Apaloderma vittatum (bar-tailed trogon): 104276581
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Entry
104276581 CDS
T08559
Symbol
TTF2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
avit03021
]
104276581 (TTF2)
Transcription machinery [BR:
avit03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104276581 (TTF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF5703_N
Ig_TMEM132_6th
Motif
Other DBs
NCBI-GeneID:
104276581
NCBI-ProteinID:
XP_009871258
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
IPASHCLTHEGCLVELQVXXXQQDGDEYQLFYRCLKSKLNGKKWCGSIPWQDPKATKVSK
ALESQPSTAPLFNPSGQRNPFKVIDKNCEQSSWKQIKQGNGEKTEAKGVKAEKESVLMSH
REKKSTSDSAIEKEPLERLKTKMKPSMEKSDPELKESTVPESKLGLSESGKGEDTLWEEE
KCDGVTRESKKSSECVEKELDGRSKLISLHLEKQSTEEEQPRDETLKSCGVKETREREYT
GHKNGEMKLISEEDVISSAAPQSALQHAALKGGAEAVLPKTRIRPGLGQPAEEISGSDSD
EIGFVCSSLGKSKAEGLQSREIPSGKSGKKXQETSLLGTAALHHMERPQDPKALHNHLVV
QLKQKKSTLATVNIQLLPDKGERLLKQVQDLEAAVSALNISTADTVGKGEDSPSSSCPEE
SFPNPFDRPGGTKLIPLPLQDPAARTSSGSHSYPSAAATLASSEYYGCNFGMNSGVQNLY
GGRMTEDRIRAVHSAISEAINHLHKSLESCPTEQTAAEDPSGLKVPLLLHQKQALAWLLW
RESQRPCGGILADDMGLGKTLTMIALVLVQKQLKTEKRKEKLEIWLSKSDSTVIPSNSTL
IICPASLIHHWKKEIDRHVACGKLRVYLYHGPNRDKHAEVLAEYDVVVTTYSLVSKEVPT
CKEEGEVPAEDHDVQGGSSPCSPLLRVAWARVILDEAHNIKNPKVQTSIAVCKLRAGARW
AITGTPIQNNLLDMYSLLRFLRCSPFDEYKVWKYQVDNNTRKGGERLSLLTRSLLLRRTK
DQLDSTGKPLVSLPQRSTQLHQLKLSAEEQSVYNVLFARSRSTLQSYLKRQEQKNEAREY
AGGNPFEKVAREFGVNQKELLAGSQSASQVSSTVHVLSMLLRLRQCCCHLSLLKVALDQV
NLNSEGLSLSIEEQLGALTLSELQAPDSKSMVYLNGTAFKTDIFEITRESTKISHLLAEL
RTIQSHSKSQKSVVVSQWTSMLKVVAVHLQRLGLKYATVDGSVNPKQRMDVVEEFNNNPK
GPQVMLVSLLAGGVGLNLTGGNHLFLLDMHWNPALEDQACDRIYRVGQQKDVVIHRFVCE
GTVEEKIVQLQKRKKVLAQQVLSGKGETFTKLTLADLKILFGI
NT seq
3373 nt
NT seq
+upstream
nt +downstream
nt
tattcctgcttctcactgcctgacccatgagggatgtctggtggagctgcaagtcnnnnn
nnnncagcaggacggagatgaataccagttgttttaccgatgccttaaaagtaaattgaa
tgggaagaaatggtgtggaagcatcccgtggcaggatccaaaagctaccaaagtgtcaaa
agccttagaatcccagcccagcactgcacctctcttcaaccccagtggccaaagaaatcc
cttcaaagtgatagacaagaattgtgaacaatcatcctggaaacaaattaagcaaggaaa
tggagagaaaacggaagcaaaaggagtaaaagcagagaaagagagcgtgctgatgtctca
tagagagaagaaatcaacttctgattccgccatagagaaggaacccctagaaaggctgaa
aactaaaatgaagccgtcgatggaaaagagtgatccggaactgaaggagagcacagtgcc
tgaatccaaacttggactttctgaaagtggtaaaggggaagacaccctttgggaggaaga
gaaatgtgatggtgttaccagggaatccaagaagtcctctgagtgtgtggagaaagagct
ggatgggagatcaaagctcatttcactgcatcttgaaaagcaaagtacagaggaggagca
gcctagagatgaaaccttaaaaagctgtggggttaaagaaaccagagagagagaatacac
tggtcataagaatggagaaatgaaactaatatctgaagaagatgtgatttcctccgcagc
accacagtcagcattgcaacacgctgccctgaagggaggagcagaggcagtgctgcccaa
