Apaloderma vittatum (bar-tailed trogon): 104276336
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Entry
104276336 CDS
T08559
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03440
Homologous recombination
avit03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104276336 (BLM)
03460 Fanconi anemia pathway
104276336 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
avit03032
]
104276336 (BLM)
03400 DNA repair and recombination proteins [BR:
avit03400
]
104276336 (BLM)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104276336 (BLM)
DNA replication proteins [BR:
avit03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104276336 (BLM)
DNA repair and recombination proteins [BR:
avit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
104276336 (BLM)
Bloom's syndrome complex (BTR)
104276336 (BLM)
FA (Fanconi anemia) pathway
104276336 (BLM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ_Zn_bind
Helicase_C
BDHCT
HRDC
RQC
BDHCT_assoc
ResIII
UCC1_N
Motif
Other DBs
NCBI-GeneID:
104276336
NCBI-ProteinID:
XP_009870914
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MGEICRLVDAIPLRELTSLSCGMELLRQRDLRRKLLANSVTLSKTCVERGPPACHSPALP
SGPNWSFSSDRNSPKPTSLLLGTVRSSSFSTKNPQALDTSYTSKQRSEGMGCPSSSEAGG
KAGGSPGLSAGGSGHLLARPLASAAPRAQSRAATGLPAENGLGRNGTDFDLDHLNIDDFD
EGWEDSVNVSAPEARPSCQPVREGPPTTSLLSKIMSRAEGSAALSSPAALKSSFSMATKN
RSDLLVNNPALERFRGMKFPHSEEMMAVFHRKFGLHSFRTNQLEAINAALLGEDCFILMP
TGGGKSLCYQLPACVSAGVTIVISPLRSLIIDQVQKLNTLDIAATYLTGDRTDTDASKIY
MQMSKKDPVIKLLYVTPEKICASGRLMSALENLYDRKLLARFVIDEAHCVSQWGHDFRQD
YKRLNMLRKKFRSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKK
PKKVAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDANRDLV
QKKWINQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEMSHCL
LFYSYSDVTRLRRLIMMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDF
NPNFCKDHPEVTCDNCSRKKDYKSRNVTDEVKSIIRFVQEHCGQMRRTSAKKNTGSGRYT
LNMMVDIFLGKTSAKIQSGIFGKGSAYSRHNIERLFRKLVLDKILDEDLYITANDQAVAY
VTLGERAQAVLGGSLQVEFHETESASAIRKQRASLAKMSQREEMVKKCLGELTDMCKTLG
KVFDVHYFNIFSTSTLKKIAETLSSDVEVLLQIDGVTEDKLEKYGAEIIKVMDKYSEWTT
PDDATCQSGDTATGGMSTPERDEEAEDVVTTSSYFCNNANQRRKRKRPPNFRESKRKKTC
SGGSQQFRPKGSRYRRTKGAAGSRAPASSGYRAAGKLGIMAPPKPRNRQFLQPSYSIV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagatctgcaggctggtggatgccatcccgctgcgcgagctgacctccctgtcc
tgcgggatggagctcctgcggcagcgggacctcaggagaaaattgctggctaattctgtc
actttgagcaaaacctgtgtggagcggggccctcctgcctgtcacagtcccgctctgcct
tctggccccaactggagcttcagttctgacagaaactcgcccaaacccaccagcctcttg
cttgggactgttcgttcaagcagtttttcaaccaaaaacccccaagccttggacacctct
tacacttcgaagcaaagaagcgagggaatgggctgcccgtcatcgtctgaggctggtggc
aaagcgggaggttcccccgggctgagcgctggtgggagcgggcacctgctggcgaggccc
ctggccagcgcggctccgagagctcagagcagggcggccactggccttcccgcagaaaac
