Apaloderma vittatum (bar-tailed trogon): 104276452
Help
Entry
104276452 CDS
T08559
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03013
Nucleocytoplasmic transport
avit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104276452 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
104276452 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
avit03019
]
104276452 (THOC5)
03041 Spliceosome [BR:
avit03041
]
104276452 (THOC5)
Messenger RNA biogenesis [BR:
avit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104276452 (THOC5)
Spliceosome [BR:
avit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104276452 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
104276452
NCBI-ProteinID:
XP_009871067
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
DVRYYSEECEVDLRDPIKDYELYRETCQELQRLMAEIQELKSRGIKDNASEIDERRIQSC
VHFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKS
KHEEIELVSLEEFYREAPPEISRPAITLAEPHQQTLARLDWELEQRKRLAEKYKECLTSK
EKILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLF
VQASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQ
LDDKRKEMLKRHPLSVTVDLKCKDDNVLHLTFYYLMNLNVMTVKAKVTTAVEMTTAISAG
DLLSPDSILNCLYPGDHGRKTPNPANQFQFDKVGILTLSDYVTELGHPYVWVQKLGGLHF
PKDQPQQSRLALHKQFASLEHGVVPVSSECQHLFPTKIVSRLVKWAAIPFEDYAELPYTK
DVIEAGLAEDTHLYYMALIERGTAKLQAAVVVNPGYSTLPPIFSLCLNWKGERTGSNDDN
IRAMESEVNVEYKELWGPKPGYQLLTNQLQRLCMVLDVYLETEPHDPSVEGPKEFPQEKM
CLRLVRGPLRLKPFKFNYPQGFFSHR
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
gatgttaggtactacagcgaggagtgcgaggtggatctccgtgaccctatcaaagactac
gaactctacagagagacttgccaagagcttcagaggctcatggcagaaatccaggagctg
aagagcagaggcatcaaggacaacgcatctgagatagacgagcggcgcattcagagctgc
gtccacttcatgaccctgaagaagctcaaccggctggctcatattcggctgaagaaaggg
agagaccaaacccacgaggcaaagcagaaggttgatgcgtatcacctgcagctccagaac
ctgctctatgaggtgatgcacctgcagaaagagatcaccaagtgcctggagttcaagtca
aaacacgaggagatcgaactggtgagcctggaggagttttacagagaggcccctcccgaa
atcagccggcctgccatcaccctggctgaacctcaccagcagaccctggcccgtctggac
tgggagctggagcagcgcaagaggctggcagagaagtacaaggagtgcctgaccagcaag
gagaagatcctgaaggagattgaggtgaagaaggagtatctgagcagcctccagcctcga
ctcaacagcatcatgcaggcctccctgcctgtccaggagtatctcttcatgcctttcgac
caggcgcacaaacagtatgagacagcccgacacctcccgccgcctctctacgttctcttc
gtccaagccagcgcctacggtcaggcctgcgataagaagcttgtggtggccatcgaaggg
agcgtagaggaagccaaagccctgtacaagccacctgaggactcgcaggatgacgaaagc
gattccgatgcagaggaggagcagaccacgaagcggcgcaggcccaccctgggcgtgcag
ctggatgacaagcgcaaggagatgctcaagcgacaccccttgtctgtcaccgttgacctg
aagtgcaaagacgacaatgtgcttcacctgaccttctactacctgatgaacctcaacgtc
atgacggtgaaagccaaggtgaccactgctgttgagatgacaacggccatcagtgccggc
gacctgctctccccggactccatcctcaactgcctctatccaggagaccatggcaggaaa
acacccaacccggccaaccagttccagtttgataaagtgggcatcctgaccttgagtgac
tacgtgacagagctggggcacccctatgtgtgggtgcagaagctgggcggcctgcatttc
cccaaggatcagcctcagcagtctcgcttggctctgcacaagcagtttgcctcgctggag
cacggcgtcgtgccagtctccagcgagtgccagcatctcttccctaccaagatagtctca
cgcctggtgaagtgggctgccattcccttcgaggattacgcggagctgccctacactaaa
gatgtgatcgaggccggcttagctgaagacactcacctctactacatggccctgatcgaa
aggggaacagccaagctccaggcagctgtggtggtgaaccccggttattccacgctgcca
cccatcttcagcctgtgcctcaactggaagggagagcgaaccggcagcaacgatgacaac
attcgggccatggagagcgaggtcaacgtggagtacaaggagctgtgggggcccaaaccg
ggctaccagctcctcaccaaccagctgcagcggctgtgcatggtgctggacgtctacctg
gagacggaaccccatgaccccagcgtggaggggcccaaggagtttcctcaggagaaaatg
tgtctgcgcctggtcaggggacccttgcgtctgaagcccttcaagttcaactatcctcag
gggttcttcagccaccgctaa
DBGET
integrated database retrieval system