gactcgaatcaggccagggctgggtcagcctgctgaggaaatctcgggcagtgacagcga
tgaaataggatttgtttgttcctcgttgggtaaaagtaaagctgagggactgcagtcaag
agagattccctcaggaaaatcaggaaaaaaannacaggagacatctttgctgggaactgc
agctttgcatcacatggaaagaccccaggaccctaaagctcttcataaccatctggtagt
ccagctgaagcagaaaaagagtacgttggctacagtgaacattcagctgctacctgataa
aggggaacggttattaaagcaggtgcaggatttggaagctgcagtcagtgctcttaacat
ttcaacagcagatactgttggaaaaggggaggatagcccaagcagcagctgccctgaaga
atctttccctaacccatttgacaggccagggggtacaaagctgataccgctaccgctcca
ggatcctgcagcaagaacctcttcaggctcacacagttacccctctgctgctgctacttt
ggcttctagtgaatattatggctgcaattttggaatgaactctggtgtgcagaatctgta
tggaggaagaatgacagaagaccgaatcagggctgtacacagtgccataagtgaggctat
taatcatctccacaaatctctagagtcctgtcctacagaacagacagcagctgaagatcc
ctctggattgaaggttccgctgctgttgcaccaaaaacaggcacttgcgtggctactctg
gagagagagtcagaggccgtgtggaggaattctggcggatgacatgggcttggggaagac
tctaacgatgattgctctcgttctggtccagaagcagctgaagacagagaagagaaagga
gaagttagaaatatggctgtccaaaagtgattctactgttatcccttccaacagcacttt
aatcatttgtcctgcatccttgatccatcactggaagaaagagattgacagacatgtggc
ctgtggcaaactgagggtctatttgtaccatgggccaaacagagataaacatgcagaggt
gctcgctgaatatgatgttgttgtcacaacctacagccttgtctccaaggaggttcccac
atgcaaagaggagggggaagtccctgctgaggaccatgatgtgcagggtgggtcatctcc
ctgttcccctctgctcagggtggcttgggctcgagttatattggatgaagctcacaacat
taaaaaccccaaagttcaaacctctatagctgtgtgcaaactgagagctggcgccaggtg
ggctatcactgggacgccgatacagaacaatttactggacatgtactctctcctgaggtt
tctacgttgctctccttttgatgaatacaaagtgtggaaataccaggtagataacaacac
aaggaaaggaggagagagactaagtctcttaaccaggagcctcttattacggagaactaa
ggaccagctggattcaactggcaagcccttggtatctctgccccagcgaagcacgcagtt
gcatcagttaaaactttctgcagaggagcagtctgtgtacaatgtgctctttgcaagatc
caggtcaacactacaatcctacctaaagagacaagagcagaaaaatgaagccagagagta
tgctggtggtaacccatttgagaaagttgcacgagagtttggggtcaaccaaaaggaact
tctagcaggatcccaaagtgcctcccaggtctccagtactgtgcatgtcttgtccatgct
gttgaggctccgtcagtgctgctgccatctctccttactgaaagtggctctggaccaagt
taacttgaacagcgaagggctttccctctccattgaggaacaacttggtgctttgaccct
atctgagcttcaggcgcctgattcaaagtcaatggtctacctcaatggcacagcttttaa
aacagatatctttgaaatcaccagggagagcaccaagatatctcacctcttggctgaact
gagaactattcagagtcactcaaagtctcagaaaagtgttgttgtctctcagtggacgag
tatgttgaaagttgtggctgtgcacctccagcggctggggctgaagtatgcaacagtgga
tggctctgtcaatcctaaacagagaatggatgtggtagaagagttcaataacaatcccaa
agggccccaggtaatgctggtctccttgctggctggaggtgttggcctgaacttgactgg
aggaaaccacctctttctccttgacatgcactggaatcctgctctcgaggaccaggcgtg
tgaccgcatttaccgagtggggcagcagaaggatgttgtgatacacaggttcgtctgtga
aggaacagtagaagaaaagattgtacagctccagaagaggaagaaagttcttgcccagca
ggtgctgtcaggcaaaggcgagaccttcactaagctcactctggctgacctcaaaattct
cttcggcatctaa
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