Apaloderma vittatum (bar-tailed trogon): 104276393 Help Entry 104276393         CDS       T08559                                  Symbol RAD50 Name (RefSeq) DNA repair protein RAD50   KO K10866   DNA repair protein RAD50 [EC:3.6.-.-] Organism avit  Apaloderma vittatum (bar-tailed trogon) Pathway avit03440   Homologous recombination avit03450   Non-homologous end-joining avit04218   Cellular senescence Brite KEGG Orthology (KO) [BR:avit00001]  09120 Genetic Information Processing   09124 Replication and repair    03440 Homologous recombination     104276393 (RAD50)    03450 Non-homologous end-joining     104276393 (RAD50)  09140 Cellular Processes   09143 Cell growth and death    04218 Cellular senescence     104276393 (RAD50)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:avit03032]     104276393 (RAD50)    03400 DNA repair and recombination proteins [BR:avit03400]     104276393 (RAD50) DNA replication proteins [BR:avit03032]  Eukaryotic type   DNA Replication Termination Factors    MRN complex     104276393 (RAD50) DNA repair and recombination proteins [BR:avit03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     MRN(MRX) complex      104276393 (RAD50)     BRCA1-C complex      104276393 (RAD50)    NHEJ (non-homologous end-joining)     MRX complex      104276393 (RAD50) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_23 Rad50_zn_hook SMC_N AAA_21 AAA_15 SbcC_Walker_B ABC_tran DUF2703 AAA_29 AAA_24 AAA_22 AAA_13 Motif Other DBs NCBI-GeneID:  104276393 NCBI-ProteinID:  XP_009870991 LinkDB All DBs Position Unknown AA seq 1312 aa AA seqDB search MSKIEKMSILGVRSFGVEDKDKQVITFFSPLTILVGPNGAGKTTIIECLKYITTGDFPPG TKGNSFVHDPKVANETDVRAQIRLQFRDVNRELLAVQRSMVCTQKGKKTEFKTLEAVITR IKHGEKVSVSSKCAEIDREMISALGVSKAVINNVIFCHQEESNWPLSEGKALKQKFDEIF SATRYIKALETLRQVRQKQGGKVKECQIELQYLKQNKEKAREIQDHLNNREAQLAASKEN VKSIESQLDPLKSSLAEVEQNLTKVLRLDNDVKALESRKRQMEKDNQDLQQKMEKVFQGT FEQLRDRYENHQRTVKEKEKRLLDCRRELDRSTKECQRFNSEKSELLIERGRLQLQADRH QEHIAVRDSLIQSLAAQLELDGFERAPFNERHVTSFHRLLKEKQERDTEAANNLMREFAR KEAMKQKQIDEIRDKKTGLERTIDLKSDIQNKKQVELKNVRYELQQLEGFSDRILELEQE IDKTERELEKAERSSNVETLELEVQTLQNEKINLDKALRKLDQEMEQLNLHTTTITQMDM LKKDKADKEEQIRKVKSRHSEELTSLLGYFPNKNQLEDWLHDKNKEINQTRDNLADLNKR LASVEYQKTYVTNELKKKEAQLSLHETKLFDVCGSQDFDSDLNKLQDEIEKSSKQRAVLA GATAVYSQFITQLTEENQSCCPVCQRVFQTEAELQDVISDLQSKLRLAPDKLKSTETELK RKEKKRDEMMSLKPLRRTVVELQEKDIPDLRNKIQNANRDLTALKGEIEEQESVLQTALS KEEGAKARLQDITLMERYQTDIRDVERKIAQQEAKLLGVDLSRTVLQVSHEKQEKKHLWD TVTGKIELNQKLKQDQQNQIQQLKSAVNELKAEKLQISSSMQRRRQLEEQTVELTTEVQS LCREIKEAKEQVFPLDATLEKLQQEKEDLVNKRTASNKETQEKINGIKEKVKDINKYMKE IESYIQQGRDDYKKQKESELDEVNSQLAACEKQKEKISKEMETIRQDIDTQKVQERWLED NLTLRKRNEELKGVEDDIKRLMKEMGEMKVPQMKNEQKHLEEKIESLKRNHHVALGRQHG FEEEIVRFKKELRDPQFRDAEEKYREMMIVMRTTELVNKDLDLYYKALDKAIMTFHSMKM EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRSYNYRVVMIKGDTALDMRGR CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR NFQLLVITHDEDFVELLGRSEYVETFYRIKKNVDQCSEIMKCSVSSLGSYVH NT seq 3939 nt NT seq  +upstreamnt  +downstreamnt atgtcgaagatcgagaaaatgagcatcctcggagtgaggagttttggggtagaggataaa gacaagcaagtcatcactttctttagccccttaactattttggtgggaccgaatggggcg gggaaaacgacgatcattgaatgtcttaaatatataaccactggagattttcctcctggg accaaaggaaactcatttgttcacgatccaaaggttgccaatgaaacagatgttagagct cagattcggttacagtttcgagatgtaaacagagagctcctagctgtccagcgatccatg gtctgtacgcagaagggcaagaaaacagaatttaaaacacttgaagctgtcattactagg ataaagcatggcgagaaggtcagcgtgagctccaagtgcgccgaaatcgatcgggagatg atcagcgcccttggtgtttccaaagctgtgattaacaacgtcattttctgccaccaagaa gaatccaactggccattaagtgaagggaaggccctgaaacaaaaatttgatgagatcttt