Apaloderma vittatum (bar-tailed trogon): 104276505 Help Entry 104276505         CDS       T08559                                  Symbol DHX8 Name (RefSeq) ATP-dependent RNA helicase DHX8   KO K12818   ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6] Organism avit  Apaloderma vittatum (bar-tailed trogon) Pathway avit03040   Spliceosome Brite KEGG Orthology (KO) [BR:avit00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104276505 (DHX8)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:avit03041]     104276505 (DHX8) Enzymes [BR:avit01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      104276505 (DHX8) Spliceosome [BR:avit03041]  Complex C   Other components    Step II factors     104276505 (DHX8) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  OB_NTP_bind HA2_C S1 Helicase_C HA2_N DEAD AAA_22 AAA_19 nSTAND3 Flavi_DEAD PRP38_assoc T2SSE PhoH TsaE AAA_16 ABC_tran Sigma54_activ_2 OB_RRP5_4th Transformer Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  104276505 NCBI-ProteinID:  XP_009871159 LinkDB All DBs Position Unknown AA seq 1113 aa AA seqDB search MRPPPKPSTSKETAAKPKSEKERLKELFPALCRPDNPNIRNMLDEDDVKVAADALKELEA LMPSADRQGKQRSSDHRAKKRRKSRSRSRDRKRRHRSRSRSRSRTWDKNRGKSRYRSRSR SRSPSRDRKDREKYVEKSSERWRDKHIDRPPPEEPSIGDIYNGKVTSIMQFGCFVQLEGL RKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQDSGEDLN PNRRRNLIGETSEETSMRNPDRPSHLSLVNAPEVEDDSLERKRLTRISDPEKWEIKQMIA ANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKN PDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNTHWVDPLPDVDGRQIAANMRG IGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIFRLKEQLIQAVHDNQILIVI GETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIR FEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQK RQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQI HLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDP APPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQR AGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMD APPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLT IVSMLSVQNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFI QARSLRRAQDIRKQMLGIMDRHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTL IDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPT KLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR NT seq 3342 nt NT seq  +upstreamnt  +downstreamnt atgcggcctccaccaaaaccatctacaagcaaagagacagctgcaaaacccaagtctgag aaggaaaggttaaaggaattgtttccagccctctgcaggccagacaatcccaacatcagg aatatgctggatgaagatgatgtgaaagtggcagctgatgcacttaaagagcttgaagct ctgatgcccagtgcagacaggcaaggcaagcaaaggagcagtgaccaccgggcaaagaaa aggaggaagagccgaagtcgtagcagagacaggaaacgaaggcacagatctcgctctagg tctcgttctaggacttgggataagaacaggggaaaatccagataccgatcaagaagcaga agtcggagtcccagtagggaccgtaaggatcgagagaaatatgtcgagaagagcagtgag agatggagagacaagcacatagaccgcccaccacctgaggagccttccattggagacatt tacaatggcaaagtcacaagtataatgcaatttggatgctttgtgcagctggaaggacta aggaagcgctgggagggcttggtccacatctcagagcttcgaagagaaggccgcgttgcc aatgttgccgatgttgtgagcaaaggacaaagagtaaaagtcaaagtgttatcctttact ggatccaaaaccagcctgagcatgaaggatgttgatcaagactctggggaagacttgaac ccaaaccggaggcgaaatctcattggagaaaccagcgaagaaacctctatgagaaacccc gacagacccagtcacctgtccctggtgaatgccccagaggtggaggatgatagccttgaa aggaaacgcctcaccagaatttcagacccagagaaatgggaaataaaacagatgattgcg gctaacgtgctttccaaagaagagtttcctgattttgatgaggagactggaattcttcct aaagttgatgatgaagaagatgaggaccttgagattgagttagttgaagaagagccacca ttccttcgaggtcatactaaacagagcatggatatgagtcctatcaaaatagtaaagaat ccagatggttccttgtcccaggctgcaatgatgcagagtgctttagctaaggaaagacga gagcttaaacaagcccagagagaagcagagatggattctatccccatgggactcaacaca cactgggtggatcctctccctgatgtggatggaagacaaatagctgcgaacatgcgaggt attggcatgatgcccaatgacatcccagagtggaagaagcatgcgtttggtggcaacaaa gcttcttatggtaagaaaacccagctttccatcattgagcagagagagagtcttccaatc ttcagactgaaggagcagctgatacaggccgtgcatgacaaccagattctgattgttatt ggagagacgggatctgggaagacaacgcagattactcaatacctggctgaggcaggctat acatcaagaggaaagattggatgtactcagcctcgcagagtggccgcaatgtctgttgca aagagggtgtcagaggaattcggttgctgcttgggacaagaggttggctacaccattcga ttcgaagactgcactagccccgaaactgttatcaaatacatgacagatggcatgttactg agggagtgcttgatagaccccgatctgacccagtatgccattatcatgttggacgaagcc cacgagaggaccatacatacggatgttctctttggactcctgaagaagacggtgcagaaa cggcaggatatgaagttgatagtgacatcagcaacactggatgctgtgaaattctctcag tatttctacgaagcaccaatcttcactattcctggcagaacatacccagtagaaatactg tacacaaaagagccagagacagattatttggatgctagtctgattacggtaatgcagatc cacttaacagagccaccaggtgacattttagtgtttctcactggtcaggaagagattgac actgcctgtgaaatcctgtatgagaggatgaagtctttaggacctgatgttccagagtta attatcctgccagtatattcagctttacccagtgaaatgcaaaccaggatttttgaccca gccccaccaggaagcagaaaggttgtcattgccactaacattgctgagacgtctttgact attgatggaatctattatgtagttgatcctggctttgtgaagcagaaagtttacaactcc aagactggaattgaccagctggttgttacaccgatttcacaggctcaagcaaagcagcga gccggaagggctgggagaactggaccaggaaaatgctatagattatatacagagcgtgcg tatcgagatgaaatgctaacaaccaatgtgcctgaaatccaaagaacaaatctggccagc acggtgctttctctgaaggctatgggcatcaatgatttgctctcctttgacttcatggat gctcctccaatggaaactctcataactgccatggagcagctgtacactctgggagctctg gatgatgaaggactgctcacacgacttgggcgcaggatggcagagttccccttggagcct atgttatgtaagatgttgatcatgtctgtacatctgggatgcagtgaggaaatgctgaca attgtctctatgctgtctgtgcagaacgtgttctacaggccaaaggataaacaagcactt gctgatcaaaagaaagccaagttccatcagacagaaggtgaccacctcactttgctggct gtgtacaattcgtggaagaataataagttttcaaatccctggtgctatgaaaattttatc caggcccgatccttacgcagggcacaggatatccgcaagcagatgttaggcattatggac aggcacaagctggatgttgtatcctgcgggaaggcaacagttcgagtccagaaggccatc tgtagcggcttcttccgaaatgcagcaaagaaggatccccaggaaggctatcggacactc attgaccaacaagtagtctatatccacccttccagtgcccttttcaacaggcagccagag tgggtggtgtatcacgaactggtgcttaccaccaaggagtacatgcgtgaagtgacgact attgatcctcgctggctggtggagtttgcaccagctttcttcaaggtttctgatccaacc aagttgagcaaacagaaaaagcagcagcggctggaacccctgtacaatcggtatgaggag cccaatgcttggaggatatcacgagcattcagacggcggtga

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