KEGG   Apaloderma vittatum (bar-tailed trogon): 104276591
Entry
104276591         CDS       T08559                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
avit  Apaloderma vittatum (bar-tailed trogon)
Pathway
avit03420  Nucleotide excision repair
avit04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:avit00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104276591 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104276591 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:avit04121]
    104276591 (CUL4B)
   03400 DNA repair and recombination proteins [BR:avit03400]
    104276591 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:avit04147]
    104276591 (CUL4B)
Ubiquitin system [BR:avit04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     104276591 (CUL4B)
DNA repair and recombination proteins [BR:avit03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104276591 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104276591 (CUL4B)
Exosome [BR:avit04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104276591 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 104276591
NCBI-ProteinID: XP_009871272
LinkDB
Position
Unknown
AA seq 887 aa
MFPTGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNSSNSNSEREEFDSISSCTSSP
SKNTSSSSSSVITTSSCSSSGVASSNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSPAA
SSQQQHQQQLKNKNLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKP
KLPENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICED
HIKAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWD
MGLELFRTHIISDQKVQNKTIDGILLLIERERSGEAIDRSLLRSLLSMLSDLQIYQDSFE
HRFLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEK
QLLGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIV
INPEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKY
VDSKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAE
KSMLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGY
WPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS
LFQTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGD
KFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSH
NLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgtttcccacaggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaacaccagcagcagctcctcctgcaagaagagaaagttaaataacagc
agcaacagcaattctgaaagagaagaatttgattccatttcttcctgcacctcttctcct
tccaaaaacacctcctcatcatcttcctctgtcatcaccacctcctcgtgctcctcctca
ggggttgcctcctctaaccatcacctccagaagaagctgcgctttgaggactccgtggat
tttattggactcgatgtgaagatggctgaagagtcgtcttcctcctcctctcctgctgcc
tcttctcaacagcagcaccaacaacagctcaaaaataaaaaccttttaatttcgtcagtg
gctgtggggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagtttt
gccaacagtaaacctggctctgcaaagaagttagtgatcaagaactttaaagataaaccc
aaattgcctgaaaactacacagatgaaacctggcaaaaattgaaagaagccgtagaagct
atccagaacagtacttcaattaaatacaatttagaggagctctatcaggctgttgaaaat
ctctgctcctacaagatttctgcaaacttgtacaaacagctgagacagatctgtgaagac
cacattaaagcacaaattcaccaattcagagaggattcattggatagtgtcctttttcta
aagaaaatagacaaatgttggcaagatcactgcagacaaatgattatgattagaagtatc
tttttgttcttggatcgaacttacgtgcttcagaattcaatgctgccatctatttgggat
atggggctagaattgttcagaactcatataatcagtgatcagaaggttcagaacaaaact
attgatggcattcttctgctgattgagagggaaagaagtggtgaggctattgataggagt
ttactgcgaagccttctaagcatgctttctgacttgcagatttatcaagactctttcgaa
catagattcttggaagagactaaccgcctatatgcagcagagggacagaggcttatgcag
gaacgagaggttccagaatatcttcaccatgtcaacaagcgcttggaagaagaagccgat
aggataatcacttacttagatcagagcacacagaagccactaattgctactgtagaaaag
caacttctaggtgaacatttaacagccattcttcagaaaggtttaaaccaccttcttgat
gaaaaccgaattcaagacctgtctcttctgtatcagttgttcagtcgtgtgagaggtgga
gtacaggttctcttgcaacactggattgagtacataaaggcgtttggtagcaccatagta
attaatccagaaaaagacaaaaccatggtccaagagctacttgattttaaagacaaagtt
gaccacattattgatgtttgctttctcaagaatgagaagtttgtaaatgccatgaaagaa
gcctttgaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaatat
gtagattcgaagcttcgtgcaggcaacaaagaagctactgatgaagaacttgaaaaaatg
ctggataaaattatgatcatatttagattcatatatggaaaagatgtctttgaggccttt
tataaaaaagatctagcaaagagactattagttgggaagagtgcatcagtagatgctgaa
aaatctatgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaacttgaa
ggaatgtttaaagatatggagctttcaaaagacataatgatacaatttaaacagtatatg
caaaatcagaatgtacctggcaacatcgaactaaccgtgaatattctgactatgggttat
tggccaacctacgtgcctatggaagtccatttgcccccagagatggtaaaactgcaggag
attttcaagaccttttatttaggaaaacacagtggtaggaaacttcagtggcagtcaaca
ctaggacattgtgtactaaaagcagaatttaaagagggcaaaaaagaacttcaggtctcc
ttgttccagacactggtgctgctcatgtttaatgaaggagaggagttcagtttagaggag
ataaagcaagccactgggatagaggacggagagctgagaaggacacttcaatctctggct
tgcggcaaagccagagtactgactaaaagccctaaaggcaaagatgtggaagatggtgat
aaattcacatgtaatgatgatttcagacataagctcttcaggataaagatcaaccaaatt
cagatgaaagaaacggtagaggaacaggcaagcactacagagagagtattccaggaccga
caataccagattgacgctgcaattgtacgaatcatgaagatgcgcaagacactgagtcat
aacctgcttgtgtcagaggtctacaaccagcttaaattcccagtaaagcctgctgacctt
aagaagagaatagaatccttaattgacagggactacatggaaagagataaagaaaacccg
aatcagtacaactatattgcataa

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