Apaloderma vittatum (bar-tailed trogon): 104276909 Help Entry 104276909         CDS       T08559                                  Symbol RFC1 Name (RefSeq) replication factor C subunit 1   KO K10754   replication factor C subunit 1 Organism avit  Apaloderma vittatum (bar-tailed trogon) Pathway avit03030   DNA replication avit03410   Base excision repair avit03420   Nucleotide excision repair avit03430   Mismatch repair Brite KEGG Orthology (KO) [BR:avit00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     104276909 (RFC1)    03410 Base excision repair     104276909 (RFC1)    03420 Nucleotide excision repair     104276909 (RFC1)    03430 Mismatch repair     104276909 (RFC1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:avit03032]     104276909 (RFC1)    03400 DNA repair and recombination proteins [BR:avit03400]     104276909 (RFC1) DNA replication proteins [BR:avit03032]  Eukaryotic type   DNA Replication Elongation Factors    RFC (replication factor C)     104276909 (RFC1) DNA repair and recombination proteins [BR:avit03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     RFC (replication factor C)      104276909 (RFC1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  RFC1 BRCT AAA PTCB-BRCT AAA_22 AAA_14 BRCT_2 AAA_5 AAA_30 Rad17 AAA_16 RuvB_N AAA_33 AAA_18 RNA_helicase AAA_17 AAA_7 nSTAND3 NTPase_1 AAA_19 Motif Other DBs NCBI-GeneID:  104276909 NCBI-ProteinID:  XP_009871686 LinkDB All DBs Position Unknown AA seq 1100 aa AA seqDB search LYICGGNLHLCCVQNTDSEEEVQSVKKSKKPSEKEAAPSKLGKVLKRDPVVYISETDEED DFVNRKITLKPKENGTSTIGHPETTAVKKEDVKPRDKSKPLSPVKQTPTSALDYFGTSSV QRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQLEEDSELERQLHEDEEFAKTLAMLDET PRKKKARKDSGGEQTASSIKSSPNVTERHKQSERAKATNSTSEAKNYAPKQQTKSEHSRG TRLSAQSSDGKIAGELMDKTLPLKPSSKLVSLKQKEEIAEKERGAQSSVSKEKTSSGKEE KITPKKEKISPKKTESVSPEDSEKRRINYQAYRSFLNREGPKALGSKEIPQGAENCLEGL TFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASTLGTKII DEDGLFDLIRTMPGKKSKYELVAETEAKKAESRPKKTPQKAEAERRNFSPFKRDADNKKK STPEKGDTVKSVKKGAAAVRKLMDCTQQAAEKTEAPKSKGSLASEINEDGTERLLWVDKY KPVSLKAVIGQQGEQSCANKLLRWLRNWHKNTSEDGQAKTNKTGGKDDGSGFKAALLSGP PGVGKTTTASLVCKELGYSYVELNASDTRSKSSLKEVVAESLNNTSIKDFCSGTSSSVSG KHVLIMDEVDGMAGNEDRGGIQELIALIRHTKIPIICMCNDRNHPKIRSLVHYCLDLRFQ RPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKALTYDEA KTDAGRAKKDIKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENYVHVK PAAAGGNLKKHLVLLSRAADSICDGDIVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYM SQFPVFPSWLGKFSSTGKHDRITQELAMHMSLRTRACKKTINMEYLSHLRDALVRPLEDF GADGVQEAVAFMDSYCLMKDDVENIMEISMWGGKPSPFSKLDPKVKAAFTRAYNKEAHLT PYSLYSIKTSKRQSGSALTLELNDEDMKMEENQSDEDEQDTIESDAMIKQKKVKSSKLPQ REKNEETTKKEGKRKEKTRH NT seq 3304 nt NT seq  +upstreamnt  +downstreamnt cctgtatatatgtggaggaaatctacatttatgttgtgttcaaaatacagattcagaaga ggaggtgcagtcagtgaaaaaatccaagaagccatctgagaaagaagcagctccttcaaa acttggtaaagttctaaagcgggatcctgttgtttatatttcagagacagatgaagagga tgactttgtcaatagaaaaattaccctgaagccaaaagagaatgggacgtccacgatcgg tcatccagaaacaactgcagtgaaaaaggaagatgtaaaaccacgagataaaagcaaacc attatctccagtgaaacagactcccacctcagcacttgattactttgggacaagtagtgt