ggtttgggtaggaatgggacggactttgacctcgatcacttgaatatcgacgattttgac
gagggctgggaggattcagtgaacgtttcggcacctgaggcgcggccgtcgtgccagccc
gtgcgggaagggccgcccaccacatcgctgctctccaagataatgtccagagccgaagga
tctgctgctctgtcgagtcctgctgctctgaaatcaagcttctcaatggcaacaaagaac
cgttctgatctgctggttaataaccctgcactagaacgtttcagaggtatgaaatttccc
cattctgaagaaatgatggctgtatttcacagaaagttcggtttgcacagttttcggaca
aatcagctggaggccatcaacgccgctcttctgggggaagattgcttcatcctgatgccc
accggtgggggtaaaagcttgtgctaccagctgccagcgtgcgtctccgctggagtcact
attgttatctctccgctgaggtcgttgataatagatcaggttcagaagctgaacacctta
gatattgctgcaacgtacctgaccggtgacagaacagatactgatgcttccaaaatatat
atgcaaatgtcaaaaaaagatcctgtaataaagcttctgtatgttacccctgagaagatt
tgtgcaagcggccgcctgatgtcagcgctggaaaacctctacgacaggaaactcctggcg
cgttttgtcatcgatgaggcccactgtgtcagccagtggggccacgattttcgacaagac
tacaagcgactgaacatgctccgcaagaagtttcgctccgttcctatgatggctctcact
gccactgctaacccccgagtgcagaaggatattcagaaccagcttgagatgctaaagcca
caagtgtttacgatgagcttcaacagacataacttgaaatacgatgtattgcccaagaag
ccgaagaaggtggcaatggattgcttggaatggattaagaaatatcatccacatgactct
ggaataatttattgcctttcacgtcacgaatgtgacacaacagcagctattctgcagaag
gaaggtcttgctgcgcttgcctaccacgctggcctcactgacgccaacagagatctggta
cagaagaagtggattaatcaggaaggttgccaggttatatgtgccaccattgcctttgga
atgggcatcgacaaacctgacgtgcgctatgttatccacgcttctcttcccaagtctgtg
gaaggttactaccaagaatctggcagagctggacgagatggtgaaatgtctcactgcctg
ctcttctatagctacagcgacgtgaccagactgaggaggctgatcatgatggagaaagat
ggaaacagtcacacaagacagacgcactttaacaacctgtacagtatggttcactactgt
gagaacgtcgttgactgccggaggattcagcttttggcctacttcggggaaacagacttt
aatcccaacttctgtaaagatcacccagaagtaacttgcgataactgcagtagaaagaag
gattacaaatcgagaaatgtaacagatgaagtgaagagcattatcagatttgtacaagag
cattgtgggcaaatgagacggacaagtgcaaagaaaaatacaggttctggaagatacacg
ttgaatatgatggtggacattttcttaggtaaaacgagcgccaagattcagtctgggata
tttgggaaggggtctgcctactccaggcacaacattgaaaggttgtttagaaagctggtc
ttggacaagattctggacgaagacttgtacatcacagctaacgaccaggcggttgcatac
gtaacgctgggggagagagctcaggctgtgcttggtggatcactacaggtggagtttcac
gaaacggaaagcgccagcgccatcaggaagcaaagggcttccttggcaaagatgtcacag
cgggaagagatggttaagaagtgcctgggggaacttacagacatgtgcaaaacgcttggg
aaagtgttcgacgtgcattacttcaatattttcagtacttcaacgctgaagaaaatcgca
gaaactttgtcctctgatgtggaggttctgctgcagattgatggtgtcacagaagacaaa
ctggaaaaatacggtgcagaaataattaaagtgatggataagtactctgagtggaccaca
ccagatgatgccacctgccagagcggggacacagctacgggaggcatgagcacccctgag
cgcgatgaagaggcagaagatgtagttacgacctcgagctatttttgcaataatgccaac
caaagaagaaagaggaaaaggccgccaaacttcagagaatcaaagaggaaaaagacgtgt
agtggtggcagccagcagtttcggcccaaagggagtcggtaccgaaggaccaaaggtgcg
gccggctcgcgggctccggcttcctcgggctacagagctgctggaaagctgggcatcatg
gccccgccgaaacccaggaacagacaattcctccagccttcctattccatagtgtag
DBGET
integrated database retrieval system
