Apaloderma vittatum (bar-tailed trogon): 104276895
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Entry
104276895 CDS
T08559
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
avit
Apaloderma vittatum (bar-tailed trogon)
Brite
KEGG Orthology (KO) [BR:
avit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
avit01002
]
104276895
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
avit04121
]
104276895
Enzymes [BR:
avit01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104276895
Peptidases and inhibitors [BR:
avit01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104276895
Ubiquitin system [BR:
avit04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104276895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_UBL1
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
104276895
NCBI-ProteinID:
XP_009871662
LinkDB
All DBs
Position
Unknown
AA seq
1787 aa
AA seq
DB search
MDRCMPEAFKKLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPVGLLGVLTMA
FNPDNEYHFKNRMKVCQRNWAEVFGEGNMHAVSPISTFQKEPHGWLVDLVNRFAELGGFS
AIQSKLNSEDIELGAISALVQPFGVCAEYLNSSVVQPMLDPVIHKMIKYVQNVEEKDLKD
KRLVSIPELLSGIKLLCMRFQPDLVTAVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIE
DSTVSKSVKNAIDTDRLLNWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDEL
TKIWRIQSGQSSTVIENIHTIIAAAAVKFSSDQLNHLFVLIQKSWETESDRVRQKLLSLI
GRIGREARVETTTGKVLEVLWELAHLPTLPCSLIQQALEEHLTILSDAYAVKEAIKRSYI
IKCIEDIKRSSQHNNPQFVWVVPALRQLHEITRSFIKQTYQKQDKSIIQDLKKNFEIVKL
VTGSLISCHRLAASVAGPGGLVGATLVDGRYTYREYLEAHLKFLAFFLQEATLYLGWNRA
REIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITMNGFSL
FKTFFENVNLCDHRLKRQGTQLSVEKLELIGMDFIWKIAMESPDEEIANEAIQLIINYSY
INLTPRLKKDSVSLHKKFIADCYTRLEAASSALGGPTLTHAVTRATKMLTATAMPTVATS
VQSPYRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFHGHLLTLNVTYESTKD
TFTIEAHSNETVGSVRWKIAKMLNSPVDNIQIFANDSLLTVNKDQKLLHQLGFSDEQVLT
VKTSGSGTPSGSSADSSTSSSNSSSVFSSSYAMEQEKSLPGVVMALVCNVFDMLYQLANL
EEPRITLRVRKLLLLIPTDPAIQEALDQLDSLGRKKTLLSESSSQSSKSPSLSSKHQHQP
SASSILESLFRSFAPGMSTFRVLYNLEVLSSKLMPTADDEMARNCAKSFCENFLRAGGLS
LVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQTMPTLLDEDFIKDGVEALSSRP
FRNVSRQASRQMSICGTPEKSSYRQLSVSDRSSIRVEEIIPAARVAIQTMEVSDFTSTVA
CFMRLSWAAAAGRLDLVGSSQPIKESNTLFPAGIRNRLSSSGSNCSSGSEGEPTALHAGI
CVRQQSVSTKDALIAGEALSLLVTCLQLRSQQLGSFYNLPCVADFIIDILLGSPSAEIRR
VACDQLYTLSQTDTSAHPDVQKPNQFLLSVVLGAQLPLWSPTSIMRGINQRLLSQCTEYF
DLRCQLLDDLTSSEMEQLKISPAAMLEDEITWLDNFEPNRTAECETSEADNILLAGHLRL
IKTLLSLCGAEKEMVGSSLIKPLLDDFLFRASRIILNSHSPAGSAAISQQDFHPKCSTAD
SRLAAYEVLVMLADSSPSNLQLITKELLSMHHQCDPALTKEFDYLPPVDSRSISGFVGLK
NGGATCYMNAVFQQLYMQPGLPEALLSIDDDTDNPDDNVFYQVQSLFGHLMESKLQYYVP
ENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKIGRDQIFKNTFQGIFSDQKIC
KDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAYYCEKCKEKRTTVKRT
CIKVLPSLLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSSEVGDN
