Apaloderma vittatum (bar-tailed trogon): 104275603
Help
Entry
104275603 CDS
T08559
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104275603 (DDX1)
03016 Transfer RNA biogenesis [BR:
avit03016
]
104275603 (DDX1)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104275603 (DDX1)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104275603 (DDX1)
Transfer RNA biogenesis [BR:
avit03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104275603 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
104275603
NCBI-ProteinID:
XP_009869906
LinkDB
All DBs
Position
Unknown
AA seq
696 aa
AA seq
DB search
AAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAI
GSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFG
FGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRN
QALFAACVLKNAELKFNFGEEDFKFPPKDGYVGLCKAPDGSVVKSQHSGSAQVVQTQNLP
NAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVV
GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVI
VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVIVNPKADKLWERLGKNHI
RTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQ
YFIQQGGGPDRKGHQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGV
PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLK
EEGGCTIWYNEMQLLGEIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGH
VDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
gctgctgaaacagggagtggaaaaactggtgcttttagcattccagttatccagattgtt
tatgaaacgctgaaggaccagatggaaggcaagaaaggaaaagcaactattaaaactgga
ggggcagtgctcaataaatggcaaatgaacccgtatgatagaggatcagcttttgcaatt
ggctcagatggtttgtgttgtcagagcagagaggtaaaagaatggcatggatgcagagca
actagaggcgtgactaaagggaaatactactatgaagtttcctgtcatgaccaaggtttg
tgccgagttggttggtcaactatgcaggcttcactagatttgggaactgataaatttggc
tttggctttggtggcactggtaagaaatctcacaacaagcaatttgacagctatggtgag
gaattcactatgcatgatacaattgggtgttacctagacatagataaagggcaaataaaa
ttttccaaaaatgggaaggaccttggccttgcgtttgaaatcccaccacacataaggaac
caagcactttttgcagcttgtgtgctaaagaacgctgaattgaagttcaattttggtgaa
gaagatttcaagtttccaccaaaagatggctatgttggtctttgcaaggctcctgatggt
agtgttgtaaaatctcaacactcaggaagcgcacaagtggttcaaacacagaaccttcca
aatgctccaaaagcattgattgtagaaccatcaagagagctggcagaacaaactttgaac
aatgtgaagcagttcaaaaaatatgttgataatcccaaattaagggagctgttgattatt
ggaggggttgctgcaagagatcaactctctgtactggaacaaggagtggatattgttgtt
ggaactcctggaagactggatgacctggtttcaacaggaaagcttaatttatctcaagtt
agattcctggttctggatgaagctgatggccttctcctccaaggttattcagacttcata
aacaggatccacagtcaaattcctcagataacttcagatggaaagaggcttcaggtgatt
gtatgctctgcaacgctacattcttttgatgtgaaaaaactatccgaaaagatcatgcat
tttcccacctgggttgatttgaaaggagaagattctgttcccgaaactgtacaccatgta
gtggtgatcgtgaatccaaaagctgataaactgtgggaaagactcggcaagaatcatatt
agaactgatgaagtacatgcaaaagacaatacacggcctggtgctaacactccagaaatg
tggtctgaagctattaaaattctgaaaggagaatacactgttcgagcaatcaaagaacac
aagatggaccaagctattatcttctgcagaactaaaatagattgtgataatatggagcag
tacttcatccaacagggtggaggccctgataggaagggacatcagttctcatgtgtctgt
ctgcatggtgacagaaaacctcaagaaagaaagcaaaacctggaaagatttaagagagga
gatgtccgcttcttgatctgcactgatgttgctgccagaggaattgatattcatggtgtt
ccatatgttatcaacgttacgcttcctgatgaaaaacagaactacgttcatcgaattggg
agagtaggcagagcagagaggatgggtttagcaatctccctcgtggcgaaagagaaagaa
aaggtttggtatcatgtatgcagtagccgtggaaaaggatgttacaatactagactgaag
gaggaaggaggttgcaccatatggtacaatgagatgcagttgctgggggagattgaagaa
cacttaaactgcactattgcccaagttgagcccgacataaaagtaccagtagatgatttt
gatgggaaagttacatatgggcagaaaagagctctgggtggtggactgtataaaggccat
gtggatattctggcacctacagtacaagagttggctgcccttgaaaaggaggctcagaca
tctttcttgcatcttggctatcttcctaaccagctgttcagaacattctga
DBGET
integrated database retrieval system
