Apaloderma vittatum (bar-tailed trogon): 104276621
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Entry
104276621 CDS
T08559
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
avit03041
]
104276621 (DHX35)
Enzymes [BR:
avit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104276621 (DHX35)
Spliceosome [BR:
avit03041
]
Complex C
Other components
Complex C specific factors
104276621 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
Cas3-like_C_2
AAA_7
UPF0203
Motif
Other DBs
NCBI-GeneID:
104276621
NCBI-ProteinID:
XP_009871318
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MGQEATGKAEIRERHLKHGEKPFLLRRAQVLEQAVRQVVESSSGLDEGLRSTEGPGVSVS
EERQSPAESSGVTVIYNPYASLSIEQQRQKLPVFKLRNHILYLVENYQTLVIVGETGCGK
STQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRVADERGAVLGHEVGYCIRFDDCTD
PQATRIKFLTDGMLVREMMSDPLLTRYSVLMLDEAHERTLYTDIAIGLLKKVQKKRGDLR
LIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYLQSPVPDYIKSTVE
TAMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSSD
QMKVFERVSRSVRKVIVATNIAETSITIHGIAFVIDCGFVKLRAYNPKTAIECLVVVPVS
KASANQRAGRAGRNRSGKCYRLYTEEDFEKLPKSTVPEMQRSNLAPVILQLKALGIDNVL
RFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFG
CSQEILTIAAMMQIQNIFVIPPNQKAQAARQHRKFAVEEGDHLTMLNVYEAFVKHSKSSQ
WCQEHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSEGDPDPVLRCIVSGFFANAAKFHS
TGAYRTIRDDHELHIHPTSVLYAEKPPRWVVYNEVIQTAKYYMRDVTAVESAWLLELAPH
FYQQGTHLSLKAKRVKVDDH
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaagaggcaacgggcaaagctgaaatacgggaacgtcaccttaaacatggggag
aaacctttcctgctgcggcgtgctcaggttctggaacaagcagtcagacaggttgtggag
tcttcaagcgggctggacgagggcctgagaagcacggaaggtcctggtgtcagtgtctca
gaggagagacagagtcctgctgagagtagtggtgtaactgtcatctataatccctatgct
tccctttctattgaacaacaaagacaaaagctgcctgtttttaagctacgaaatcacata
ctttatctggtggagaactatcagactttggtgattgttggggaaacaggttgtgggaaa
tcaacacagattccacaatacctagcagaagctggctggacggccgaaggaagagttgtt
ggagtgacgcagcctcgtcgggtcgctgctgtttcagttgcaggccgagttgctgatgaa
agaggtgcggtgttggggcatgaggttggctattgtattcggtttgatgactgcacagat
ccacaggctacaagaattaagtttctaactgatggtatgctggtgagggagatgatgtca
gatcctttgttaacaagatacagtgtcctcatgctggatgaagcccatgaaaggacgctt
tatacagacattgccattggcttgctaaaaaaggttcaaaagaagcgtggggatcttcga
ctgattgtggcttcagccaccctggatgcagagaaattcagggatttctttaatcaaaat
gataccggtgaccccagcaaagataccagtgtgatccttactgttgaggggagaacgttt
ccagtggacatcttctacttacagagtcctgttccagactatataaaatcaactgtggaa
actgcaatgaaaattcaccagatggagaatgatggcgatatactggcatttttaactggc
caggaggaagtggagacagttgtttctatgctcatagaacaggctcgggccctttctcgc
actggaatgagaaagcacctccgtgtgctccccatgtacgccggactgccttcttctgac
caaatgaaagtgtttgagagagtttctcgcagtgtgaggaaggtgatcgtagccaccaac
attgctgagacttccatcacaattcacggaattgcatttgtaattgattgtggatttgtg
aagcttcgggcctataaccccaaaacagccatcgaatgtcttgtggtggtaccggtatct
aaagcttcagctaatcagagagcaggacgtgcgggacgtaaccgctctggaaaatgctac
agactttatacagaggaggactttgagaagctgccgaagtcaactgttcccgagatgcag
cgcagtaaccttgcccccgtcatcctgcagctgaaggctttgggaattgacaacgtgctc
aggttcccctttctctcaccacctccggcacagtcaatggtgcaagctctagagttgctc
tatgctttaggaggtttggatatgcactgccgtttaacggagcctctcggaatgagaata
gcagagttccctttgaatcctatgtttgcaaagatgcttctggaatcgggaaattttggc
tgctcccaggagattttgacaattgctgccatgatgcagattcaaaatatttttgtgatc
cctccaaatcaaaaagctcaggctgccagacaacaccgaaagtttgctgtggaggaaggt
gatcatctcactatgcttaatgtttatgaagcctttgtcaaacacagcaagagctctcag
tggtgtcaggaacactttctgaactacaaagggcttgttagagcttctgttgtgagagag
cagctgaaaaagcttctcgtccgctttaaagtgccaaaaaagtccagtgaaggtgatcca
gatcctgttttgagatgcatagtttctggattctttgctaatgcagctaaattccactct
actggagcatacaggactatccgtgatgaccatgaacttcatatccaccccacttcagtg
ctgtacgcagagaaacctccacgctgggtagtctacaatgaagtcatacagactgctaaa
tattacatgagagatgtgactgccgttgaatctgcgtggctcttggaactggcacctcat
ttttaccagcaaggaacgcacctttccttgaaagccaaaagggtcaaagtggatgaccac
tga
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