| Entry |
|
|---|
| Symbol |
DDX1
|
|---|
| Name |
(RefSeq) ATP-dependent RNA helicase DDX1
|
|---|
| KO |
|
|---|
| Organism |
avit Apaloderma vittatum (bar-tailed trogon)
|
|---|
| Brite |
KEGG Orthology (KO) [BR:avit00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:avit03041]
104275603 (DDX1)
03016 Transfer RNA biogenesis [BR:avit03016]
104275603 (DDX1)
Enzymes [BR:avit01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104275603 (DDX1)
Spliceosome [BR:avit03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104275603 (DDX1)
Transfer RNA biogenesis [BR:avit03016]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104275603 (DDX1)
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
696 aa
AAETGSGKTGAFSIPVIQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAI
GSDGLCCQSREVKEWHGCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFG
FGFGGTGKKSHNKQFDSYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRN
QALFAACVLKNAELKFNFGEEDFKFPPKDGYVGLCKAPDGSVVKSQHSGSAQVVQTQNLP
NAPKALIVEPSRELAEQTLNNVKQFKKYVDNPKLRELLIIGGVAARDQLSVLEQGVDIVV
GTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVI
VCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPETVHHVVVIVNPKADKLWERLGKNHI
RTDEVHAKDNTRPGANTPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQ
YFIQQGGGPDRKGHQFSCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGV
PYVINVTLPDEKQNYVHRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLK
EEGGCTIWYNEMQLLGEIEEHLNCTIAQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGH
VDILAPTVQELAALEKEAQTSFLHLGYLPNQLFRTF |
|---|
| NT seq |
2091 nt +upstreamnt +downstreamnt
gctgctgaaacagggagtggaaaaactggtgcttttagcattccagttatccagattgtt
tatgaaacgctgaaggaccagatggaaggcaagaaaggaaaagcaactattaaaactgga
ggggcagtgctcaataaatggcaaatgaacccgtatgatagaggatcagcttttgcaatt
ggctcagatggtttgtgttgtcagagcagagaggtaaaagaatggcatggatgcagagca
actagaggcgtgactaaagggaaatactactatgaagtttcctgtcatgaccaaggtttg
tgccgagttggttggtcaactatgcaggcttcactagatttgggaactgataaatttggc
tttggctttggtggcactggtaagaaatctcacaacaagcaatttgacagctatggtgag
gaattcactatgcatgatacaattgggtgttacctagacatagataaagggcaaataaaa
ttttccaaaaatgggaaggaccttggccttgcgtttgaaatcccaccacacataaggaac
caagcactttttgcagcttgtgtgctaaagaacgctgaattgaagttcaattttggtgaa
gaagatttcaagtttccaccaaaagatggctatgttggtctttgcaaggctcctgatggt
agtgttgtaaaatctcaacactcaggaagcgcacaagtggttcaaacacagaaccttcca
aatgctccaaaagcattgattgtagaaccatcaagagagctggcagaacaaactttgaac
aatgtgaagcagttcaaaaaatatgttgataatcccaaattaagggagctgttgattatt
ggaggggttgctgcaagagatcaactctctgtactggaacaaggagtggatattgttgtt
ggaactcctggaagactggatgacctggtttcaacaggaaagcttaatttatctcaagtt
agattcctggttctggatgaagctgatggccttctcctccaaggttattcagacttcata
aacaggatccacagtcaaattcctcagataacttcagatggaaagaggcttcaggtgatt
gtatgctctgcaacgctacattcttttgatgtgaaaaaactatccgaaaagatcatgcat
tttcccacctgggttgatttgaaaggagaagattctgttcccgaaactgtacaccatgta
gtggtgatcgtgaatccaaaagctgataaactgtgggaaagactcggcaagaatcatatt
agaactgatgaagtacatgcaaaagacaatacacggcctggtgctaacactccagaaatg
tggtctgaagctattaaaattctgaaaggagaatacactgttcgagcaatcaaagaacac
aagatggaccaagctattatcttctgcagaactaaaatagattgtgataatatggagcag
tacttcatccaacagggtggaggccctgataggaagggacatcagttctcatgtgtctgt
ctgcatggtgacagaaaacctcaagaaagaaagcaaaacctggaaagatttaagagagga
gatgtccgcttcttgatctgcactgatgttgctgccagaggaattgatattcatggtgtt
ccatatgttatcaacgttacgcttcctgatgaaaaacagaactacgttcatcgaattggg
agagtaggcagagcagagaggatgggtttagcaatctccctcgtggcgaaagagaaagaa
aaggtttggtatcatgtatgcagtagccgtggaaaaggatgttacaatactagactgaag
gaggaaggaggttgcaccatatggtacaatgagatgcagttgctgggggagattgaagaa
cacttaaactgcactattgcccaagttgagcccgacataaaagtaccagtagatgatttt
gatgggaaagttacatatgggcagaaaagagctctgggtggtggactgtataaaggccat
gtggatattctggcacctacagtacaagagttggctgcccttgaaaaggaggctcagaca
tctttcttgcatcttggctatcttcctaaccagctgttcagaacattctga |
|---|