tcagcaacaaggtatattaaagcacttgaaactctccgtcaggtgcgacagaagcaaggc gggaaggtaaaagagtgtcagatagaactgcaatacctaaaacagaataaagaaaaagca cgggaaattcaggatcatcttaacaatagagaggctcaactggctgcttcgaaggagaat gtaaaatctattgagagtcagcttgatcctctaaagagttctctggcagaggttgaacag aatctcacgaaagtactgaggctggacaacgatgtgaaagccctggagagcaggaagaga cagatggagaaggataatcaagatttgcaacagaagatggaaaaggtttttcaaggaact tttgagcaactgagggatagatacgagaaccaccagagaacagtgaaggagaaggagaaa agattgttagactgcaggcgtgaattagacagatccactaaagagtgccagagatttaac agtgagaaatcagaactgcttattgaacgaggtcgtcttcagctgcaggcggatcgtcac caggagcacatcgcagtgagggattcgttaattcagtctctggcagcacagctggaatta gatggctttgagcgagcaccttttaatgaaaggcacgttaccagttttcacaggttgttg aaggagaaacaggaaagagatacagaggctgcaaataatttgatgagagaatttgcccga aaagaagcaatgaagcaaaaacagatagatgaaatcagagacaagaaaactggtttagaa agaaccattgacctgaagtcagacattcaaaataagaaacaagttgagctcaagaatgta agatatgaattgcagcagctggaggggttttcagacagaattctggagctggaacaggag attgacaagacggaacgtgagctggagaaggctgagaggagcagcaacgtggaaaccctc gagctggaagtacagactctgcaaaatgagaaaataaacctggataaggctcttaggaaa ttggatcaagagatggaacagctgaatctacatactacgacaattacccaaatggacatg ctgaagaaagacaaagcagacaaagaagagcagattagaaaagtaaaatcaaggcattct gaggaactgacatcactgttgggatattttccaaataaaaaccaacttgaagactggctc catgataaaaataaagagattaatcagacaagggataatcttgctgaccttaacaaacgg ctggcgtcagtagaatatcagaaaacttacgtcactaacgagctaaaaaaaaaagaagca cagctgtcccttcatgaaacaaagctttttgatgtttgtggaagccaagattttgacagt gatctgaacaaacttcaagatgaaatcgaaaaaagttctaaacagcgagctgtgcttgcc ggtgccactgcggtttattcgcagttcattacgcaactgacggaggagaaccagtcgtgt tgtccagtttgtcagagagtttttcagacagaggccgaactgcaagacgtaattagcgat ctgcagtccaagctacgtctggctccggacaagctgaagtcaacagagactgaacttaaa agaaaagagaaaaaacgtgatgaaatgatgagtcttaaaccactcaggcgaactgtagtt gaactccaggaaaaggacataccagacttgaggaacaagatacagaacgccaacagggat ttaacggccctgaaaggtgaaatagaagaacaagaatcagtcttgcagacagctttgtca aaggaggaaggtgccaaggcccgtttacaggatataacactaatggaaaggtaccagact gatattagggatgttgaacgaaaaattgctcagcaggaggctaagctgcttggggttgat ttaagtagaaccgttctacaagtaagccatgagaaacaagagaaaaaacacttgtgggat acagttactggtaaaattgagctaaatcaaaaactcaagcaagaccagcaaaatcaaatt cagcagctaaagagtgcagttaatgagcttaaagcggagaaacttcagatttcaagcagc atgcagcgacgtcgacaactggaggaacaaacagtggaattaaccactgaggttcaatcc ttgtgcagagagatcaaggaagcaaaagaacaggtgtttcctttggatgcaactttagaa aaactgcagcaggagaaggaggatctagtgaacaaacggactgcgagtaataaagaaaca caagagaagataaatggcataaaagagaaagttaaggatataaacaagtacatgaaggaa atcgaaagctatattcaacaaggaagagatgactataaaaagcaaaaggagtctgagctt gatgaagtcaattctcagttggctgcctgtgagaagcagaaggaaaagataagtaaagag atggaaaccattcgacaagatattgatactcaaaaggtacaggagaggtggctggaggat aatcttactttgaggaaacggaacgaagagctcaaaggagttgaagatgatatcaaacgc cttatgaaggagatgggagaaatgaaagtcccgcagatgaaaaatgagcaaaaacactta gaggagaaaatagaatctctgaaaagaaaccatcatgtggcactcggccgacaacatgga ttcgaggaagagattgttcggtttaaaaaggaacttcgagacccgcaattcagagacgca gaggaaaaatacagggagatgatgatcgttatgagaacaacagagctggtgaacaaagat ctggacctttattacaaggctctcgataaagcgatcatgacatttcatagcatgaagatg gaagaaatcaacaaaataattcgtgacctttggcgaaacacctacagaggacaagacatt gaatatatagaaatccgttctgatgcagatgagaacgtctcagcctctgataaaagaaga agctacaattacagagtagtcatgataaagggcgacacggcgctcgatatgcgaggacga tgcagtgctgggcaaaaggtccttgcttctcttattatccgtcttgctttggcagaaacg ttctgtctcaactgcggcatcttggcactagatgagcctaccaccaacctcgatcgagaa aacatcgagtctcttgcccatgccctggtggagataataaaaagccgctcccagcagcgt aactttcagcttctggtcataactcacgatgaagattttgtggaacttctgggccgttcg gaatatgtggaaacgttctacaggataaagaagaacgttgaccagtgctccgagataatg aaatgcagcgtgagctccctcggatcatatgtacattag

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