaac
tcagaggcagatttccttgctagcggcgtctcttctgaactgcaaagggagtccacagat
gactttggagaattccaaagtgaaaagccaaaaatcagcaagttcgacttcttggtggca
acttcccaaggcaaagtgaagtcgagtgaagaaatgatcaagagcgaactggccaccttt
gacctgtctgtccaagggtctcataaaaggagcttaagcctaggtgaccgagaaataagt
cgctcttcacccttaccagttttggaacagccatttagagatcgttccaatactctaagt
gagaagcctgctttgcccgtcatcagggacaaatacaaagacttgactggggaagttgag
gaaagcgagaggtacgcctacgagtggcaaagatgcttggagagcgctctgcaagtcata
aagaaagcaaatgataccttaaatggaataagtagttcatccgtttgcactgaagttatc
cagtctgctcaaggcatggaatatttactaggggttgttgaagtctacagagtaacaaag
agagttgaactggggatcaaagcaaccgctgtctgtagtgagaaactccagcagctgctg
aaggatattgataaagtgtggaacaacctcatcagcttcatgtcactggctgctttaacg
ccagatgaaaactcactggatttctcttcttgtatgctgcggccggggatcaaaaatgcc
caagatcttgcctgtggcgtgtgcctcctgaacgtggattcaagaagtaaaaatgaagag
caacctgtggaagagcttcctagaaaagcctttaattcggaaatggataacttcaagctg
gcatacggagggcaccagtaccacgccagctgcgccaatttctggatcaactgtgtggag
ccgaaacctccgggtctcattttgccagacctgctctga
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