GRNADQGGGGSPRKKVAPTENYELVGVIVHSGQAHAGHYYSFIKDRR
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggacagatgcatgcctgaagcatttaaaaagctgctgacatccagtgcagttcacaaa
tggggaactgaaatccatgaagggatatacaacatgcttatgctgctggtagacctggtc
gcagaaagagtaaaacaagatcctattcctgtgggcctgcttggtgtacttacaatggca
ttcaaccccgacaatgaatatcatttcaagaatcgtatgaaggtttgccagaggaactgg
gcggaagtctttggggaggggaacatgcacgctgtctcgcccatatccacttttcagaag
gaacctcatgggtggctggtggatctggtaaacaggtttgcagagttgggtggattttca
gccattcagtccaaactcaactcagaagatattgaacttggggcaatctctgcgttagtc
cagccatttggagtttgtgcagaatatcttaactcttccgtagtacagcctatgctggat
ccagtcattcataaaatgattaaatatgtacagaatgtagaagagaaggacttgaaagac
aagagactagtcagtattcctgaactcttgtctggtatcaaactgctgtgtatgcgcttc
caacctgatttggtaaccgcggtagatgacttgcggctggacattctgttgcgcatgtta
aaatctcctcacttcagtgcaaaaatgaattccctcaaagaagtaacaaaattaatagaa
gacagcactgtatccaagtcggtgaagaatgcaatagatacagaccgattactaaattgg
ttagtagaaaattctgtcctgtcgattgctttagaaggcaatatagaccaagcgcaatac
tgtgatcgtataaagggaattattgaactgctgggcagtaaattatctttagatgagctc
actaaaatttggagaattcagtcgggacaatcctccactgtgattgaaaacatacatacc
attattgctgcagctgctgtgaagtttagttctgatcagctcaatcatttatttgtttta
atccaaaagagctgggagacagagagtgatcgagtgcgacagaaactgctgagcctgata
gggcgcatcggtcgagaagcacgggtggagacaaccactggaaaggttctggaggtgctt
tgggaacttgctcatcttccaacgttaccgtgtagtcttattcagcaggccttggaggaa
catctgacaatcctcagtgatgcctatgcagtgaaagaggcaatcaaaagaagctacatc
atcaaatgcatagaggatattaagaggtcgtcccagcacaataatcctcaatttgtatgg
gtggtgccagcattacgtcagctccatgaaatcacacgttcatttattaagcaaacttac
caaaaacaagacaagagcattattcaagatttaaagaaaaactttgaaatcgtgaaattg
gtgacaggaagcttaatatcatgccaccgtttggctgcgtctgtggcaggtccaggtgga
cttgttggagcgacgttagtggatgggcgatacacttaccgggagtatttggaggcgcat
ctaaaatttttggcattttttctgcaagaagccaccctttatttgggctggaatcgtgcc
agggagatctgggaatgccttgtaactggccaagatgtttgtgagttagatcgagagatg
tgctttgagtggtttacaaaaggacagcatgatctagagagcgatgtacagcaacagctc
ttcaaagagaaaattcttaaactggagtcatatgaaattactatgaatggttttagttta
tttaagactttctttgaaaatgtgaacctgtgtgaccatcgactgaagaggcaaggaact
caattgagtgtagaaaaactggaattaataggaatggatttcatttggaagattgcaatg
gagtcacctgatgaagaaattgccaatgaagctattcaattgatcataaattacagctat
attaatctaactcctagactaaaaaaggattcggtatcactgcacaagaaattcattgct
gattgctacacacgattagaggcagccagctctgcactcggtggtccgacattaacacat
gctgttacaagagctacaaaaatgcttacagcaactgctatgcctacagtagcaacatcg
gttcagtctccttacaggtcaactaaacttgtaataattgagagactgctgctgttggcg
gagcgctatgtgataaccatagaggacctatactctgttccccgaactattctacctcat
ggtgcctctttccatggacatcttttaacacttaatgttacatacgagtctaccaaagat
actttcaccatagaggctcatagcaatgaaaccgtagggagcgtcaggtggaagatagca
aagatgttgaattcgcctgtggataatatacagatatttgccaatgacagcctgctaact
gtaaacaaagatcaaaaactactccaccagctgggcttctctgatgaacaagtccttaca
gtgaaaacatcaggaagtgggactccatcagggagctctgcagattcctcaaccagttcc
agcaacagcagcagtgtgtttagttcctcctatgccatggaacaggagaaatccctccct
ggagtagtcatggctctcgtgtgcaatgtgtttgatatgctttaccagcttgccaatcta
