Apaloderma vittatum (bar-tailed trogon): 104275595
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Entry
104275595 CDS
T08559
Name
(RefSeq) LOW QUALITY PROTEIN: trinucleotide repeat-containing gene 6C protein-like
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104275595
03036 Chromosome and associated proteins [BR:
avit03036
]
104275595
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104275595
Chromosome and associated proteins [BR:
avit03036
]
Eukaryotic type
Gene silencing
piRNA pathway
104275595
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ago_hook
UBA_7
UBA
UBA_HERC2
UBA_Ucp12
UBA_NBR1_C
UBA2_UBAP-1
Motif
Other DBs
NCBI-GeneID:
104275595
NCBI-ProteinID:
XP_009869898
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MATGSAQGNFTGHTKKTNGNNGANGALVQSTSNQSALGAGGANGNGNSARVWGVAAGSSS
GLAHCSASAGDGKMDNMMGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVGA
GNPSSICSPVSAIGQNMGNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSVQPQNLN
TDGPNNTNPMNSSPNPINAMQTNGLPNWGMAVGMGAIIPPHLQGLPGANGTSVSQVSGGS
GEGMGSSVWGMSPGNPATGNGNSGFSQGNGDTVNSALSAKQNGSSSAVQKEGNGASAWDS
GPPSGPGVLAWGRGGGNGSGVGSMHSGXXXXXXSNGVNGEWGKPPNQHSNSDANGKGATG
WESSSVTSPNPAAQQGNEQMNSWAKAAASGTTASEGSNDSGGSQNEGSAGREGAGEGRRR
DKGMIDQGQVQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWGCA
ATQSSNSGGKNDGSIMNSTNTSSVSGWVNSPPAAVPTNTGWGDSNNKAPNGPGGWGESAS
STTVNNAAAAKSGHTWSGTANQEDKSPTWGEPQKPKSQNWGDGQKSNPSWTSGGGDWTDS
SSVPGHLGDGKKNGSGWDSDNRSGSGWNDSTRSGTSGWGNGTNSKANTGTSWGESLKPSP
QQNWANKPQDNNVSNWGGAASVKQTGSGWVGGPVPAKQKENCEATGWEEPSPPSIRRKME
IDDGTSAWGDPNYNNNKTVNMWDRNNPIIQSSTATSTTTTSTMISTNMGEPQPSHQSSAQ
PNRSPLLGPAGWGEMPTVHTKTEASWGEPSSPSSKSMQEGWGSGGDEVNLSTSQWEDEEG
DMWNNTASQESSSSCNSWGNAPKKGLQKGMKTSSKQDEAWIMNRLIKQLTDMGFPREPAE
EALKSNNMNLDQAMSALLEKKVEMDKRGMGVTDYNGMVTKPLGCRPPPISKESSMDRPTF
LDK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggctacagggagtgcccaaggcaacttcactggacatacaaagaaaactaatggcaat
aatggcgccaacggagcactcgtccaaagcacttctaaccagagtgcccttggagctggc
ggagccaacggcaacggcaactcggccagagtgtggggggtggctgcgggctccagctct
ggcctagctcactgctctgccagtgctggggatggaaagatggacaacatgatgggagac
gggagaagtcagaactgctggggtgcttccaactcaaatgctggcattaatcttaacctt
aaccctaatgccaatccagctgcctggcctgtacttggacacgaaggaactgtgggagca
ggcaacccttccagtatttgcagtccagtcagtgccataggtcagaacatgggcaaccag
aacgggaacccgacaggcaccttgggtgcttggggaaacttgctgccgcaagagagcaca
gaaccacaaacgtccacttctcagaatgtgtctttcagcgtacaacctcagaaccttaac
actgatggaccaaataacactaaccccatgaactcttcaccaaaccctatcaatgcaatg
cagacaaacggactgcccaactgggggatggctgttgggatgggggccatcatcccgccc
cacctgcaaggccttcctggtgctaacggaacatcggtttctcaagtcagcgggggcagt
ggtgaaggaatgggcagttcagtgtgggggatgtccccgggtaaccctgccacaggaaac
ggcaattctgggttcagtcaggggaatggagacactgtgaactcagcattaagtgctaaa
caaaacggatccagcagcgctgtgcaaaaggaaggaaacggagcgagcgcctgggattcg
gggcctccctcgggtcccggggtgctggcgtggggcaggggcggcggcaatggcagcggc
gttgggagcatgcattctggnnnnnnnnnnnnnnnnnnnagcaacggcgtcaacggtgaa
tggggcaagccccccaaccagcattccaatagcgacgccaatgggaagggagcgacaggg
tgggagagctctagtgttaccagtccgaatcctgccgcgcagcagggcaacgaacaaatg
aactcttgggccaaagctgcggcgtccggcaccacagctagcgaaggaagtaacgacagt
ggtgggagccaaaatgagggcagtgctgggagggagggggctggagagggaagaaggaga
gacaaagggatgatagaccaagggcaagttcagttgccaagaaatgaccttgaccccagg
gtcctgtccaatacggggtggggacagacccctgtaaagcaaaacactgcctgggaattt
gaagagtccccaaggtccgagcgaaagaatgacaatggaacagaggcctggggttgtgca
gctactcaatcttcaaactcaggggggaagaacgatgggtccatcatgaacagtacaaat
acctcttcagtatctgggtgggtcaactctccgccggcagctgttccaacaaatacaggt
tggggagacagtaacaacaaagcaccaaacggcccagggggatggggagagtcagcaagc
tctactactgttaataatgctgctgctgccaaaagcggccacacttggagtgggaccgcg
aatcaggaggacaaatcacctacctggggggagcctcagaaacccaaatctcaaaactgg
ggagatggacagaaatcaaatccaagctggacttcaggaggtggagactggacagattca
tcttctgttcccggacacttgggtgatgggaagaagaatggatctggatgggattctgac
aacaggtcaggctctggctggaacgattccacgaggtctgggaccagcgggtggggaaat
ggcacaaacagcaaggctaatacaggtacaagttggggggaatctttaaagccaagcccc
caacaaaattgggctaataaaccccaggacaacaatgtgagtaactggggaggagctgct
tctgtcaaacagacggggtcggggtgggttggtgggccagtgccagccaaacaaaaggag
aactgtgaggcaactggctgggaagagccatctccaccgtccattcgccgcaagatggag
atcgatgacggtacctcagcttggggcgacccaaattacaacaacaacaagactgtaaac
atgtgggatagaaataatcccatcattcagagcagtaccgcaaccagtaccaccaccacg
agcaccatgatcagcacgaacatgggtgaacctcagccgtcgcaccagtcaagtgcccag
ccgaaccggtccccgctgcttggtccagcaggctggggagaaatgcctactgtccacaca
aagaccgaagcttcgtggggagagccgtcgtccccttcttcaaaatctatgcaagaaggc
tggggcagtggtggggatgaagtgaatctcagtactagtcagtgggaagatgaagaagga
gatatgtggaataatactgcttcacaagagagcagctcctcctgtaattcctgggggaat
gccccgaagaaaggacttcaaaagggcatgaagacatctagcaagcaagatgaggcctgg
atcatgaaccgtctgatcaaacagctcacagacatgggcttccctagagagccagcggaa
gaggccttgaagagcaacaatatgaatctcgatcaggccatgagtgctctgctggaaaag
aaggtggaaatggacaagcgtggaatgggagtgaccgactataatggaatggtcaccaaa
ccccttggctgccgcccaccaccaatctccaaagagtcttccatggaccgccccaccttc
cttgacaag
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