ccagcgatcagaaaagaaactggtagcaagtaaaaggaaagaaccttcacaaagcagaga cagcacactagatgatgaggccattgctaggcaactgcagcttgaagaagattcggagct ggagagacagctgcatgaagatgaagaatttgcaaaaaccttggccatgttggatgaaac accacggaagaaaaaggctcggaaagattcaggaggagagcaaacagcatcgagcatcaa gagcagtcctaatgtgacagaaagacataagcagtcagaaagagcgaaagcaacaaactc aacaagtgaagcaaagaattatgctccgaagcagcaaactaaatcagaacattcaagagg cactcgcttatctgcacagtcgtctgacggtaaaatagcaggagagctgatggataagac cttgcctttgaaacctagctctaagcttgtgtctctgaagcaaaaagaagagattgctga aaaggaaagaggtgctcaaagttcggtatcaaaagaaaaaacttcttcagggaaagaaga gaagataactccaaagaaggagaaaatttctcccaagaagaccgagtctgtaagtcctga ggactctgaaaagcggcgaatcaattatcaagcctacagaagcttccttaatcgtgaggg tccgaaagcgctgggttccaaagagatacctcagggagcggaaaactgtttggaaggcct gacatttgtaattacgggtgttctggagtgtattgaaagagatgaggccaagtctctgat tgaacgttacggaggaaaagtgactggaaatgtcagcaagaagacaaactatctggttat ggggcgagactgtggccaatctaaatgtgaaaaggcatcaactttagggacaaaaattat tgatgaggatggcctctttgatcttattcgaactatgccaggcaaaaagtccaaatacga gttggtggctgaaacagaggcaaagaaagcagagtcaagacctaaaaagacaccacagaa agctgaagctgagagaaggaattttagccccttcaaaagggatgctgataataaaaaaaa gtctactcctgaaaaaggagatactgtcaaatccgtgaagaaaggagctgcagctgttcg aaagctcatggactgtacacagcaggctgcagagaagacagaagccccaaaatctaaggg gagcttggcttctgagattaatgaagatgggactgagagattgctatgggtagataaata caagcctgtatctcttaaggcagtaattggacagcagggggagcaaagctgtgctaataa actacttcggtggctcagaaattggcacaagaatacctcggaagatggacaagcaaagac caataaaactggaggcaaagatgatggttctggttttaaagcagcattactttctggtcc acctggagttggtaaaactactacagcttctctggtttgtaaggagctgggatatagcta cgtggagctgaacgccagtgacacgcgcagtaagagcagtctgaaggaagtagttgctga atcacttaacaacaccagcatcaaagacttctgttctggcacatcctcatcagttagcgg gaaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaagacagaggagg gattcaggagctgattgctttgattagacatacaaagatacccatcatctgtatgtgtaa tgatcgaaaccatcctaaaattcgttccttggtccactactgtttggatcttcgttttca gagacctcgcctggaacagattaagggtgccatgatgtctattgcatttaaagaaggttt aaaaattccaccacctgctatgcaagagataatcctggcagcaaatcaggacattagaca ggttttacataatcttaatatgtggtgtgcaaaagataaagcattgacttatgatgaggc taaaacagatgctggtagagccaaaaaggatatcaaactgggtccttttgatgttgtccg gaaggtttttgctactggagaggaggcttctcgtatgtctcttatagacaaatcagatct tttcttccatgattattccctggcacctctctttgtccaggagaactatgtacacgtgaa accagctgctgccggaggaaatctgaaaaagcacttggtgctcttgagtagagcagctga tagtatatgcgacggtgatatagtggacagacagattcgtagcaagcaaaactggagtct tcttccaacacaggctatttatgccagtgttctccccggggagctgatgagaggttacat gtcccagtttcctgtctttcccagctggctggggaaattttcatccacaggcaaacacga tcgtatcactcaagaactggcaatgcacatgagtctcagaacccgggcgtgcaagaagac gataaatatggagtatttgtcccatttgcgggatgcgcttgtccggcccttggaagactt cggagcagatggtgtacaagaagctgtagcattcatggactcttactgcttgatgaaaga tgatgttgaaaatatcatggaaataagcatgtggggaggcaagcccagtcctttttcaaa gctggaccccaaggtcaaagcagcttttacacgtgcctacaacaaagaggcacatctcac accgtattcactgtattctatcaagacatctaaaaggcagtcaggatctgcgctgacctt ggaactgaatgatgaagacatgaagatggaagagaaccagtctgatgaggatgaacaaga cactattgaaagtgacgcaatgattaagcaaaaaaaagtgaagtcttccaagctgccaca aagagagaaaaatgaagaaacaacaaaaaaagaggggaaaagaaaagagaaaacaaggca ttaa

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