Apaloderma vittatum (bar-tailed trogon): 104276476
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Entry
104276476 CDS
T08559
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
avit03000
]
104276476 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
avit04147
]
104276476 (IRF6)
Transcription factors [BR:
avit03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
104276476 (IRF6)
Exosome [BR:
avit04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104276476 (IRF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
104276476
NCBI-ProteinID:
XP_009871105
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All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQ
GSIINPGSTGSAPWDEKDNDLDDEEEEELNQSQHVPIQETFPFLNINDSPMAPASAQNCS
PEAVWPKNEPLDMEMPPPALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTTTVSNP
QGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNERQKIFTSRLLDVMDRGLILEV
SGHAIYAVRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQ
PPYEIYFCFGEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTP
DIKDNIVAHLKQLYRLLQNHQEGWPMPXXXXRARPPPSPCRSHSLPSDRPRVLLWGLSPC
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacacccgcgcagagttcgcttgaagccatggctggtagcccaggtagacagt
ggtatgtatcccggccttatctggctaaaccgagaagcgaagcggtttcagatcccctgg
aagcacgcaactcggcacagcccgcagcacgaggaggagaacaccatcttcaaggcatgg
gctgtggaaacaggaaagtaccaggaaggagtcgatgagccagaccctgcaaagtggaaa
gcccagctccgatgtgctcttaacaaaagccgggaatttaatttgatgtatgatggcacc
aaggaggtgcccatgaatcctattaaaatttatgaagtgtgcgatatcccgcagtcccag
ggatcaatcattaatccaggttccactggctcagctccgtgggatgaaaaggataatgat
cttgatgatgaagaggaggaggaattgaatcaatcccagcatgtccctattcaagagaca
tttccatttcttaatatcaatgattctcccatggctccagccagtgcacaaaattgcagc
cctgaagctgtgtggccaaagaatgaacctctagatatggaaatgcccccacctgcgctg
cagcatgacttcttcagcagccctgagctctggatcagctctctgccaatgacagactta
gaaatcaagtttgaatatcgaggaaaggagactgggccgacaacgactgtaagcaaccca
cagggatgcagacttttctacggagagctgggtccaatgccagaccaggaagagctcttt
gggcctattagtttggagcaagtaaagtttccaggaacagagcaaatcaccaatgaaagg
cagaagatcttcacaagtcggctgctggatgttatggacaggggactgatcctggaggtc
agtggccatgccatctacgctgtccggctctgccagtgcaaggtgtactggtctggtccc
tgcgcgccttcctccaccacaccaaatttgatcgagaggcaaaagaaagtcaaactcttc
tgtctggaaacattcctaagtgagctgattgcccatcagaaaggacaaattgagaaacag
ccaccatatgagatctacttctgttttggagaagaatggcctgatggcaaacccagggag
aggaagctgattgtggttcaggtcattccagttgtggcccggatgatctacgaaatgttt
tcgggtgactttacgcgctcctttgacagcggcagtgtccgactccagatctccacgccg
gacatcaaggacaacatcgtggctcacctgaagcagctctaccggctgctgcagaaccac
caggaggggtggcccatgccgnnnnnnnnnnnncgtgcacgacccccgccttccccctgc
cgcagccactccctgcccagtgacagaccccgcgtgttgctctggggattatcgccttgt
acataa
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