gaggagccaaggataacactgcgagtgaggaagcttctgctcttgattcccactgaccca
gctattcaggaggctcttgatcagcttgattccctgggaaggaagaaaacgctgctatcg
gaatcaagttctcagtcttcaaaatcaccatccttgtcttcaaaacaccaacatcagccc
agtgctagttcaatactagaaagtcttttcagatcttttgctccaggcatgtcaaccttc
agagtgctctacaacttagaggtactgagctccaagctgatgccaactgcagatgatgaa
atggcaagaaactgtgccaagtctttctgtgaaaacttcctcagagcaggaggtttgagt
ttggtggtgaatgtcatgcagagagattccatcccctcagaagtagactatgaaacaaga
cagggagtttattccatctgcctgcaacttgcaaggttcttgcttgttggccagacaatg
cctaccttactggatgaggatttcattaaagatggggtagaagcattgtcttcgcgcccc
ttccggaatgtcagccgacaagccagcaggcaaatgtccatttgtggaacacctgagaag
tcatcgtaccgacagctctctgtgtctgatagatcctccattagggtagaagaaatcata
ccagcagcaagagttgccatacaaactatggaggtgagtgatttcacttccacagtggct
tgcttcatgcgactctcttgggctgctgctgcaggacgactagaccttgtgggaagtagt
cagccaataaaagagagcaacactttatttcctgctgggattcgtaacagacttagcagc
tcaggaagtaattgcagttcaggaagcgaaggagagccaactgctctgcacgctggtatc
tgtgtgaggcagcagtctgtatccaccaaagatgctctgattgctggagaagccttgtct
ctcttagtaacctgccttcagctacgcagtcaacaactaggatctttttacaatttgcct
tgtgttgctgatttcatcattgacatactgcttggatcaccaagtgctgagattcgtcgt
gttgcctgtgaccagttgtacacccttagtcaaacagacacgtcagctcacccagatgtg
caaaagccaaaccagtttctgctgagtgttgttcttggtgcccagctgcctctttggtca
ccaaccagcatcatgagaggaatcaaccagagacttctgtcccaatgtacagaatatttt
gacctgagatgtcagttgttggatgacctcacatcatcagaaatggaacagctaaagata
agcccagctgccatgttagaagatgagatcacctggctagacaattttgaacccaaccgc
acagccgagtgtgagactagtgaagctgataatatcttgttagccggtcacttgaggctt
atcaagactctcctttcactttgtggagcagagaaggaaatggttggttcttctttgatt
aagccattgttggatgatttcctcttccgagcatccaggattattctgaatagccattct
ccagcaggcagcgctgcaatcagtcagcaagactttcatccaaagtgcagcacagcagat
agccgattagctgcttatgaagtgttggtaatgctggctgatagctccccttccaatctt
cagcttattacaaaagagctactttccatgcatcaccaatgtgaccctgcacttaccaag
gagtttgattatcttccacctgtggatagtcgctccatttcgggatttgtgggactgaag
aacggtggtgctacttgttacatgaatgctgtcttccagcagctgtacatgcagcctggt
ctcccagaggccttgctttccattgacgatgatacagacaatccagatgacaatgttttc
tatcaagttcaatctctctttggccatttgatggaaagcaagctacagtactatgtaccc
gagaacttttggaagattttcaagatgtggaataaggaactttatgttagagagcaacag
gatgcttatgagttcttcaccagtcttatagatcaaatggatgagtacctcaagaaaata
ggaagagaccaaatatttaagaatacttttcaaggaatcttctctgatcagaagatctgc
aaggactgtcctcacaggtatgagcgtgaggaggccttcatggctcttaacctgggtgtg
acttcctgccaaagtctggaaatatcattggatcagtttgtcagaggggaagttctggaa
ggaagcaatgcatactactgcgaaaagtgcaaagaaaagagaactacagtgaagcgcaca
tgcatcaaggtcttacctagcctattggtgattcacctgatgagatttggttttgactgg
gagagtggacgctctattaaatatgatgaacaaataaggtttccctggatgctgaacatg
gaaccttacaccgtgtcagggatggctcgccaggactcatcctcagaagtgggggacaac
ggtagaaatgcagatcaaggaggcggaggctccccaaggaagaaagttgcccctacagaa
aactatgagctcgttggtgtgattgttcacagtggccaggcacatgcagggcactactac
tcctttataaaggacagaaggtaa
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integrated database retrieval system
